FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8967, 356 aa 1>>>pF1KB8967 356 - 356 aa - 356 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7190+/-0.000403; mu= 19.6564+/- 0.025 mean_var=92.9128+/-23.282, 0's: 0 Z-trim(110.5): 432 B-trim: 1018 in 1/49 Lambda= 0.133057 statistics sampled from 18351 (18860) to 18351 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.221), width: 16 Scan time: 7.550 The best scores are: opt bits E(85289) NP_001124382 (OMIM: 608379) C-C chemokine receptor ( 356) 2372 466.2 5e-131 NP_003956 (OMIM: 608379) C-C chemokine receptor-li ( 344) 2297 451.8 1e-126 XP_011532510 (OMIM: 608379) PREDICTED: C-C chemoki ( 344) 2297 451.8 1e-126 XP_011532511 (OMIM: 608379) PREDICTED: C-C chemoki ( 344) 2297 451.8 1e-126 XP_016862925 (OMIM: 608379) PREDICTED: C-C chemoki ( 344) 2297 451.8 1e-126 NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 870 177.9 3.1e-44 NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 870 177.9 3.1e-44 NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 861 176.1 1e-43 NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 849 173.8 5e-43 XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 849 173.8 5e-43 XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 849 173.8 5e-43 NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 849 173.8 5e-43 NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 849 173.9 5.2e-43 NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 849 173.9 5.2e-43 XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 849 173.9 5.5e-43 XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 849 173.9 5.5e-43 XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 837 171.5 2.5e-42 NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 837 171.5 2.5e-42 NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 830 170.2 6.5e-42 XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 692 143.7 6e-34 NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 692 143.7 6e-34 NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 635 132.8 1.2e-30 NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 580 122.2 1.9e-27 NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 577 121.6 2.6e-27 NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 577 121.6 2.6e-27 NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 577 121.6 2.6e-27 NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 558 118.0 3.5e-26 XP_011531593 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 476 102.2 1.8e-21 NP_006555 (OMIM: 605163) C-X-C chemokine receptor ( 342) 476 102.2 1.8e-21 XP_011531592 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 476 102.2 1.8e-21 XP_005264866 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 476 102.2 1.8e-21 NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 458 98.8 2e-20 NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 453 97.8 3.9e-20 NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 453 97.8 4e-20 NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 453 97.8 4e-20 NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 453 97.8 4e-20 NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 453 97.9 4e-20 NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 449 97.1 6.6e-20 NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 449 97.1 6.6e-20 NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 449 97.1 6.7e-20 XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 449 97.1 6.7e-20 NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 446 96.5 9.7e-20 NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 446 96.5 9.7e-20 NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 433 94.0 5.7e-19 NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 433 94.0 5.7e-19 NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 422 91.9 2.4e-18 XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 416 90.7 5.3e-18 XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 416 90.7 5.3e-18 NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 416 90.7 5.3e-18 NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 416 90.7 5.3e-18 >>NP_001124382 (OMIM: 608379) C-C chemokine receptor-lik (356 aa) initn: 2372 init1: 2372 opt: 2372 Z-score: 2473.4 bits: 466.2 E(85289): 5e-131 Smith-Waterman score: 2372; 99.7% identity (100.0% similar) in 356 aa overlap (1-356:1-356) 10 20 30 40 50 60 pF1KB8 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: NP_001 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI 250 260 270 280 290 300 310 320 330 340 350 pF1KB8 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV 310 320 330 340 350 >>NP_003956 (OMIM: 608379) C-C chemokine receptor-like 2 (344 aa) initn: 2297 init1: 2297 opt: 2297 Z-score: 2395.8 bits: 451.8 E(85289): 1e-126 Smith-Waterman score: 2297; 99.7% identity (100.0% similar) in 344 aa overlap (13-356:1-344) 10 20 30 40 50 60 pF1KB8 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV :::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV 10 20 30 40 70 80 90 100 110 120 pF1KB8 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: NP_003 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFV 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB8 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI 230 240 250 260 270 280 310 320 330 340 350 pF1KB8 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV 290 300 310 320 330 340 >>XP_011532510 (OMIM: 608379) PREDICTED: C-C chemokine r (344 aa) initn: 2297 init1: 2297 opt: 2297 Z-score: 2395.8 bits: 451.8 E(85289): 1e-126 Smith-Waterman score: 2297; 99.7% identity (100.0% similar) in 344 aa overlap (13-356:1-344) 10 20 30 40 50 60 pF1KB8 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV :::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV 10 20 30 40 70 80 90 100 110 120 pF1KB8 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_011 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFV 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB8 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI 230 240 250 260 270 280 310 320 330 340 350 pF1KB8 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV 290 300 310 320 330 340 >>XP_011532511 (OMIM: 608379) PREDICTED: C-C chemokine r (344 aa) initn: 2297 init1: 2297 opt: 2297 Z-score: 2395.8 bits: 451.8 E(85289): 1e-126 Smith-Waterman score: 2297; 99.7% identity (100.0% similar) in 344 aa overlap (13-356:1-344) 10 20 30 40 50 60 pF1KB8 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV :::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV 10 20 30 40 70 80 90 100 110 120 pF1KB8 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_011 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFV 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB8 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI 230 240 250 260 270 280 310 320 330 340 350 pF1KB8 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV 290 300 310 320 330 340 >>XP_016862925 (OMIM: 608379) PREDICTED: C-C chemokine r (344 aa) initn: 2297 init1: 2297 opt: 2297 Z-score: 2395.8 bits: 451.8 E(85289): 1e-126 Smith-Waterman score: 2297; 99.7% identity (100.0% similar) in 344 aa overlap (13-356:1-344) 10 20 30 40 50 60 pF1KB8 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV 10 20 30 40 70 80 90 100 110 120 pF1KB8 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAGGDPMCKILIG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_016 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEFV 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB8 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHITKLI 230 240 250 260 270 280 310 320 330 340 350 pF1KB8 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV 290 300 310 320 330 340 >>NP_000570 (OMIM: 601373,609532,610379,612522) C-C chem (352 aa) initn: 630 init1: 383 opt: 870 Z-score: 915.2 bits: 177.9 E(85289): 3.1e-44 Smith-Waterman score: 870; 44.2% identity (74.1% similar) in 301 aa overlap (37-328:17-313) 10 20 30 40 50 60 pF1KB8 LKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVL .: :.: ... ..:.:.: : : ::..: . NP_000 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFV 10 20 30 40 70 80 90 100 110 120 pF1KB8 DNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAG------GDPMCKILIG :.::.:::.. : :: . .:::::::.:.: ::::.::::: . :. ::..: : NP_000 GNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV :::.:..: :: :::..:::. .: . : : : :..:::..::.:..:.:: . NP_000 LYFIGFFSGIFFIILLTIDRYLAVVH-AVFALKARTVTFGVVTSVITWVVAVFASLPGII 110 120 130 140 150 160 190 200 210 220 230 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTL- . : : .: :. :. :. .. :::.: :::. : :::::..... : . ::: NP_000 FTRSQKEGLHYTCS-SHFPY--SQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KB8 --RFREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHIT : ...:. .:.:.::.:..:.::::::...:.::.: :.:..:.:: ::.....: NP_000 RCRNEKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVT 230 240 250 260 270 280 300 310 320 330 340 350 pF1KB8 KLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV . .. :::::::..:::. : .:: :. NP_000 ETLGMTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRS 290 300 310 320 330 340 NP_000 TGEQEISVGL 350 >>NP_001093638 (OMIM: 601373,609532,610379,612522) C-C c (352 aa) initn: 630 init1: 383 opt: 870 Z-score: 915.2 bits: 177.9 E(85289): 3.1e-44 Smith-Waterman score: 870; 44.2% identity (74.1% similar) in 301 aa overlap (37-328:17-313) 10 20 30 40 50 60 pF1KB8 LKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVL .: :.: ... ..:.:.: : : ::..: . NP_001 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFV 10 20 30 40 70 80 90 100 110 120 pF1KB8 DNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAG------GDPMCKILIG :.::.:::.. : :: . .:::::::.:.: ::::.::::: . :. ::..: : NP_001 GNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTG 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB8 LYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSARRRVPCGIITSVLAWVTAILATLPEYV :::.:..: :: :::..:::. .: . : : : :..:::..::.:..:.:: . NP_001 LYFIGFFSGIFFIILLTIDRYLAVVH-AVFALKARTVTFGVVTSVITWVVAVFASLPGII 110 120 130 140 150 160 190 200 210 220 230 pF1KB8 VYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLYVQMRKTL- . : : .: :. :. :. .. :::.: :::. : :::::..... : . ::: NP_001 FTRSQKEGLHYTCS-SHFPY--SQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KB8 --RFREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHIT : ...:. .:.:.::.:..:.::::::...:.::.: :.:..:.:: ::.....: NP_001 RCRNEKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVT 230 240 250 260 270 280 300 310 320 330 340 350 pF1KB8 KLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV . .. :::::::..:::. : .:: :. NP_001 ETLGMTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRS 290 300 310 320 330 340 NP_001 TGEQEISVGL 350 >>NP_001286 (OMIM: 601159) C-C chemokine receptor type 1 (355 aa) initn: 812 init1: 279 opt: 861 Z-score: 905.9 bits: 176.1 E(85289): 1e-43 Smith-Waterman score: 861; 43.6% identity (69.5% similar) in 321 aa overlap (20-330:4-319) 10 20 30 40 50 60 pF1KB8 MIYTRFLKGSLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAV :. : :.. .: :.: . .:..:::.: : : : NP_001 METPNTTEDYDTTTEFDYGDATPCQKVNERAFGAQLLPPLYSLV 10 20 30 40 70 80 90 100 110 pF1KB8 FVIGVLDNLLVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHAG-------GDP ::::.. :.::::.::.:: :: . .:::::::.:.: ::.::::: :: NP_001 FVIGLVGNILVVLVLVQYKRLKNMTSIYLLNLAISDLLFLFTLPFWIDYKLKDDWVFGDA 50 60 70 80 90 100 120 130 140 150 160 170 pF1KB8 MCKILIGLYFVGLYSETFFNCLLTVQRYLVFLHKGNFFSAR-RRVPCGIITSVLAWVTAI ::::: :.:..::::: :: :::..:::...: :. : : : :.:::.. :. :: NP_001 MCKILSGFYYTGLYSEIFFIILLTIDRYLAIVHA--VFALRARTVTFGVITSIIIWALAI 110 120 130 140 150 160 180 190 200 210 220 230 pF1KB8 LATLPEYVVYKPQMEDQKYKCAFSRTPFLPADETFWKHFLTLKMNISVLVLPLFIFTFLY ::..: : : : .. :.. . : : :: : .::.:. :::::... . : NP_001 LASMPGLYFSKTQWEFTHHTCSL-HFPHESLRE--WKLFQALKLNLFGLVLPLLVMIICY 170 180 190 200 210 240 250 260 270 280 290 pF1KB8 VQMRKTL--RFREQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNL . . : : : :.. . .:.:.::..:.:.:.:::.....:.:.. . .:..: .: NP_001 TGIIKILLRRPNEKKSKAVRLIFVIMIIFFLFWTPYNLTILISVFQDFLFTHECEQSRHL 220 230 240 250 260 270 300 310 320 330 340 350 pF1KB8 DKSVHITKLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEP : .:..:..:: ::::.::..:::. : ::: . :: : NP_001 DLAVQVTEVIAYTHCCVNPVIYAFVGERFRKYLRQLFHRRVAVHLVKWLPFLSVDRLERV 280 290 300 310 320 330 pF1KB8 DHSTEV NP_001 SSTSPSTGEHELSAGF 340 350 >>NP_847899 (OMIM: 601268) C-C chemokine receptor type 3 (355 aa) initn: 815 init1: 283 opt: 849 Z-score: 893.4 bits: 173.8 E(85289): 5e-43 Smith-Waterman score: 849; 44.9% identity (73.4% similar) in 301 aa overlap (40-328:24-317) 10 20 30 40 50 60 pF1KB8 SLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNL :.: :..:: ::.:: : : ::..:.: :. NP_847 MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 LVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHA--G-----GDPMCKILIGLY .::.::.::. :. . ::::::::.:.: ::.::::: : : : :::.: :.: NP_847 VVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFY 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB8 FVGLYSETFFNCLLTVQRYLVFLHKGNFFSAR-RRVPCGIITSVLAWVTAILATLPEYVV .::::: :: :::..:::...: :. : : : :.:::...: :.::.:::.. NP_847 HTGLYSEIFFIILLTIDRYLAIVHA--VFALRARTVTFGVITSIVTWGLAVLAALPEFIF 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB8 YKPQMEDQKYKCAFSRTPFLPADETF-WKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :. . .. : . . : : .. :.:: ::.:.: :::::..... :. . ::: NP_847 YETEELFEETLC----SALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTL- 180 190 200 210 220 250 260 270 280 290 pF1KB8 FR---EQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHIT .: ...:. ..:.:.::.::...:.:::.:..::... . .::. : .:: . .: NP_847 LRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVT 230 240 250 260 270 280 300 310 320 330 340 350 pF1KB8 KLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV ..:: .:::.::..:::. : ::: . :: NP_847 EVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSVSPST 290 300 310 320 330 340 NP_847 AEPELSIVF 350 >>XP_011531637 (OMIM: 601268) PREDICTED: C-C chemokine r (355 aa) initn: 815 init1: 283 opt: 849 Z-score: 893.4 bits: 173.8 E(85289): 5e-43 Smith-Waterman score: 849; 44.9% identity (73.4% similar) in 301 aa overlap (40-328:24-317) 10 20 30 40 50 60 pF1KB8 SLKMANYTLAPEDEYDVLIEGELESDEAEQCDKYDAQALSAQLVPSLCSAVFVIGVLDNL :.: :..:: ::.:: : : ::..:.: :. XP_011 MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNV 10 20 30 40 50 70 80 90 100 110 120 pF1KB8 LVVLILVKYKGLKRVENIYLLNLAVSNLCFLLTLPFWAHA--G-----GDPMCKILIGLY .::.::.::. :. . ::::::::.:.: ::.::::: : : : :::.: :.: XP_011 VVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFY 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB8 FVGLYSETFFNCLLTVQRYLVFLHKGNFFSAR-RRVPCGIITSVLAWVTAILATLPEYVV .::::: :: :::..:::...: :. : : : :.:::...: :.::.:::.. XP_011 HTGLYSEIFFIILLTIDRYLAIVHA--VFALRARTVTFGVITSIVTWGLAVLAALPEFIF 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB8 YKPQMEDQKYKCAFSRTPFLPADETF-WKHFLTLKMNISVLVLPLFIFTFLYVQMRKTLR :. . .. : . . : : .. :.:: ::.:.: :::::..... :. . ::: XP_011 YETEELFEETLC----SALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTL- 180 190 200 210 220 250 260 270 280 290 pF1KB8 FR---EQRYSLFKLVFAIMVVFLLMWAPYNIAFFLSTFKEHFSLSDCKSSYNLDKSVHIT .: ...:. ..:.:.::.::...:.:::.:..::... . .::. : .:: . .: XP_011 LRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVT 230 240 250 260 270 280 300 310 320 330 340 350 pF1KB8 KLIATTHCCINPLLYAFLDGTFSKYLCRCFHLRSNTPLQPRGQSAQGTSREEPDHSTEV ..:: .:::.::..:::. : ::: . :: XP_011 EVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSVSPST 290 300 310 320 330 340 XP_011 AEPELSIVF 350 356 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:58:29 2016 done: Sun Nov 6 10:58:30 2016 Total Scan time: 7.550 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]