FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3396, 1275 aa 1>>>pF1KE3396 1275 - 1275 aa - 1275 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.0067+/-0.00149; mu= -17.5760+/- 0.084 mean_var=472.4595+/-112.684, 0's: 0 Z-trim(104.3): 235 B-trim: 289 in 1/52 Lambda= 0.059005 statistics sampled from 7690 (7852) to 7690 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.587), E-opt: 0.2 (0.241), width: 16 Scan time: 4.530 The best scores are: opt bits E(32554) CCDS43071.1 ULK4 gene_id:54986|Hs108|chr3 (1275) 8256 719.9 1e-206 >>CCDS43071.1 ULK4 gene_id:54986|Hs108|chr3 (1275 aa) initn: 8256 init1: 8256 opt: 8256 Z-score: 3824.7 bits: 719.9 E(32554): 1e-206 Smith-Waterman score: 8256; 99.5% identity (100.0% similar) in 1275 aa overlap (1-1275:1-1275) 10 20 30 40 50 60 pF1KE3 MENFILYEEIGRGSKTVVYKGRRKGTINFVAILCTDKCKRPEITNWVRLTREIKHKNIVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MENFILYEEIGRGSKTVVYKGRRKGTINFVAILCTDKCKRPEITNWVRLTREIKHKNIVT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FHEWYETSNHLWLVVELCTGGSLKTVIAQDENLPEDVVREFGIDLISGLHHLHKLGILFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FHEWYETSNHLWLVVELCTGGSLKTVIAQDENLPEDVVREFGIDLISGLHHLHKLGILFC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DISPRKILLEGPGTLKFSNFCLAKVEGENLEEFFALVAAEEGGGDNGENVLKKSMKSRVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DISPRKILLEGPGTLKFSNFCLAKVEGENLEEFFALVAAEEGGGDNGENVLKKSMKSRVK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSPVYTAPEVVRGADFSISSDLWSLGCLLYEMFSGKPPFFSESISELTEKILCEDPLPPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GSPVYTAPEVVRGADFSISSDLWSLGCLLYEMFSGKPPFFSESISELTEKILCEDPLPPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 PKDSSRPKASSDFINLLDGLLQRDPQKRLTWTRLLQHSFWKKAFAGADQESSVEDLSLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PKDSSRPKASSDFINLLDGLLQRDPQKRLTWTRLLQHSFWKKAFAGADQESSVEDLSLSR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NTMECSGPQDSKELLQNSQSRQAKGHKSGQPLGHSFRLENPTEFRPKGTLEGQLNESMFL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: CCDS43 NTMECSGPQDSKELLQNSQSRQAKGHKSGQPLGHSFRLENPTEFRPKSTLEGQLNESMFL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LSSRPTPRTSTAVEVSPGEDMTHCSPQKTSPLTKITSGHLSQQDLESQMRELIYTDSDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LSSRPTPRTSTAVEVSPGEDMTHCSPQKTSPLTKITSGHLSQQDLESQMRELIYTDSDLV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 VTPIIDNPKIMKQPPVKFDAKILHLPTYSVDKLLFLKDQDWNDFLQQVCSQIDSTEKSMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VTPIIDNPKIMKQPPVKFDAKILHLPTYSVDKLLFLKDQDWNDFLQQVCSQIDSTEKSMG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 ASRAKLNLLCYLCVVAGHQEVATRLLHSPLFQLLIQHLRIAPNWDIRAKVAHVIGLLASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ASRAKLNLLCYLCVVAGHQEVATRLLHSPLFQLLIQHLRIAPNWDIRAKVAHVIGLLASH 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 TAELQENTPVVEAIVLLTELIRENFRNSRLKQCLLPTLGELIYLVATQEEKKKNPRECWA ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS43 TAELQENTPVVEAIVLLTELIRENFRNSKLKQCLLPTLGELIYLVATQEEKKKNPRECWA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 VPLAAYTVLMRCLREGEERVVNHMAAKIIENVCTTFSAQAQGFITGEIGPILWYLFRHST :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: CCDS43 VPLAAYTVLMRCLREGEERVVNHMAAKIIENVCTTFSAQSQGFITGEIGPILWYLFRHST 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 ADSLRITAVSALCRITRHSPTAFQNVIEKVGLNSVINSLASAICKVQQYMLTLFTAMLSC ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: CCDS43 ADSLRITAVSALCRITRHSPTAFQNVIEKVGLNSVINSLASAICKVQQYMLTLFAAMLSC 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 GIHLQRLIQEKGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREMLLLSCQARLVMYIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GIHLQRLIQEKGFVSTIIRLLDSPSTCIRAKAFLVLLYILIYNREMLLLSCQARLVMYIE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 RDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RDSRKTTPGKEQQSGNEYLSKCLDLLICHIVQELPRILGDILNSLANVSGRKHPSTVQVK 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 QLKMCLPLMPIVLHLVTSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTAS :::.::::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QLKLCLPLMPVVLHLVTSQVFRPQVVTEEFLFSYGTILSHIKSVDSGETNIDGAIGLTAS 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 EEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVEWRLFSLRLLSETTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EEFIKITLSAFEAIIQYPILLKDYRSTVVDYILPPLVSLVQSQNVEWRLFSLRLLSETTS 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 LLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LLVNQEFGDGKEKASVDSDSNLLALIRDVLLPQYEHILLEPDPVPAYALKLLVAMTEHNP 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 TFTRLVEESKLIPLIFEVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 TFTRLVEESKLIPLIFEVTLEHQESILGNTMQSVIALLSNLVACKDSNMELLYEQGLVSH 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 ICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIVRLALQAQKSGSGED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ICNLLTETATLCLDVDNKNNNEMAAPLLFSLLDILHSMLTYTSGIVRLALQAQKSGSGED 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE3 PQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PQAAEDLLLLNRPLTDLISLLIPLLPNEDPEIFDVSSKCLSILVQLYGGENPDSLSPENV 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE3 EIFAHLLTSKEDPKEQKLLLRILRRMITSNEKHLESLKNAGSLLRALERLAPGSGSFADS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EIFAHLLTSKEDPKEQKLLLRILRRMITSNEKHLESLKNAGSLLRALERLAPGSGSFADS 1210 1220 1230 1240 1250 1260 1270 pF1KE3 AVAPLALEILQAVGH ::::::::::::::: CCDS43 AVAPLALEILQAVGH 1270 1275 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 02:14:21 2016 done: Tue Nov 8 02:14:21 2016 Total Scan time: 4.530 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]