FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1643, 158 aa 1>>>pF1KE1643 158 - 158 aa - 158 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9550+/-0.000686; mu= 13.5244+/- 0.041 mean_var=56.1974+/-11.152, 0's: 0 Z-trim(108.5): 19 B-trim: 45 in 1/53 Lambda= 0.171087 statistics sampled from 10203 (10221) to 10203 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.314), width: 16 Scan time: 1.820 The best scores are: opt bits E(32554) CCDS42734.1 IL36A gene_id:27179|Hs108|chr2 ( 158) 1059 269.0 8.7e-73 CCDS2108.1 IL36G gene_id:56300|Hs108|chr2 ( 169) 616 159.6 7.6e-40 CCDS2110.1 IL36B gene_id:27177|Hs108|chr2 ( 157) 502 131.5 2.1e-31 CCDS62992.1 IL36G gene_id:56300|Hs108|chr2 ( 134) 481 126.3 6.7e-30 CCDS2107.1 IL37 gene_id:27178|Hs108|chr2 ( 192) 306 83.2 9.2e-17 CCDS2104.1 IL37 gene_id:27178|Hs108|chr2 ( 197) 306 83.2 9.4e-17 CCDS2103.1 IL37 gene_id:27178|Hs108|chr2 ( 218) 306 83.2 1e-16 CCDS2109.1 IL36B gene_id:27177|Hs108|chr2 ( 164) 266 73.2 7.5e-14 CCDS2111.1 IL36RN gene_id:26525|Hs108|chr2 ( 155) 245 68.0 2.6e-12 CCDS2115.1 IL1RN gene_id:3557|Hs108|chr2 ( 143) 235 65.6 1.3e-11 CCDS2113.1 IL1RN gene_id:3557|Hs108|chr2 ( 159) 235 65.6 1.5e-11 CCDS46396.1 IL1RN gene_id:3557|Hs108|chr2 ( 177) 235 65.6 1.6e-11 CCDS2114.1 IL1RN gene_id:3557|Hs108|chr2 ( 180) 235 65.6 1.6e-11 CCDS2112.1 IL1F10 gene_id:84639|Hs108|chr2 ( 152) 231 64.6 2.8e-11 >>CCDS42734.1 IL36A gene_id:27179|Hs108|chr2 (158 aa) initn: 1059 init1: 1059 opt: 1059 Z-score: 1420.2 bits: 269.0 E(32554): 8.7e-73 Smith-Waterman score: 1059; 99.4% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MEKALKIDTPQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES 70 80 90 100 110 120 130 140 150 pF1KE1 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF :::::::::::::::::::::::::::::::::::::: CCDS42 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF 130 140 150 >>CCDS2108.1 IL36G gene_id:56300|Hs108|chr2 (169 aa) initn: 617 init1: 561 opt: 616 Z-score: 828.8 bits: 159.6 E(32554): 7.6e-40 Smith-Waterman score: 616; 59.9% identity (87.8% similar) in 147 aa overlap (10-156:22-167) 10 20 30 40 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALIS : :.:.:.:..::.:: :.:.::::.: ..:::.:.:. CCDS21 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 CRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFY :.. :.::. ::.:::::... ..::.: :::.::::::::. :::::.:::::: :::: CCDS21 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY 70 80 90 100 110 120 110 120 130 140 150 pF1KE1 HSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF ....::.::.:::::: :::: ::. :.:::.::::. .: : :.. CCDS21 RAKTGRTSTLESVAFPDWFIA-SSKRDQPIILTSELGKSYNTAFELNIND 130 140 150 160 >>CCDS2110.1 IL36B gene_id:27177|Hs108|chr2 (157 aa) initn: 504 init1: 484 opt: 502 Z-score: 677.2 bits: 131.5 E(32554): 2.1e-31 Smith-Waterman score: 502; 49.0% identity (80.0% similar) in 145 aa overlap (10-154:9-153) 10 20 30 40 50 60 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG :. .:.: . ::::. ..:::.: . ..:::. ::.:: .: .:..: CCDS21 MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKG 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES : .:::..: .:::.::.. .::::::::.::::: . . : :::.:.. : .:.:.: CCDS21 NMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQS 60 70 80 90 100 110 130 140 150 pF1KE1 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF :..::::::.:. .: :..::.: : .:.:.: : CCDS21 VSYPGWFIATSTTSGQPIFLTKERGITNNTNFYLDSVE 120 130 140 150 >>CCDS62992.1 IL36G gene_id:56300|Hs108|chr2 (134 aa) initn: 482 init1: 426 opt: 481 Z-score: 650.3 bits: 126.3 E(32554): 6.7e-30 Smith-Waterman score: 481; 60.9% identity (87.8% similar) in 115 aa overlap (42-156:19-132) 20 30 40 50 60 70 pF1KE1 RGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLN .:.:.:.:.. :.::. ::.:::::... . CCDS62 MRGTPGDADGGGRAVYQSITVAVITCKYPEALEQGRGDPIYLGIQNPE 10 20 30 40 80 90 100 110 120 130 pF1KE1 LCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVS .::.: :::.::::::::. :::::.:::::: ::::....::.::.:::::: :::: : CCDS62 MCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIA-S 50 60 70 80 90 100 140 150 pF1KE1 SEGGCPLILTQELGKANTTDFGLTMLF :. :.:::.::::. .: : :.. CCDS62 SKRDQPIILTSELGKSYNTAFELNIND 110 120 130 >>CCDS2107.1 IL37 gene_id:27178|Hs108|chr2 (192 aa) initn: 271 init1: 105 opt: 306 Z-score: 414.4 bits: 83.2 E(32554): 9.2e-17 Smith-Waterman score: 306; 37.6% identity (67.1% similar) in 149 aa overlap (10-154:31-177) 10 20 30 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRM :.. ::.: .:.: ::.. .::::: :. . CCDS21 MSGCDRRETETKGKNSFKKRLRGPKVKNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYI 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 SP-VTIALISCRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQ--PTLQLKEKDIMDLY : . .:: : . :: :.:: ::.. ..::.: : : :.::::.. .: : CCDS21 RPEIFFALASSLSSASAEK--GSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLA 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 NQPEPVKS-FLFYHSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLT : : .. :.::..: : . .::.: ::::: .: . . :. .:... . . .:.. CCDS21 AQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 120 130 140 150 160 170 pF1KE1 MLF CCDS21 PVCKAEMSPSEVSD 180 190 >>CCDS2104.1 IL37 gene_id:27178|Hs108|chr2 (197 aa) initn: 271 init1: 105 opt: 306 Z-score: 414.3 bits: 83.2 E(32554): 9.4e-17 Smith-Waterman score: 306; 37.6% identity (67.1% similar) in 149 aa overlap (10-154:36-182) 10 20 30 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRM :.. ::.: .:.: ::.. .::::: :. . CCDS21 ENSGVKMGSEDWEKDEPQCCLEGPKVKNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYI 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 SP-VTIALISCRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQ--PTLQLKEKDIMDLY : . .:: : . :: :.:: ::.. ..::.: : : :.::::.. .: : CCDS21 RPEIFFALASSLSSASAEK--GSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLA 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 NQPEPVKS-FLFYHSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLT : : .. :.::..: : . .::.: ::::: .: . . :. .:... . . .:.. CCDS21 AQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 130 140 150 160 170 180 pF1KE1 MLF CCDS21 PVCKAEMSPSEVSD 190 >>CCDS2103.1 IL37 gene_id:27178|Hs108|chr2 (218 aa) initn: 271 init1: 105 opt: 306 Z-score: 413.6 bits: 83.2 E(32554): 1e-16 Smith-Waterman score: 306; 37.6% identity (67.1% similar) in 149 aa overlap (10-154:57-203) 10 20 30 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRM :.. ::.: .:.: ::.. .::::: :. . CCDS21 EDPAGSPLEPGPSLPTMNFVHTSPKVKNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYI 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 SP-VTIALISCRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQ--PTLQLKEKDIMDLY : . .:: : . :: :.:: ::.. ..::.: : : :.::::.. .: : CCDS21 RPEIFFALASSLSSASAEK--GSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLA 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE1 NQPEPVKS-FLFYHSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLT : : .. :.::..: : . .::.: ::::: .: . . :. .:... . . .:.. CCDS21 AQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 150 160 170 180 190 200 pF1KE1 MLF CCDS21 PVCKAEMSPSEVSD 210 >>CCDS2109.1 IL36B gene_id:27177|Hs108|chr2 (164 aa) initn: 248 init1: 248 opt: 266 Z-score: 362.1 bits: 73.2 E(32554): 7.5e-14 Smith-Waterman score: 266; 44.7% identity (76.5% similar) in 85 aa overlap (10-94:9-93) 10 20 30 40 50 60 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG :. .:.: . ::::. ..:::.: . ..:::. ::.:: .: .:..: CCDS21 MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKG 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES : .:::..: .:::.::.. .:::::: . .: CCDS21 NMVYLGIKGKDLCLFCAEIQGKPTLQLKLQGSQDNIGKDTCWKLVGIHTCINLDVRESCF 60 70 80 90 100 110 130 140 150 pF1KE1 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF CCDS21 MGTLDQWGIGVGRKKWKSSFQHHHLRKKDKDFSSMRTNIGMPGRM 120 130 140 150 160 >>CCDS2111.1 IL36RN gene_id:26525|Hs108|chr2 (155 aa) initn: 224 init1: 192 opt: 245 Z-score: 334.5 bits: 68.0 E(32554): 2.6e-12 Smith-Waterman score: 245; 44.8% identity (68.8% similar) in 96 aa overlap (61-152:55-149) 40 50 60 70 80 90 pF1KE1 IAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQPTLQLKEK .:. ::..: . :: :. ::..::: :. CCDS21 QLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCG-VGQEPTLTLEPV 30 40 50 60 70 80 100 110 120 130 140 pF1KE1 DIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQ--ELGKAN .::.:: . ::: ::. . : .:.:::.:.::::. . :. :. ::: : : : CCDS21 NIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQLPENGGWN 90 100 110 120 130 140 150 pF1KE1 T--TDFGLTMLF . ::: CCDS21 APITDFYFQQCD 150 >>CCDS2115.1 IL1RN gene_id:3557|Hs108|chr2 (143 aa) initn: 222 init1: 222 opt: 235 Z-score: 321.7 bits: 65.6 E(32554): 1.3e-11 Smith-Waterman score: 235; 33.1% identity (63.8% similar) in 127 aa overlap (15-141:6-125) 10 20 30 40 50 60 pF1KE1 MEKALKIDTPQRGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG : :.:.... :... :.: .. .. : : .: CCDS21 MQAFRIWDVNQKTFYLRNNQLVA----GYLQGPNVNLEEKIDVVPIEP--- 10 20 30 40 70 80 90 100 110 120 pF1KE1 NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES . ..::..: ..:: :.: ::. :::. .: :: .. . : : : .:.:: ...::: CCDS21 HALFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFES 50 60 70 80 90 100 130 140 150 pF1KE1 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF .: ::::. .. :. :. :: CCDS21 AACPGWFLCTAMEADQPVSLTNMPDEGVMVTKFYFQEDE 110 120 130 140 158 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:01:18 2016 done: Sun Nov 6 11:01:18 2016 Total Scan time: 1.820 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]