Result of FASTA (ccds) for pFN21AE1213
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1213, 136 aa
  1>>>pF1KE1213 136 - 136 aa - 136 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2551+/-0.000561; mu= 11.2228+/- 0.034
 mean_var=57.8996+/-11.423, 0's: 0 Z-trim(112.5): 24  B-trim: 0 in 0/50
 Lambda= 0.168553
 statistics sampled from 13196 (13220) to 13196 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.406), width:  16
 Scan time:  1.840

The best scores are:                                      opt bits E(32554)
CCDS42565.1 LGALS7B gene_id:653499|Hs108|chr19     ( 136)  930 233.4 3.2e-62
CCDS33012.1 LGALS7 gene_id:3963|Hs108|chr19        ( 136)  930 233.4 3.2e-62
CCDS12521.1 LGALS4 gene_id:3960|Hs108|chr19        ( 323)  364 96.0 1.9e-20
CCDS82093.1 LGALS9 gene_id:3965|Hs108|chr17        ( 246)  321 85.5 2.1e-17
CCDS32592.1 LGALS9 gene_id:3965|Hs108|chr17        ( 323)  321 85.5 2.6e-17
CCDS11222.1 LGALS9 gene_id:3965|Hs108|chr17        ( 355)  321 85.5 2.8e-17
CCDS41956.1 LGALS3 gene_id:3958|Hs108|chr14        ( 250)  318 84.7 3.5e-17
CCDS42283.1 LGALS9B gene_id:284194|Hs108|chr17     ( 355)  310 82.8 1.8e-16
CCDS32587.1 LGALS9C gene_id:654346|Hs108|chr17     ( 356)  310 82.8 1.8e-16
CCDS53648.1 LGALS12 gene_id:85329|Hs108|chr11      ( 327)  302 80.9 6.5e-16
CCDS8045.1 LGALS12 gene_id:85329|Hs108|chr11       ( 336)  302 80.9 6.7e-16
CCDS44633.1 LGALS12 gene_id:85329|Hs108|chr11      ( 337)  296 79.4 1.8e-15
CCDS1612.1 LGALS8 gene_id:3964|Hs108|chr1          ( 317)  276 74.6 5.1e-14
CCDS1611.1 LGALS8 gene_id:3964|Hs108|chr1          ( 359)  276 74.6 5.6e-14
CCDS44635.1 LGALS12 gene_id:85329|Hs108|chr11      ( 266)  273 73.8 7.2e-14
CCDS44634.1 LGALS12 gene_id:85329|Hs108|chr11      ( 275)  273 73.8 7.4e-14
CCDS13954.1 LGALS1 gene_id:3956|Hs108|chr22        ( 135)  244 66.6 5.2e-12


>>CCDS42565.1 LGALS7B gene_id:653499|Hs108|chr19          (136 aa)
 initn: 930 init1: 930 opt: 930  Z-score: 1230.6  bits: 233.4 E(32554): 3.2e-62
Smith-Waterman score: 930; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR
               70        80        90       100       110       120

              130      
pF1KE1 LVEVGGDVQLDSVRIF
       ::::::::::::::::
CCDS42 LVEVGGDVQLDSVRIF
              130      

>>CCDS33012.1 LGALS7 gene_id:3963|Hs108|chr19             (136 aa)
 initn: 930 init1: 930 opt: 930  Z-score: 1230.6  bits: 233.4 E(32554): 3.2e-62
Smith-Waterman score: 930; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR
               70        80        90       100       110       120

              130      
pF1KE1 LVEVGGDVQLDSVRIF
       ::::::::::::::::
CCDS33 LVEVGGDVQLDSVRIF
              130      

>>CCDS12521.1 LGALS4 gene_id:3960|Hs108|chr19             (323 aa)
 initn: 406 init1: 218 opt: 364  Z-score: 480.7  bits: 96.0 E(32554): 1.9e-20
Smith-Waterman score: 364; 39.7% identity (73.3% similar) in 131 aa overlap (4-133:17-147)

                            10        20        30        40       
pF1KE1              MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDA
                       .:. . .: :.  :  . :.:..  . .:: ::.. :.. :::.
CCDS12 MAYVPAPGYQPTYNPTLPYYQPIPGGLNVGMSVYIQGVASEHMKRFFVNFVVGQDPGSDV
               10        20        30        40        50        60

        50         60        70        80        90       100      
pF1KE1 ALHFNPRLDT-SEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQ
       :.:::::.:  ..::::. . :.:: :::  ..::..:  ::...:.  . .:.::.   
CCDS12 AFHFNPRFDGWDKVVFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYKVVVNGNP
               70        80        90       100       110       120

        110       120       130                                    
pF1KE1 YHHFRHRLPLARVRLVEVGGDVQLDSVRIF                              
       .... :::::  :  ..: ::.::.:.                                 
CCDS12 FYEYGHRLPLQMVTHLQVDGDLQLQSINFIGGQPLRPQGPPMMPPYPGPGHCHQQLNSLP
              130       140       150       160       170       180

>--
 initn: 264 init1: 108 opt: 266  Z-score: 352.0  bits: 72.1 E(32554): 2.8e-13
Smith-Waterman score: 266; 38.1% identity (61.9% similar) in 134 aa overlap (4-135:192-323)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     ::. . :  :.    .. :.: :::... :
CCDS12 MMPPYPGPGHCHQQLNSLPTMEGPPTFNPPVPYFGRLQGGLTARRTIIIKGYVPPTGKSF
             170       180       190       200       210       220 

            40        50        60        70         80        90  
pF1KE1 HVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG-PGVPFQRGQPFEVLII
        .:.  :  ...: :::.:::. .. :: ::  .:::: ::.     ::  :: :.. : 
CCDS12 AINFKVG--SSGDIALHINPRMGNGTVVRNSLLNGSWGSEEKKITHNPFGPGQFFDLSIR
               230       240       250       260       270         

            100       110        120       130      
pF1KE1 ASDDGFKAVVGDAQYHHFRHRLP-LARVRLVEVGGDVQLDSVRIF
        . : ::. ..  .   : :::  . ::  .:. ::: :. :.: 
CCDS12 CGLDRFKVYANGQHLFDFAHRLSAFQRVDTLEIQGDVTLSYVQI 
     280       290       300       310       320    

>>CCDS82093.1 LGALS9 gene_id:3965|Hs108|chr17             (246 aa)
 initn: 271 init1: 223 opt: 321  Z-score: 426.1  bits: 85.5 E(32554): 2.1e-17
Smith-Waterman score: 321; 37.1% identity (71.2% similar) in 132 aa overlap (4-133:15-145)

                          10        20         30        40        
pF1KE1            MSNVPHKSSLPEGIRPGTVLRIRGLV-PPNASRFHVNLLCGEEQGSDAA
                     :: ....  :.. :  . . : :   ...:: ::.  :  .:.: :
CCDS82 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGF-SGNDIA
               10        20        30        40        50          

       50         60        70        80        90       100       
pF1KE1 LHFNPRL-DTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQY
       .:::::. : . :: :....:::: :::   .:::.:.::.. ...... ::..:.   .
CCDS82 FHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILF
      60        70        80        90       100       110         

       110       120       130                                     
pF1KE1 HHFRHRLPLARVRLVEVGGDVQLDSVRIF                               
        .. ::.:. ::  . :.:.:::. .                                  
CCDS82 VQYFHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFSTP
     120       130       140       150       160       170         

>>CCDS32592.1 LGALS9 gene_id:3965|Hs108|chr17             (323 aa)
 initn: 311 init1: 223 opt: 321  Z-score: 424.2  bits: 85.5 E(32554): 2.6e-17
Smith-Waterman score: 321; 37.1% identity (71.2% similar) in 132 aa overlap (4-133:15-145)

                          10        20         30        40        
pF1KE1            MSNVPHKSSLPEGIRPGTVLRIRGLV-PPNASRFHVNLLCGEEQGSDAA
                     :: ....  :.. :  . . : :   ...:: ::.  :  .:.: :
CCDS32 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGF-SGNDIA
               10        20        30        40        50          

       50         60        70        80        90       100       
pF1KE1 LHFNPRL-DTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQY
       .:::::. : . :: :....:::: :::   .:::.:.::.. ...... ::..:.   .
CCDS32 FHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILF
      60        70        80        90       100       110         

       110       120       130                                     
pF1KE1 HHFRHRLPLARVRLVEVGGDVQLDSVRIF                               
        .. ::.:. ::  . :.:.:::. .                                  
CCDS32 VQYFHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFSTP
     120       130       140       150       160       170         

>--
 initn: 248 init1: 116 opt: 296  Z-score: 391.4  bits: 79.4 E(32554): 1.8e-15
Smith-Waterman score: 296; 38.8% identity (64.2% similar) in 134 aa overlap (4-134:193-322)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     .:  ...  :. :.  . . : : :.:.::
CCDS32 TVIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILLSGTVLPSAQRF
            170       180       190       200       210       220  

            40        50        60        70          80        90 
pF1KE1 HVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG-P-GVPFQRGQPFEVLI
       :.:: :.   :.  :.:.:::.: . :: :.. ..::: :::. :  .:: ::: : : :
CCDS32 HINL-CS---GNHIAFHLNPRFDENAVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSVWI
                230       240       250       260       270        

             100       110        120       130      
pF1KE1 IASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
       .     .:..:   .  .. :::  :  .  .:::::.::  :.  
CCDS32 LCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT 
      280       290       300       310       320    

>>CCDS11222.1 LGALS9 gene_id:3965|Hs108|chr17             (355 aa)
 initn: 311 init1: 223 opt: 321  Z-score: 423.6  bits: 85.5 E(32554): 2.8e-17
Smith-Waterman score: 321; 37.1% identity (71.2% similar) in 132 aa overlap (4-133:15-145)

                          10        20         30        40        
pF1KE1            MSNVPHKSSLPEGIRPGTVLRIRGLV-PPNASRFHVNLLCGEEQGSDAA
                     :: ....  :.. :  . . : :   ...:: ::.  :  .:.: :
CCDS11 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGF-SGNDIA
               10        20        30        40        50          

       50         60        70        80        90       100       
pF1KE1 LHFNPRL-DTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQY
       .:::::. : . :: :....:::: :::   .:::.:.::.. ...... ::..:.   .
CCDS11 FHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILF
      60        70        80        90       100       110         

       110       120       130                                     
pF1KE1 HHFRHRLPLARVRLVEVGGDVQLDSVRIF                               
        .. ::.:. ::  . :.:.:::. .                                  
CCDS11 VQYFHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPRGRRQ
     120       130       140       150       160       170         

>--
 initn: 238 init1: 116 opt: 296  Z-score: 390.7  bits: 79.4 E(32554): 1.9e-15
Smith-Waterman score: 296; 38.8% identity (64.2% similar) in 134 aa overlap (4-134:225-354)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     .:  ...  :. :.  . . : : :.:.::
CCDS11 TVIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILLSGTVLPSAQRF
          200       210       220       230       240       250    

            40        50        60        70          80        90 
pF1KE1 HVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG-P-GVPFQRGQPFEVLI
       :.:: :.   :.  :.:.:::.: . :: :.. ..::: :::. :  .:: ::: : : :
CCDS11 HINL-CS---GNHIAFHLNPRFDENAVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSVWI
           260          270       280       290       300       310

             100       110        120       130      
pF1KE1 IASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
       .     .:..:   .  .. :::  :  .  .:::::.::  :.  
CCDS11 LCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT 
              320       330       340       350      

>>CCDS41956.1 LGALS3 gene_id:3958|Hs108|chr14             (250 aa)
 initn: 260 init1: 152 opt: 318  Z-score: 422.1  bits: 84.7 E(32554): 3.5e-17
Smith-Waterman score: 318; 36.1% identity (69.9% similar) in 133 aa overlap (4-132:116-244)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     ::..  :: :. :  .. : : : :::.:.
CCDS41 PGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRI
          90       100       110       120       130       140     

            40        50           60        70        80        90
pF1KE1 HVNLLCGEEQGSDAALHFNPRLDTSE---VVFNSKEQGSWGREERGPGVPFQRGQPFEVL
        ...    ..:.:.:.:::::.. ..   .: :.: ...::::::    ::. :.::.. 
CCDS41 ALDF----QRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQ
             150       160       170       180       190       200 

              100       110        120       130        
pF1KE1 IIASDDGFKAVVGDAQYHHFRHRLP-LARVRLVEVGGDVQLDSVRIF  
       ...  : ::..:.::.  .. ::.  : ..  . ..::..: :      
CCDS41 VLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
             210       220       230       240       250

>>CCDS42283.1 LGALS9B gene_id:284194|Hs108|chr17          (355 aa)
 initn: 302 init1: 215 opt: 310  Z-score: 409.1  bits: 82.8 E(32554): 1.8e-16
Smith-Waterman score: 312; 40.3% identity (64.9% similar) in 134 aa overlap (4-134:225-354)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     .:  ...: :. :.  . . : : :.:.::
CCDS42 TVIHTVQSASGQMFSTPAIPPMMYPHPAYPMPFITTIPGGLYPSKSIILSGTVLPSAQRF
          200       210       220       230       240       250    

            40        50        60        70          80        90 
pF1KE1 HVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG-P-GVPFQRGQPFEVLI
       :.:: :.   ::  :.:.:::.: . :: :.. ..::: :::. :  .:: ::: : : :
CCDS42 HINL-CS---GSHIAFHMNPRFDENAVVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWI
           260          270       280       290       300       310

             100       110        120       130      
pF1KE1 IASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
       .     .:..:   .  .. :::  :  .  .:::::.::  :.  
CCDS42 LCEAHCLKVAVDGQHVFEYYHRLRNLPTINKLEVGGDIQLTHVQT 
              320       330       340       350      

>--
 initn: 302 init1: 215 opt: 310  Z-score: 409.1  bits: 82.8 E(32554): 1.8e-16
Smith-Waterman score: 310; 35.6% identity (71.2% similar) in 132 aa overlap (4-133:15-145)

                          10        20         30        40        
pF1KE1            MSNVPHKSSLPEGIRPGTVLRIRGLV-PPNASRFHVNLLCGEEQGSDAA
                     :: ....  :.. :  . . : :   ...:: :..  :  .:.: :
CCDS42 MAFSGSQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSSSGTRFAVDFQTGF-SGNDIA
               10        20        30        40        50          

       50         60        70        80        90       100       
pF1KE1 LHFNPRL-DTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQY
       .:::::. : . :: :....: :: :::   .:::.:.::.. ...... ::..:. . .
CCDS42 FHFNPRFEDGGYVVCNTRQKGRWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLF
      60        70        80        90       100       110         

       110       120       130                                     
pF1KE1 HHFRHRLPLARVRLVEVGGDVQLDSVRIF                               
        .. ::.:. ::  . :.:.:::. .                                  
CCDS42 VQYFHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPRGRRQ
     120       130       140       150       160       170         

>>CCDS32587.1 LGALS9C gene_id:654346|Hs108|chr17          (356 aa)
 initn: 305 init1: 218 opt: 310  Z-score: 409.1  bits: 82.8 E(32554): 1.8e-16
Smith-Waterman score: 312; 40.3% identity (64.9% similar) in 134 aa overlap (4-134:226-355)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     .:  ...: :. :.  . . : : :.:.::
CCDS32 VIHTVQSASGQMFSQTPAIPPMMYPHPAYPMPFITTIPGGLYPSKSIILSGTVLPSAQRF
         200       210       220       230       240       250     

            40        50        60        70          80        90 
pF1KE1 HVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG-P-GVPFQRGQPFEVLI
       :.:: :.   ::  :.:.:::.: . :: :.. ..::: :::. :  .:: ::: : : :
CCDS32 HINL-CS---GSHIAFHMNPRFDENAVVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWI
          260          270       280       290       300       310 

             100       110        120       130      
pF1KE1 IASDDGFKAVVGDAQYHHFRHRL-PLARVRLVEVGGDVQLDSVRIF
       .     .:..:   .  .. :::  :  .  .:::::.::  :.  
CCDS32 LCEAHCLKVAVDGQHVFEYYHRLRNLPTINKLEVGGDIQLTHVQT 
             320       330       340       350       

>--
 initn: 305 init1: 218 opt: 310  Z-score: 409.1  bits: 82.8 E(32554): 1.8e-16
Smith-Waterman score: 310; 35.6% identity (72.0% similar) in 132 aa overlap (4-133:15-145)

                          10        20         30        40        
pF1KE1            MSNVPHKSSLPEGIRPGTVLRIRGLVPP-NASRFHVNLLCGEEQGSDAA
                     :: ....  :.. :  . . : :   ...:: :..  :  .:.: :
CCDS32 MAFSGCQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSCSGTRFAVDFQTGF-SGNDIA
               10        20        30        40        50          

       50         60        70        80        90       100       
pF1KE1 LHFNPRL-DTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQY
       .:::::. : . :: :....:.:: :::   .:::.:.::.. ...... ::..:. . .
CCDS32 FHFNPRFEDGGYVVCNTRQKGTWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLF
      60        70        80        90       100       110         

       110       120       130                                     
pF1KE1 HHFRHRLPLARVRLVEVGGDVQLDSVRIF                               
        .. ::.:. ::  . :.:.:::. .                                  
CCDS32 VQYFHRVPFHRVDTISVNGSVQLSYISFQNPRAVPVQPAFSTVPFSQPVCFPPRPRGRRQ
     120       130       140       150       160       170         

>>CCDS53648.1 LGALS12 gene_id:85329|Hs108|chr11           (327 aa)
 initn: 305 init1: 144 opt: 302  Z-score: 399.2  bits: 80.9 E(32554): 6.5e-16
Smith-Waterman score: 302; 34.3% identity (67.9% similar) in 134 aa overlap (4-133:47-180)

                                          10        20        30   
pF1KE1                            MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRF
                                     ::. ...  :.. : .. ..:.:: .: ::
CCDS53 WSCPTVMSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQGVVPLDAHRF
         20        30        40        50        60        70      

            40          50          60        70        80         
pF1KE1 HVNLLCGEE--QGSDAALHFNPRLDTSE--VVFNSKEQGSWGREERGPGVPFQRGQPFEV
       .:.. ::       : :.:::::. :..  :. :. . : : :: : : . ..::. : .
CCDS53 QVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLI
         80        90       100       110       120       130      

      90       100       110       120       130                   
pF1KE1 LIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF             
       :.. ...  :. :.  .. :::.::::..:  . . ::. ...:                
CCDS53 LFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGFLNINPFVEGSREYP
        140       150       160       170       180       190      

CCDS53 AGHEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLRDQAAHAPVTLRASFADRTLAW
        200       210       220       230       240       250      




136 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 11:03:07 2016 done: Sun Nov  6 11:03:07 2016
 Total Scan time:  1.840 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com