FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5813, 926 aa 1>>>pF1KE5813 926 - 926 aa - 926 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3377+/-0.00105; mu= 12.0693+/- 0.063 mean_var=134.5735+/-26.407, 0's: 0 Z-trim(108.1): 26 B-trim: 45 in 1/50 Lambda= 0.110559 statistics sampled from 9975 (9993) to 9975 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.307), width: 16 Scan time: 2.950 The best scores are: opt bits E(32554) CCDS42179.1 KCTD19 gene_id:146212|Hs108|chr16 ( 926) 6284 1014.6 0 >>CCDS42179.1 KCTD19 gene_id:146212|Hs108|chr16 (926 aa) initn: 6284 init1: 6284 opt: 6284 Z-score: 5422.6 bits: 1014.6 E(32554): 0 Smith-Waterman score: 6284; 100.0% identity (100.0% similar) in 926 aa overlap (1-926:1-926) 10 20 30 40 50 60 pF1KE5 MEESGMAHESAEDLFHFNVGGWHFSVPRSKLSQFPDSLLWKEASALTSSESQRLFIDRDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MEESGMAHESAEDLFHFNVGGWHFSVPRSKLSQFPDSLLWKEASALTSSESQRLFIDRDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 STFRHVHYYLYTSKLSFSSCAELNLLYEQALGLQLMPLLQTLDNLKEGKHHLRVRPADLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 STFRHVHYYLYTSKLSFSSCAELNLLYEQALGLQLMPLLQTLDNLKEGKHHLRVRPADLP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 VAERASLNYWRTWKCISKPSEFPIKSPAFTGLHDKAPLGLMDTPLLDTEEEVHYCFLPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VAERASLNYWRTWKCISKPSEFPIKSPAFTGLHDKAPLGLMDTPLLDTEEEVHYCFLPLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LVAKYPSLVTEDNLLWLAETVALIECECSEFRFIVNFLRSQKILLPDNFSNIDVLEAEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LVAKYPSLVTEDNLLWLAETVALIECECSEFRFIVNFLRSQKILLPDNFSNIDVLEAEVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 ILEIPALTEAVRWYRMNMGGCSPTTCSPLSPGKGARTASLESVKPLYTMALGLLVKYPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ILEIPALTEAVRWYRMNMGGCSPTTCSPLSPGKGARTASLESVKPLYTMALGLLVKYPDS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ALGQLRIESTLDGSRLYITGNGVLFQHVKNWLGTCRLPLTETISEVYELCAFLDKRDITY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ALGQLRIESTLDGSRLYITGNGVLFQHVKNWLGTCRLPLTETISEVYELCAFLDKRDITY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 EPIKVALKTHLEPRTLAPMDVLNEWTAEITVYSPQQIIKVYVGSHWYATTLQTLLKYPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EPIKVALKTHLEPRTLAPMDVLNEWTAEITVYSPQQIIKVYVGSHWYATTLQTLLKYPEL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LSNPQRVYWITYGQTLLIHGDGQMFRHILNFLRLGKLFLPSEFKEWPLFCQEVEEYHIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LSNPQRVYWITYGQTLLIHGDGQMFRHILNFLRLGKLFLPSEFKEWPLFCQEVEEYHIPS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 LSEALAQCEAYKSWTQEKESENEEAFSIRRLHVVTEGPGSLVEFSRDTKETTAYMPVDFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LSEALAQCEAYKSWTQEKESENEEAFSIRRLHVVTEGPGSLVEFSRDTKETTAYMPVDFE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 DCSDRTPWNKAKGNLVRSNQMDEAEQYTRPIQVSLCRNAKRAGNPSTYSHCRGLCTNPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 DCSDRTPWNKAKGNLVRSNQMDEAEQYTRPIQVSLCRNAKRAGNPSTYSHCRGLCTNPGH 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 WGSHPESPPKKKCTTINLTQKSETKDPPATPMQKLISLVREWDMVNCKQWEFQPLTATRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 WGSHPESPPKKKCTTINLTQKSETKDPPATPMQKLISLVREWDMVNCKQWEFQPLTATRS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 SPLEEATLQLPLGSEAASQPSTSAAWKAHSTASEKDPGPQAGAGAGAKDKGPEPTFKPYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SPLEEATLQLPLGSEAASQPSTSAAWKAHSTASEKDPGPQAGAGAGAKDKGPEPTFKPYL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 PPKRAGTLKDWSKQRTKERESPAPEQPLPEASEVDSLGVILKVTHPPVVGSDGFCMFFED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PPKRAGTLKDWSKQRTKERESPAPEQPLPEASEVDSLGVILKVTHPPVVGSDGFCMFFED 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 SIIYTTEMDNLRHTTPTASPQPQEVTFLSFSLSWEEMFYAQKCHCFLADIIMDSIRQKDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SIIYTTEMDNLRHTTPTASPQPQEVTFLSFSLSWEEMFYAQKCHCFLADIIMDSIRQKDP 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 KAITAKVVSLANRLWTLHISPKQFVVDLLAITGFKDDRHTQERLYSWVELTLPFARKYGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KAITAKVVSLANRLWTLHISPKQFVVDLLAITGFKDDRHTQERLYSWVELTLPFARKYGR 850 860 870 880 890 900 910 920 pF1KE5 CMDLLIQRGLSRSVSYSILGKYLQED :::::::::::::::::::::::::: CCDS42 CMDLLIQRGLSRSVSYSILGKYLQED 910 920 926 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:51:28 2016 done: Tue Nov 8 06:51:29 2016 Total Scan time: 2.950 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]