FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5685, 561 aa 1>>>pF1KE5685 561 - 561 aa - 561 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6556+/-0.000838; mu= 13.0399+/- 0.051 mean_var=114.1531+/-23.070, 0's: 0 Z-trim(110.9): 26 B-trim: 0 in 0/51 Lambda= 0.120041 statistics sampled from 11933 (11953) to 11933 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.367), width: 16 Scan time: 2.300 The best scores are: opt bits E(32554) CCDS45329.2 CPEB1 gene_id:64506|Hs108|chr15 ( 561) 3887 684.1 1.2e-196 CCDS45330.2 CPEB1 gene_id:64506|Hs108|chr15 ( 486) 3372 594.9 7.2e-170 CCDS42072.2 CPEB1 gene_id:64506|Hs108|chr15 ( 491) 3352 591.5 8.1e-169 CCDS83044.1 CPEB4 gene_id:80315|Hs108|chr5 ( 322) 742 139.3 6.7e-33 CCDS83043.1 CPEB4 gene_id:80315|Hs108|chr5 ( 339) 742 139.3 7e-33 CCDS53553.1 CPEB3 gene_id:22849|Hs108|chr10 ( 684) 744 139.9 9.7e-33 CCDS31246.1 CPEB3 gene_id:22849|Hs108|chr10 ( 698) 744 139.9 9.8e-33 CCDS78087.1 CPEB4 gene_id:80315|Hs108|chr5 ( 704) 742 139.6 1.3e-32 CCDS78086.1 CPEB4 gene_id:80315|Hs108|chr5 ( 712) 742 139.6 1.3e-32 CCDS4390.1 CPEB4 gene_id:80315|Hs108|chr5 ( 729) 742 139.6 1.3e-32 CCDS56326.1 CPEB2 gene_id:132864|Hs108|chr4 (1007) 735 138.4 3.9e-32 CCDS56325.1 CPEB2 gene_id:132864|Hs108|chr4 (1034) 735 138.5 4e-32 >>CCDS45329.2 CPEB1 gene_id:64506|Hs108|chr15 (561 aa) initn: 3887 init1: 3887 opt: 3887 Z-score: 3644.2 bits: 684.1 E(32554): 1.2e-196 Smith-Waterman score: 3887; 100.0% identity (100.0% similar) in 561 aa overlap (1-561:1-561) 10 20 30 40 50 60 pF1KE5 MAFPLEEEAGRIKDCWDNQEAPALSTCSNANIFRRINAILDNSLDFSRVCTTPINRGIHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MAFPLEEEAGRIKDCWDNQEAPALSTCSNANIFRRINAILDNSLDFSRVCTTPINRGIHD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 HLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 HLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 QSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 AAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 FELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 KAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRH 490 500 510 520 530 540 550 560 pF1KE5 SMEGLRHHSPLMRNQKNRDSS ::::::::::::::::::::: CCDS45 SMEGLRHHSPLMRNQKNRDSS 550 560 >>CCDS45330.2 CPEB1 gene_id:64506|Hs108|chr15 (486 aa) initn: 3372 init1: 3372 opt: 3372 Z-score: 3163.1 bits: 594.9 E(32554): 7.2e-170 Smith-Waterman score: 3372; 100.0% identity (100.0% similar) in 486 aa overlap (76-561:1-486) 50 60 70 80 90 100 pF1KE5 FSRVCTTPINRGIHDHLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLT :::::::::::::::::::::::::::::: CCDS45 MLFPTSAQESSRGLPDANDLCLGLQSLSLT 10 20 30 110 120 130 140 150 160 pF1KE5 GWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSV 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE5 RGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPL 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE5 KMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQA 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE5 AAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKD 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE5 GKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIP 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE5 WVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 WVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYP 340 350 360 370 380 390 470 480 490 500 510 520 pF1KE5 IGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 IGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQ 400 410 420 430 440 450 530 540 550 560 pF1KE5 VCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS :::::::::::::::::::::::::::::::::::: CCDS45 VCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS 460 470 480 >>CCDS42072.2 CPEB1 gene_id:64506|Hs108|chr15 (491 aa) initn: 1942 init1: 1942 opt: 3352 Z-score: 3144.3 bits: 591.5 E(32554): 8.1e-169 Smith-Waterman score: 3352; 99.0% identity (99.0% similar) in 491 aa overlap (76-561:1-491) 50 60 70 80 90 100 pF1KE5 FSRVCTTPINRGIHDHLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQSLSLT :::::::::::::::::::::::::::::: CCDS42 MLFPTSAQESSRGLPDANDLCLGLQSLSLT 10 20 30 110 120 130 140 150 160 pF1KE5 GWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLSFLPLDPLGSDLVDKFPAPSV 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE5 RGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLSLSGGGPRDPL 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE5 KMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQA 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE5 AAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 AAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKD 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE5 GKHPRCPPKG-----YVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKE :::::::::: ::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GKHPRCPPKGNMPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKE 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE5 VQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTD 340 350 360 370 380 390 470 480 490 500 510 520 pF1KE5 KHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPF 400 410 420 430 440 450 530 540 550 560 pF1KE5 FCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS ::::::::::::::::::::::::::::::::::::::::: CCDS42 FCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS 460 470 480 490 >>CCDS83044.1 CPEB4 gene_id:80315|Hs108|chr5 (322 aa) initn: 728 init1: 238 opt: 742 Z-score: 704.1 bits: 139.3 E(32554): 6.7e-33 Smith-Waterman score: 742; 44.7% identity (70.8% similar) in 257 aa overlap (309-558:63-313) 280 290 300 310 320 330 pF1KE5 ARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLS :: :::.::.: :: : .. .:: :: : CCDS83 LDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLI 40 50 60 70 80 90 340 350 360 370 380 390 pF1KE5 VEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC :.:: : .. :::::..:.:. :.::..:..:: . :: . :. .:: .. CCDS83 VDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDAC----IEEDG--KLYLCVSSPTIKD 100 110 120 130 140 400 410 420 430 440 450 pF1KE5 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID : ::. :: :.::.:: . :: ::: .:.:::.. : : :: :.. :.::: ::::: CCDS83 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 150 160 170 180 190 200 460 470 480 490 500 510 pF1KE5 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCHICSS- :: . ::: :.:::.:.::.::. :.:: ::... .. :.:.. :: :.:.:: :.. CCDS83 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGA 210 220 230 240 250 260 520 530 540 550 560 pF1KE5 ----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS . .:::: . .:..:.:. :: :: : . :.::... .: CCDS83 RCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN 270 280 290 300 310 320 >>CCDS83043.1 CPEB4 gene_id:80315|Hs108|chr5 (339 aa) initn: 728 init1: 238 opt: 742 Z-score: 703.8 bits: 139.3 E(32554): 7e-33 Smith-Waterman score: 742; 44.7% identity (70.8% similar) in 257 aa overlap (309-558:80-330) 280 290 300 310 320 330 pF1KE5 ARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLS :: :::.::.: :: : .. .:: :: : CCDS83 LDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLI 50 60 70 80 90 100 340 350 360 370 380 390 pF1KE5 VEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC :.:: : .. :::::..:.:. :.::..:..:: . :: . :. .:: .. CCDS83 VDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDAC----IEEDG--KLYLCVSSPTIKD 110 120 130 140 150 160 400 410 420 430 440 450 pF1KE5 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID : ::. :: :.::.:: . :: ::: .:.:::.. : : :: :.. :.::: ::::: CCDS83 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 170 180 190 200 210 220 460 470 480 490 500 510 pF1KE5 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCHICSS- :: . ::: :.:::.:.::.::. :.:: ::... .. :.:.. :: :.:.:: :.. CCDS83 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGA 230 240 250 260 270 280 520 530 540 550 560 pF1KE5 ----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS . .:::: . .:..:.:. :: :: : . :.::... .: CCDS83 RCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN 290 300 310 320 330 >>CCDS53553.1 CPEB3 gene_id:22849|Hs108|chr10 (684 aa) initn: 756 init1: 238 opt: 744 Z-score: 701.3 bits: 139.9 E(32554): 9.7e-33 Smith-Waterman score: 744; 44.7% identity (70.8% similar) in 257 aa overlap (309-558:425-675) 280 290 300 310 320 330 pF1KE5 ARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLS :: :::.::.: :: : .. .:: :: : CCDS53 AFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLV 400 410 420 430 440 450 340 350 360 370 380 390 pF1KE5 VEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC :.:: : .. :::::..:.:. :.::..:..:: : :: . :. .:: .. CCDS53 VDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDAC----LEEDG--KLYLCVSSPTIKD 460 470 480 490 500 400 410 420 430 440 450 pF1KE5 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID : ::. :: :.::.:: . :: ::: .:.:::.. : : :: :.. :.::: ::::: CCDS53 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 510 520 530 540 550 560 460 470 480 490 500 510 pF1KE5 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCHICSS- :: . ::: :.:::.:.::.::. :.:: ::... . . :.:.. :: :.:..: :.. CCDS53 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGT 570 580 590 600 610 620 520 530 540 550 560 pF1KE5 ----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS . .:::: . .:..:.:. :: :: : . :.::... .: CCDS53 RCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 630 640 650 660 670 680 >>CCDS31246.1 CPEB3 gene_id:22849|Hs108|chr10 (698 aa) initn: 756 init1: 238 opt: 744 Z-score: 701.2 bits: 139.9 E(32554): 9.8e-33 Smith-Waterman score: 744; 44.7% identity (70.8% similar) in 257 aa overlap (309-558:439-689) 280 290 300 310 320 330 pF1KE5 ARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLS :: :::.::.: :: : .. .:: :: : CCDS31 AFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLV 410 420 430 440 450 460 340 350 360 370 380 390 pF1KE5 VEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC :.:: : .. :::::..:.:. :.::..:..:: : :: . :. .:: .. CCDS31 VDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDAC----LEEDG--KLYLCVSSPTIKD 470 480 490 500 510 520 400 410 420 430 440 450 pF1KE5 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID : ::. :: :.::.:: . :: ::: .:.:::.. : : :: :.. :.::: ::::: CCDS31 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 530 540 550 560 570 580 460 470 480 490 500 510 pF1KE5 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCHICSS- :: . ::: :.:::.:.::.::. :.:: ::... . . :.:.. :: :.:..: :.. CCDS31 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGT 590 600 610 620 630 640 520 530 540 550 560 pF1KE5 ----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS . .:::: . .:..:.:. :: :: : . :.::... .: CCDS31 RCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS 650 660 670 680 690 >>CCDS78087.1 CPEB4 gene_id:80315|Hs108|chr5 (704 aa) initn: 773 init1: 238 opt: 742 Z-score: 699.2 bits: 139.6 E(32554): 1.3e-32 Smith-Waterman score: 754; 34.7% identity (57.9% similar) in 461 aa overlap (142-558:259-695) 120 130 140 150 160 pF1KE5 STQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLS-----FLPLDPLGSDLVDKFPAPSVR ::.. : : :...: .: :.: CCDS78 LSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNL-NKPPSP--W 230 240 250 260 270 280 170 180 190 200 210 220 pF1KE5 GSRLDTRPILDSRSSSPSDSDTSGF--SSGSDHLSDLISSLRISPPLPFLSLSGGGPRDP .: . : : : ::. . .:. :.: :: : ... :. :.: : CCDS78 SSYQSPSPT-PSSSWSPGGGGYGGWGGSQGRDHRRGLNGGIT-----PLNSIS------P 290 300 310 320 330 230 240 250 260 270 280 pF1KE5 LKMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIER---EARL :: . .: : : . :: . : : : :. . ... : : ... :. : CCDS78 LKKNFASNHIQLQK---YARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSL 340 350 360 370 380 390 290 300 310 pF1KE5 HRQAAAVNEATCTWSGQLP---------------------PRNYKNPI------YSCKVF : :.. :. .: :. ... :: ::: CCDS78 IDIMRAENDTIKGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVF 400 410 420 430 440 450 320 330 340 350 360 370 pF1KE5 LGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQAC .::.: :: : .. .:: :: : :.:: : .. :::::..:.:. :.::..:..:: CCDS78 VGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDAC 460 470 480 490 500 510 380 390 400 410 420 430 pF1KE5 SHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHG . :: . :. .:: .. : ::. :: :.::.:: . :: ::: .:.:::.. CCDS78 ----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR 520 530 540 550 560 440 450 460 470 480 490 pF1KE5 MLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTT : : :: :.. :.::: ::::::: . ::: :.:::.:.::.::. :.:: ::... CCDS78 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG 570 580 590 600 610 620 500 510 520 530 540 pF1KE5 KFTKKVQIDPY-LEDSLCHICSS-----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRH .. :.:.. :: :.:.:: :.. . .:::: . .:..:.:. :: :: : . CCDS78 EIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREF 630 640 650 660 670 680 550 560 pF1KE5 HSPLMRNQKNRDSS :.::... .: CCDS78 HKPLVKEGGDRPRHISFRWN 690 700 >>CCDS78086.1 CPEB4 gene_id:80315|Hs108|chr5 (712 aa) initn: 773 init1: 238 opt: 742 Z-score: 699.2 bits: 139.6 E(32554): 1.3e-32 Smith-Waterman score: 742; 44.7% identity (70.8% similar) in 257 aa overlap (309-558:453-703) 280 290 300 310 320 330 pF1KE5 ARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLS :: :::.::.: :: : .. .:: :: : CCDS78 LDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLI 430 440 450 460 470 480 340 350 360 370 380 390 pF1KE5 VEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC :.:: : .. :::::..:.:. :.::..:..:: . :: . :. .:: .. CCDS78 VDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDAC----IEEDG--KLYLCVSSPTIKD 490 500 510 520 530 400 410 420 430 440 450 pF1KE5 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID : ::. :: :.::.:: . :: ::: .:.:::.. : : :: :.. :.::: ::::: CCDS78 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 540 550 560 570 580 590 460 470 480 490 500 510 pF1KE5 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCHICSS- :: . ::: :.:::.:.::.::. :.:: ::... .. :.:.. :: :.:.:: :.. CCDS78 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGA 600 610 620 630 640 650 520 530 540 550 560 pF1KE5 ----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS . .:::: . .:..:.:. :: :: : . :.::... .: CCDS78 RCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN 660 670 680 690 700 710 >>CCDS4390.1 CPEB4 gene_id:80315|Hs108|chr5 (729 aa) initn: 773 init1: 238 opt: 742 Z-score: 699.0 bits: 139.6 E(32554): 1.3e-32 Smith-Waterman score: 742; 44.7% identity (70.8% similar) in 257 aa overlap (309-558:470-720) 280 290 300 310 320 330 pF1KE5 ARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLS :: :::.::.: :: : .. .:: :: : CCDS43 LDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLI 440 450 460 470 480 490 340 350 360 370 380 390 pF1KE5 VEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRC :.:: : .. :::::..:.:. :.::..:..:: . :: . :. .:: .. CCDS43 VDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDAC----IEEDG--KLYLCVSSPTIKD 500 510 520 530 540 550 400 410 420 430 440 450 pF1KE5 KEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGID : ::. :: :.::.:: . :: ::: .:.:::.. : : :: :.. :.::: ::::: CCDS43 KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID 560 570 580 590 600 610 460 470 480 490 500 510 pF1KE5 TDKH-KYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPY-LEDSLCHICSS- :: . ::: :.:::.:.::.::. :.:: ::... .. :.:.. :: :.:.:: :.. CCDS43 TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGA 620 630 640 650 660 670 520 530 540 550 560 pF1KE5 ----QPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS . .:::: . .:..:.:. :: :: : . :.::... .: CCDS43 RCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN 680 690 700 710 720 561 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:50:42 2016 done: Tue Nov 8 05:50:43 2016 Total Scan time: 2.300 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]