FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9694, 316 aa 1>>>pF1KE9694 316 - 316 aa - 316 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.6321+/-0.000884; mu= 5.9169+/- 0.053 mean_var=165.4809+/-32.198, 0's: 0 Z-trim(111.3): 24 B-trim: 2 in 1/52 Lambda= 0.099701 statistics sampled from 12254 (12270) to 12254 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.377), width: 16 Scan time: 2.410 The best scores are: opt bits E(32554) CCDS42021.1 KNSTRN gene_id:90417|Hs108|chr15 ( 316) 1990 297.9 6.8e-81 CCDS45226.1 KNSTRN gene_id:90417|Hs108|chr15 ( 286) 1731 260.6 1e-69 CCDS45227.1 KNSTRN gene_id:90417|Hs108|chr15 ( 241) 1460 221.6 4.9e-58 >>CCDS42021.1 KNSTRN gene_id:90417|Hs108|chr15 (316 aa) initn: 1990 init1: 1990 opt: 1990 Z-score: 1565.8 bits: 297.9 E(32554): 6.8e-81 Smith-Waterman score: 1990; 98.7% identity (99.1% similar) in 316 aa overlap (1-316:1-316) 10 20 30 40 50 60 pF1KE9 MAAPEAPPLDRVFRTTWLSTECDSHPLPPSYRKFLFETQEADLAGGTTVAAGNLLNESEK ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS42 MAAPEAPPLDRVFRTTWLSTECDSHPLPPSYRKFLFETQAADLAGGTTVAAGNLLNESEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DCGQDRRAPGVQPCLLVTMTSVVKTVYSLQPSSALSGGQPADTQTRATSKSLLPVRSKEV :::::::::::::: :::::::::::::::: :::::::::::::::::::::::::::: CCDS42 DCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 DVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELKDKNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 DVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELKDKNQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 LLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDPALGGETLASRQE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: CCDS42 LLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDPALGSETLASRQE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 STTDHMDSMLLLETLQEELKLFNETAKKQMEELQALKVKLEMKEERVRFLEQQTLCNNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 STTDHMDSMLLLETLQEELKLFNETAKKQMEELQALKVKLEMKEERVRFLEQQTLCNNQV 250 260 270 280 290 300 310 pF1KE9 NDLTTALKEMEQLLEM :::::::::::::::: CCDS42 NDLTTALKEMEQLLEM 310 >>CCDS45226.1 KNSTRN gene_id:90417|Hs108|chr15 (286 aa) initn: 1731 init1: 1731 opt: 1731 Z-score: 1365.1 bits: 260.6 E(32554): 1e-69 Smith-Waterman score: 1731; 98.5% identity (98.9% similar) in 274 aa overlap (1-274:1-274) 10 20 30 40 50 60 pF1KE9 MAAPEAPPLDRVFRTTWLSTECDSHPLPPSYRKFLFETQEADLAGGTTVAAGNLLNESEK ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS45 MAAPEAPPLDRVFRTTWLSTECDSHPLPPSYRKFLFETQAADLAGGTTVAAGNLLNESEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DCGQDRRAPGVQPCLLVTMTSVVKTVYSLQPSSALSGGQPADTQTRATSKSLLPVRSKEV :::::::::::::: :::::::::::::::: :::::::::::::::::::::::::::: CCDS45 DCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 DVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELKDKNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELKDKNQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 LLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDPALGGETLASRQE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: CCDS45 LLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDPALGSETLASRQE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 STTDHMDSMLLLETLQEELKLFNETAKKQMEELQALKVKLEMKEERVRFLEQQTLCNNQV :::::::::::::::::::::::::::::::::: CCDS45 STTDHMDSMLLLETLQEELKLFNETAKKQMEELQIAWMNHGILHQM 250 260 270 280 310 pF1KE9 NDLTTALKEMEQLLEM >>CCDS45227.1 KNSTRN gene_id:90417|Hs108|chr15 (241 aa) initn: 1460 init1: 1460 opt: 1460 Z-score: 1155.4 bits: 221.6 E(32554): 4.9e-58 Smith-Waterman score: 1460; 98.7% identity (98.7% similar) in 228 aa overlap (1-228:1-228) 10 20 30 40 50 60 pF1KE9 MAAPEAPPLDRVFRTTWLSTECDSHPLPPSYRKFLFETQEADLAGGTTVAAGNLLNESEK ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS45 MAAPEAPPLDRVFRTTWLSTECDSHPLPPSYRKFLFETQAADLAGGTTVAAGNLLNESEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DCGQDRRAPGVQPCLLVTMTSVVKTVYSLQPSSALSGGQPADTQTRATSKSLLPVRSKEV :::::::::::::: :::::::::::::::: :::::::::::::::::::::::::::: CCDS45 DCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 DVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELKDKNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELKDKNQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 LLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDPALGGETLASRQE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDPVAVRNFARGAEA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 STTDHMDSMLLLETLQEELKLFNETAKKQMEELQALKVKLEMKEERVRFLEQQTLCNNQV CCDS45 F 316 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:36:44 2016 done: Tue Nov 8 10:36:44 2016 Total Scan time: 2.410 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]