FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1783, 289 aa 1>>>pF1KE1783 289 - 289 aa - 289 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4298+/-0.000729; mu= 14.9800+/- 0.044 mean_var=67.4911+/-13.233, 0's: 0 Z-trim(109.7): 8 B-trim: 0 in 0/50 Lambda= 0.156117 statistics sampled from 11078 (11081) to 11078 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.34), width: 16 Scan time: 2.570 The best scores are: opt bits E(32554) CCDS41994.1 TRMT61A gene_id:115708|Hs108|chr14 ( 289) 1962 450.3 7.4e-127 >>CCDS41994.1 TRMT61A gene_id:115708|Hs108|chr14 (289 aa) initn: 1962 init1: 1962 opt: 1962 Z-score: 2390.9 bits: 450.3 E(32554): 7.4e-127 Smith-Waterman score: 1962; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289) 10 20 30 40 50 60 pF1KE1 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 IIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNV 190 200 210 220 230 240 250 260 270 280 pF1KE1 RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 RTVSLPPPDLGTGTDGPAGSDTSPFRSGTPMKEAVGHTGYLTFATKTPG 250 260 270 280 289 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:06:04 2016 done: Sun Nov 6 11:06:05 2016 Total Scan time: 2.570 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]