FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1226, 300 aa 1>>>pF1KE1226 300 - 300 aa - 300 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4906+/-0.000648; mu= 15.4402+/- 0.039 mean_var=71.5017+/-14.207, 0's: 0 Z-trim(111.4): 22 B-trim: 0 in 0/55 Lambda= 0.151676 statistics sampled from 12363 (12385) to 12363 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.38), width: 16 Scan time: 2.700 The best scores are: opt bits E(32554) CCDS41923.1 PSMB11 gene_id:122706|Hs108|chr14 ( 300) 2077 462.9 1.3e-130 CCDS4757.1 PSMB8 gene_id:5696|Hs108|chr6 ( 276) 797 182.8 2.5e-46 CCDS4756.1 PSMB8 gene_id:5696|Hs108|chr6 ( 272) 778 178.7 4.3e-45 CCDS9584.1 PSMB5 gene_id:5693|Hs108|chr14 ( 263) 771 177.1 1.2e-44 CCDS45083.1 PSMB5 gene_id:5693|Hs108|chr14 ( 160) 577 134.6 4.9e-32 CCDS45084.1 PSMB5 gene_id:5693|Hs108|chr14 ( 203) 426 101.6 5.2e-22 CCDS11056.1 PSMB6 gene_id:5694|Hs108|chr17 ( 239) 354 85.9 3.3e-17 CCDS6855.1 PSMB7 gene_id:5695|Hs108|chr9 ( 277) 314 77.1 1.6e-14 CCDS4759.1 PSMB9 gene_id:5698|Hs108|chr6 ( 219) 295 72.9 2.4e-13 CCDS73944.1 PSMB6 gene_id:5694|Hs108|chr17 ( 213) 290 71.8 5e-13 CCDS10853.1 PSMB10 gene_id:5699|Hs108|chr16 ( 273) 277 69.0 4.4e-12 >>CCDS41923.1 PSMB11 gene_id:122706|Hs108|chr14 (300 aa) initn: 2077 init1: 2077 opt: 2077 Z-score: 2458.5 bits: 462.9 E(32554): 1.3e-130 Smith-Waterman score: 2077; 100.0% identity (100.0% similar) in 300 aa overlap (1-300:1-300) 10 20 30 40 50 60 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPRLAHGTTTLAFRFRHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPRLAHGTTTLAFRFRHG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 VIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 QLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 QLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 SPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 ACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRMPAGTETV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 ACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRMPAGTETV 250 260 270 280 290 300 >>CCDS4757.1 PSMB8 gene_id:5696|Hs108|chr6 (276 aa) initn: 857 init1: 769 opt: 797 Z-score: 945.3 bits: 182.8 E(32554): 2.5e-46 Smith-Waterman score: 817; 49.4% identity (69.4% similar) in 265 aa overlap (1-240:1-263) 10 20 30 40 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGG-----------------WAVPRGCDPQTFLQI-- ::: ::: .: : : :: ::. :.::: .: :.: CCDS47 MALLDVC--GAPRGQRPESALPVAGSGRRSDPGHYSFSMRSPELALPRGMQPTEFFQSLG 10 20 30 40 50 50 60 70 80 90 pF1KE1 -HGPR-----LAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTS : : .:::::::::.:.::::::.:.:.: :::.. ::: .. .:::: : CCDS47 GDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMS 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 GTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDR : .::: : :.: .: :: ::.:. ::..:.:::: :: ::::. : ... .::::. CCDS47 GCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 SGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHR .:: :.:: ::::.:..::.:::. :::::.: ::: ..: .::: :.: :.:.:::: CCDS47 KGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHR 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 DAYSGGSVDLFHVRESGWEHVSRSDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAE :.:::: :...:..:.:: .: .: CCDS47 DSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ 240 250 260 270 >>CCDS4756.1 PSMB8 gene_id:5696|Hs108|chr6 (272 aa) initn: 766 init1: 766 opt: 778 Z-score: 922.9 bits: 178.7 E(32554): 4.3e-45 Smith-Waterman score: 779; 50.2% identity (72.0% similar) in 239 aa overlap (13-240:30-259) 10 20 30 40 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGC---DPQTFLQ :: :.: : :: .: :.: CCDS47 MLIGTPTPRDTTPSSWLTSSLLVEAAPLDDTTLPTP---------VSSGCPGLEPTEFFQ 10 20 30 40 50 50 60 70 80 90 pF1KE1 IHGP--------RLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLG : ..:::::::::.:.::::::.:.:.: :::.. ::: .. .::: CCDS47 SLGGDGERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLG 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 TTSGTSADCATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCG : :: .::: : :.: .: :: ::.:. ::..:.:::: :: ::::. : ... .:: CCDS47 TMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICG 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 WDRSGPELFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHA ::..:: :.:: ::::.:..::.:::. :::::.: ::: ..: .::: :.: :.:.: CCDS47 WDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYA 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 THRDAYSGGSVDLFHVRESGWEHVSRSDACVLYVELQKLLEPEPEEDASHAHPEPATAHR ::::.:::: :...:..:.:: .: .: CCDS47 THRDSYSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ 240 250 260 270 >>CCDS9584.1 PSMB5 gene_id:5693|Hs108|chr14 (263 aa) initn: 790 init1: 763 opt: 771 Z-score: 914.9 bits: 177.1 E(32554): 1.2e-44 Smith-Waterman score: 786; 52.7% identity (77.9% similar) in 222 aa overlap (24-245:43-255) 10 20 30 40 50 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPRLAHGTTTL : ::.::. .: : .. :::::: CCDS95 VNQRGFFGLGGRADLLDLGPGSLSDGLSLAAPGWGVPE--EP-------GIEMLHGTTTL 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 AFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELR ::.::::::.:::.:.. :.:.: . ::: .. .:::: .: .:::. : :.: :. : CCDS95 AFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 LRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGD . :::. . :::.:.:::. :. ::.:. : ..: .::::. :: :.:: :.:.:..: CCDS95 IYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGA 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 IFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGW ::::::: :::::.:::: ::. ...:: ::: :. .::.:::::::.:.:.::::.:: CCDS95 TFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGW 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 EHVSRSDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRM .:: ... :. CCDS95 IRVSSDNVADLHEKYSGSTP 250 260 >>CCDS45083.1 PSMB5 gene_id:5693|Hs108|chr14 (160 aa) initn: 567 init1: 567 opt: 577 Z-score: 688.7 bits: 134.6 E(32554): 4.9e-32 Smith-Waterman score: 577; 54.3% identity (80.8% similar) in 151 aa overlap (95-245:2-152) 70 80 90 100 110 120 pF1KE1 ADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREGQLPS .: .:::. : :.: :. :. :::. . : CCDS45 MAGGAADCSFWERLLARQCRIYELRNKERIS 10 20 30 130 140 150 160 170 180 pF1KE1 VASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGDIFSVGSGSPYA ::.:.:::. :. ::.:. : ..: .::::. :: :.:: :.:.:..: ::::::: :: CCDS45 VAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYA 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE1 YGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSRSDACVL :::.:::: ::. ...:: ::: :. .::.:::::::.:.:.::::.:: .:: ... : CCDS45 YGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADL 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE1 YVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRMPAGTETV . CCDS45 HEKYSGSTP 160 >>CCDS45084.1 PSMB5 gene_id:5693|Hs108|chr14 (203 aa) initn: 453 init1: 426 opt: 426 Z-score: 508.6 bits: 101.6 E(32554): 5.2e-22 Smith-Waterman score: 441; 48.9% identity (74.1% similar) in 135 aa overlap (24-158:43-168) 10 20 30 40 50 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPRLAHGTTTL : ::.::. .: : .. :::::: CCDS45 VNQRGFFGLGGRADLLDLGPGSLSDGLSLAAPGWGVPE--EP-------GIEMLHGTTTL 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 AFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELR ::.::::::.:::.:.. :.:.: . ::: .. .:::: .: .:::. : :.: :. : CCDS45 AFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 LRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGD . :::. . :::.:.:::. :. ::.:. : ..: .::::. :: CCDS45 IYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPVSEVLCLKPKSFGMY 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 IFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGW CCDS45 LFCGCAERIGNMARPLLRGQ 190 200 >>CCDS11056.1 PSMB6 gene_id:5694|Hs108|chr17 (239 aa) initn: 332 init1: 305 opt: 354 Z-score: 422.4 bits: 85.9 E(32554): 3.3e-17 Smith-Waterman score: 354; 32.7% identity (60.7% similar) in 214 aa overlap (23-234:9-219) 10 20 30 40 50 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPR-LAHGTTTLAFRFRH :..: : : :..: : .. ::: .: .: CCDS11 MAATLLAARGAGPAPAWG--PEAFTPDWESREVSTGTTIMAVQFDG 10 20 30 40 60 70 80 90 100 110 pF1KE1 GVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELRE ::. .::.:.. :::.: .. :. :.:.... ::..:: . .. .: .. .. CCDS11 GVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIEL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 GQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWD-RSGPELFYVYSDGTRLQGDIFSVG .. : : .::.:.. : .:: :: .. . ::: . : ... : : .. .. : CCDS11 NEPPLVHTAASLFKEMCYRYRE-DLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 SGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSR ::: : :: .: :: :. .: .. :.: : .::. ::: . : . ::: : CCDS11 SGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 SDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRMPAGTE CCDS11 LGDQIPKFAVATLPPA 230 >>CCDS6855.1 PSMB7 gene_id:5695|Hs108|chr9 (277 aa) initn: 312 init1: 166 opt: 314 Z-score: 374.1 bits: 77.1 E(32554): 1.6e-14 Smith-Waterman score: 314; 29.6% identity (59.3% similar) in 216 aa overlap (18-225:5-218) 10 20 30 40 50 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQI----HGPRLAH----GTTT : . : .::.. .: .. :. .: .: . ::: CCDS68 MAAVSVYAPPVGGFSFD-NCRRNAVLEADFAKRGYKLPKVRKTGTTI 10 20 30 40 60 70 80 90 100 110 pF1KE1 LAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQREL . .. :.. .::::.. : :: :. . .. .::.:: .... .: CCDS68 AGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 RLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQG .:. : :.:: :..: ..:. :. .:.: . .: .: : : .::.:. .: :. . CCDS68 ELHSLSTGRLPRVVTANRMLKQMLFRYQGY-IGAALVLGGVDVTGPHLYSIYPHGSTDKL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 DIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESG ..:::: :..:.. .: :: .:: :. :.: . : ::...:: CCDS68 PYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNK 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 WEHVSRSDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSR CCDS68 LDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS 230 240 250 260 270 >>CCDS4759.1 PSMB9 gene_id:5698|Hs108|chr6 (219 aa) initn: 312 init1: 154 opt: 295 Z-score: 353.2 bits: 72.9 E(32554): 2.4e-13 Smith-Waterman score: 297; 30.7% identity (57.2% similar) in 215 aa overlap (23-235:3-205) 10 20 30 40 50 60 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPRLAHGTTTLAFRFRHG ::: .: : :.. ..: ::: .: .: : CCDS47 MLRAG---APTGDLPRAG-EVHT-----GTTIMAVEFDGG 10 20 30 70 80 90 100 110 120 pF1KE1 VIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELREG :. ..:.: : : :. . :. :.:... . ::..:: . . .:.:. .. CCDS47 VVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELE 40 50 60 70 80 90 130 140 150 160 170 pF1KE1 QLPSVASAAKLLSAMMSQYRGLDLCVATALCGWD-RSGPELFYVYSDGTRLQGDIFSVG- . : : .::... . .:: :: . . ::: : : ... . : : . :..: CCDS47 EPPLVLAAANVVRNISYKYRE-DLSAHLMVAGWDQREGGQVYGTL--GGMLTRQPFAIGG 100 110 120 130 140 180 190 200 210 220 230 pF1KE1 SGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSR ::: . :: .: .:. :: .: .. :.: : ::. ::: . : . .: .: CCDS47 SGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAGVDHRVI 150 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 SDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRMPAGTE CCDS47 LGNELPKFYDE 210 >>CCDS73944.1 PSMB6 gene_id:5694|Hs108|chr17 (213 aa) initn: 268 init1: 241 opt: 290 Z-score: 347.4 bits: 71.8 E(32554): 5e-13 Smith-Waterman score: 290; 31.7% identity (61.1% similar) in 180 aa overlap (23-200:9-185) 10 20 30 40 50 pF1KE1 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQIHGPR-LAHGTTTLAFRFRH :..: : : :..: : .. ::: .: .: CCDS73 MAATLLAARGAGPAPAWG--PEAFTPDWESREVSTGTTIMAVQFDG 10 20 30 40 60 70 80 90 100 110 pF1KE1 GVIAAADTRSSCGSYVACPASCKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRELRE ::. .::.:.. :::.: .. :. :.:.... ::..:: . .. .: .. .. CCDS73 GVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIEL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 GQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWD-RSGPELFYVYSDGTRLQGDIFSVG .. : : .::.:.. : .:: :: .. . ::: . : ... : : .. .. : CCDS73 NEPPLVHTAASLFKEMCYRYRE-DLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 SGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGWEHVSR ::: : :: .: :: :. .: CCDS73 SGSSYIYGYVDATYREGMTKEECLQFTANAFFFYPQLSLWPWSGMAPVEE 170 180 190 200 210 300 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:06:39 2016 done: Sun Nov 6 11:06:40 2016 Total Scan time: 2.700 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]