FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5195, 156 aa 1>>>pF1KE5195 156 - 156 aa - 156 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8926+/-0.000646; mu= 15.1620+/- 0.039 mean_var=73.3534+/-14.394, 0's: 0 Z-trim(112.0): 24 B-trim: 6 in 1/50 Lambda= 0.149749 statistics sampled from 12852 (12875) to 12852 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.395), width: 16 Scan time: 1.700 The best scores are: opt bits E(32554) CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 ( 156) 1086 242.8 6.7e-65 CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 ( 154) 841 189.8 5.7e-49 CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 ( 150) 587 134.9 1.8e-32 CCDS9561.1 RNASE2 gene_id:6036|Hs108|chr14 ( 161) 415 97.8 3e-21 CCDS9560.1 RNASE3 gene_id:6037|Hs108|chr14 ( 160) 368 87.6 3.4e-18 CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 ( 156) 321 77.5 3.8e-15 CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 ( 147) 277 67.9 2.6e-12 >>CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 (156 aa) initn: 1086 init1: 1086 opt: 1086 Z-score: 1278.7 bits: 242.8 E(32554): 6.7e-65 Smith-Waterman score: 1086; 98.7% identity (99.4% similar) in 156 aa overlap (1-156:1-156) 10 20 30 40 50 60 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGPVSLTMCKLTSGKYPNCR :::::::::::::::::::::::::::::::::::::::::: ::::::::::::.:::: CCDS41 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGAVSLTMCKLTSGKHPNCR 70 80 90 100 110 120 130 140 150 pF1KE5 YKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL :::::::::::::::::::::::::::::::::::: CCDS41 YKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL 130 140 150 >>CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 (154 aa) initn: 898 init1: 741 opt: 841 Z-score: 992.7 bits: 189.8 E(32554): 5.7e-49 Smith-Waterman score: 841; 78.2% identity (87.8% similar) in 156 aa overlap (1-156:1-154) 10 20 30 40 50 60 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK ::::::: :::::::: ::::::. : :::: :::::::: ::.:::::::::::. ::: CCDS95 MAPARAGCCPLLLLLL-GLWVAEVLVRAKPKDMTSSQWFKTQHVQPSPQACNSAMSIINK 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGPVSLTMCKLTSGKYPNCR .:.::::::::::::::::: :::::.:::::. :::::::::.:::: .:::::::::: CCDS95 YTERCKDLNTFLHEPFSSVAITCQTPNIACKNSCKNCHQSHGPMSLTMGELTSGKYPNCR 60 70 80 90 100 110 130 140 150 pF1KE5 YKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL ::::. : :.::: :::. : . :::::::.:. CCDS95 YKEKHLNTPYIVACDPPQQGDPG-YPLVPVHLDKVV 120 130 140 150 >>CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 (150 aa) initn: 621 init1: 535 opt: 587 Z-score: 696.3 bits: 134.9 E(32554): 1.8e-32 Smith-Waterman score: 587; 55.7% identity (77.9% similar) in 149 aa overlap (8-156:3-150) 10 20 30 40 50 60 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK .: :::::: :: :. : :: .:...::.:::.:::: :: ::..::. CCDS95 MVLCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHIQPSPLQCNRAMSGINN 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGPVSLTMCKLTSGKYPNCR .:..:: :::::. :..:::.:. .:.::: .::::: ::..: :.:::::::.:: CCDS95 YTQHCKHQNTFLHDSFQNVAAVCDLLSIVCKNRRHNCHQSSKPVNMTDCRLTSGKYPQCR 60 70 80 90 100 110 130 140 150 pF1KE5 YKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL :. : : ..::: ::::.: ..::::::: .: CCDS95 YSAAAQYKFFIVACDPPQKSDPP-YKLVPVHLDSIL 120 130 140 150 >>CCDS9561.1 RNASE2 gene_id:6036|Hs108|chr14 (161 aa) initn: 363 init1: 197 opt: 415 Z-score: 495.1 bits: 97.8 E(32554): 3e-21 Smith-Waterman score: 415; 42.0% identity (68.7% similar) in 150 aa overlap (13-156:12-161) 10 20 30 40 50 60 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK ::::::: ..: . .:: .: .:::. ::.. . : :..::. ::. CCDS95 MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINN 10 20 30 40 50 70 80 90 100 110 pF1KE5 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGD--KNCHQSHGPVSLTMCKLTSGK--- . .:::. :::: :..:. .: .:...: .. ::::.: . : : :.::. . CCDS95 YQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQN 60 70 80 90 100 110 120 130 140 150 pF1KE5 YPNCRYKEKRQNKSYVVACKP-PQKKDSQQFHLVPVHLDRVL :::: . : :.::: :..: :. .:::::::.. CCDS95 ISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 120 130 140 150 160 >>CCDS9560.1 RNASE3 gene_id:6037|Hs108|chr14 (160 aa) initn: 359 init1: 234 opt: 368 Z-score: 440.2 bits: 87.6 E(32554): 3.4e-18 Smith-Waterman score: 368; 39.6% identity (64.4% similar) in 149 aa overlap (13-156:12-160) 10 20 30 40 50 60 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK ::::::: .: . :.: .: .::: :::.. .: :. ::. ::. CCDS95 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINN 10 20 30 40 50 70 80 90 100 110 pF1KE5 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGD--KNCHQSHGPVSLTMCKLTSG---K . :::. ::::. :..:. .: . .: : .. .:::.:. : : : : . . CCDS95 YRWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQN 60 70 80 90 100 110 120 130 140 150 pF1KE5 YPNCRYKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL :: : .. . ::::: . .:: .. .:::::: .. CCDS95 ISNCTYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI 120 130 140 150 160 >>CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 (156 aa) initn: 345 init1: 217 opt: 321 Z-score: 385.5 bits: 77.5 E(32554): 3.8e-15 Smith-Waterman score: 321; 37.3% identity (62.7% similar) in 150 aa overlap (11-153:14-149) 10 20 30 40 50 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQP--SPQA----C .:.::.:: :: : .: . .. :. :::. ::.. : CCDS95 MALEKSLVRLLLLVLILLVLG-WVQ--PSLGKE---SRAKKFQRQHMDSDSSPSSSSTYC 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 NSAMKNINKHTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGPVSLTMCKL :. :. : ::: .:::.:::. .: .: :..::::. ::..:.. . .: :.: CCDS95 NQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRL 60 70 80 90 100 110 120 130 140 150 pF1KE5 TSG-KYPNCRYKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL :.: .:::: :. . ... .:::. ::::.: CCDS95 TNGSRYPNCAYRTSPKERHIIVACEGSP--------YVPVHFDASVEDST 120 130 140 150 >>CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 (147 aa) initn: 276 init1: 154 opt: 277 Z-score: 334.4 bits: 67.9 E(32554): 2.6e-12 Smith-Waterman score: 288; 39.3% identity (59.3% similar) in 150 aa overlap (11-153:12-146) 10 20 30 40 50 pF1KE5 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQP-----SPQACNSA :::: :::: ... : : :: : : ::..: : . :: CCDS95 MALQRTHSLLLLLLLTLLGLGLVQ-P-SYGQDGMY--QRFLRQHVHPEETGGSDRYCNLM 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 MKNINKHTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGPVSLTMCKLT-S :. . .:: .:::.:: . .. . :.: .: :::: :::. : :..: :. : : CCDS95 MQRRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHE--GVVKVTDCRDTGS 60 70 80 90 100 110 120 130 140 150 pF1KE5 GKYPNCRYKEKRQNKSYVVACKP-PQKKDSQQFHLVPVHLDRVL .. :::::. ... :.::. :: ::::.: CCDS95 SRAPNCRYRAIASTRRVVIACEGNPQ---------VPVHFDG 120 130 140 156 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:26:46 2016 done: Mon Nov 7 22:26:46 2016 Total Scan time: 1.700 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]