FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6435, 473 aa 1>>>pF1KE6435 473 - 473 aa - 473 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2205+/-0.000504; mu= 17.9130+/- 0.031 mean_var=68.5478+/-14.863, 0's: 0 Z-trim(108.1): 40 B-trim: 0 in 0/50 Lambda= 0.154909 statistics sampled from 16120 (16138) to 16120 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.537), E-opt: 0.2 (0.189), width: 16 Scan time: 5.030 The best scores are: opt bits E(85289) NP_116223 (OMIM: 603313,613688) dol-P-Glc:Glc(2)Ma ( 473) 3234 732.6 5.7e-211 >>NP_116223 (OMIM: 603313,613688) dol-P-Glc:Glc(2)Man(9) (473 aa) initn: 3234 init1: 3234 opt: 3234 Z-score: 3908.6 bits: 732.6 E(85289): 5.7e-211 Smith-Waterman score: 3234; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473) 10 20 30 40 50 60 pF1KE6 MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MITTLPGLYLVSIGVIKPAIWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFCKVQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 MITTLPGLYLVSIGVIKPAIWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFCKVQP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 CGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKEDRLPPIKGPFAEFRKILQFLLAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 CGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKEDRLPPIKGPFAEFRKILQFLLAY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SMSFKNLSMLLLLTWPYILLGFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 SMSFKNLSMLLLLTWPYILLGFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 FSFPHLLSPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 FSFPHLLSPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 RVFQRYETVKYLLVPAYIFAGWSIADSLKSKSIFWNLMFFICLFTVIVPQKLLEFRYFIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 RVFQRYETVKYLLVPAYIFAGWSIADSLKSKSIFWNLMFFICLFTVIVPQKLLEFRYFIL 370 380 390 400 410 420 430 440 450 460 470 pF1KE6 PYVIYRLNIPLPPTSRLICELSCYAVVNFITFFIFLNKTFQWPNSQDIQRFMW ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 PYVIYRLNIPLPPTSRLICELSCYAVVNFITFFIFLNKTFQWPNSQDIQRFMW 430 440 450 460 470 473 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:16:37 2016 done: Tue Nov 8 13:16:38 2016 Total Scan time: 5.030 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]