FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6435, 473 aa 1>>>pF1KE6435 473 - 473 aa - 473 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3776+/-0.0011; mu= 16.8429+/- 0.065 mean_var=66.0114+/-14.112, 0's: 0 Z-trim(102.6): 45 B-trim: 475 in 1/48 Lambda= 0.157857 statistics sampled from 6987 (7009) to 6987 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.569), E-opt: 0.2 (0.215), width: 16 Scan time: 2.170 The best scores are: opt bits E(32554) CCDS41769.1 ALG10 gene_id:84920|Hs108|chr12 ( 473) 3234 746.0 2e-215 CCDS31772.1 ALG10B gene_id:144245|Hs108|chr12 ( 473) 3116 719.1 2.5e-207 CCDS76548.1 ALG10B gene_id:144245|Hs108|chr12 ( 126) 816 195.0 3.9e-50 >>CCDS41769.1 ALG10 gene_id:84920|Hs108|chr12 (473 aa) initn: 3234 init1: 3234 opt: 3234 Z-score: 3980.9 bits: 746.0 E(32554): 2e-215 Smith-Waterman score: 3234; 100.0% identity (100.0% similar) in 473 aa overlap (1-473:1-473) 10 20 30 40 50 60 pF1KE6 MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MITTLPGLYLVSIGVIKPAIWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFCKVQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MITTLPGLYLVSIGVIKPAIWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFCKVQP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 CGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKEDRLPPIKGPFAEFRKILQFLLAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 CGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKEDRLPPIKGPFAEFRKILQFLLAY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SMSFKNLSMLLLLTWPYILLGFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SMSFKNLSMLLLLTWPYILLGFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 FSFPHLLSPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 FSFPHLLSPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 RVFQRYETVKYLLVPAYIFAGWSIADSLKSKSIFWNLMFFICLFTVIVPQKLLEFRYFIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 RVFQRYETVKYLLVPAYIFAGWSIADSLKSKSIFWNLMFFICLFTVIVPQKLLEFRYFIL 370 380 390 400 410 420 430 440 450 460 470 pF1KE6 PYVIYRLNIPLPPTSRLICELSCYAVVNFITFFIFLNKTFQWPNSQDIQRFMW ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PYVIYRLNIPLPPTSRLICELSCYAVVNFITFFIFLNKTFQWPNSQDIQRFMW 430 440 450 460 470 >>CCDS31772.1 ALG10B gene_id:144245|Hs108|chr12 (473 aa) initn: 3116 init1: 3116 opt: 3116 Z-score: 3835.7 bits: 719.1 E(32554): 2.5e-207 Smith-Waterman score: 3116; 96.0% identity (98.1% similar) in 473 aa overlap (1-473:1-473) 10 20 30 40 50 60 pF1KE6 MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MAQLEGYCFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MITTLPGLYLVSIGVIKPAIWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFCKVQP ::::::::::::.::.:::::::.::::::::::::::::::::::::::::::: :::: CCDS31 MITTLPGLYLVSVGVVKPAIWIFAWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFHKVQP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 CGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKEDRLPPIKGPFAEFRKILQFLLAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 CGFMFRQTNIIWAVFCAGNVIAQKLTEAWKTELQKKEDRLPPIKGPFAEFRKILQFLLAY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SMSFKNLSMLLLLTWPYILLGFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLF ::::::::::. :::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SMSFKNLSMLFCLTWPYILLGFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 FSFPHLLSPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWK :::::::::::::::::::::. :::.::::::::::::::::::::::::::::::::: CCDS31 FSFPHLLSPSKIKTFLSLVWKHGILFLVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 RVFQRYETVKYLLVPAYIFAGWSIADSLKSKSIFWNLMFFICLFTVIVPQKLLEFRYFIL :::::: .:::::::::::::::::::::: :::::::::::: ::::::::::::::: CCDS31 RVFQRYAILKYLLVPAYIFAGWSIADSLKSKPIFWNLMFFICLFIVIVPQKLLEFRYFIL 370 380 390 400 410 420 430 440 450 460 470 pF1KE6 PYVIYRLNIPLPPTSRLICELSCYAVVNFITFFIFLNKTFQWPNSQDIQRFMW ::::::::: :::::::.:::::::.::::::.:::::::::::::::::::: CCDS31 PYVIYRLNITLPPTSRLVCELSCYAIVNFITFYIFLNKTFQWPNSQDIQRFMW 430 440 450 460 470 >>CCDS76548.1 ALG10B gene_id:144245|Hs108|chr12 (126 aa) initn: 816 init1: 816 opt: 816 Z-score: 1013.6 bits: 195.0 E(32554): 3.9e-50 Smith-Waterman score: 816; 95.9% identity (98.4% similar) in 123 aa overlap (1-123:1-123) 10 20 30 40 50 60 pF1KE6 MAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MAQLEGYCFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 MITTLPGLYLVSIGVIKPAIWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFCKVQP ::::::::::::.::.:::::::.::::::::::::::::::::::::::::::: :::: CCDS76 MITTLPGLYLVSVGVVKPAIWIFAWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLFHKVQP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RNKAASSIQRVLSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSAFLGF ::: CCDS76 RNKEYF 473 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:16:37 2016 done: Tue Nov 8 13:16:37 2016 Total Scan time: 2.170 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]