FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5242, 201 aa 1>>>pF1KE5242 201 - 201 aa - 201 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3276+/-0.000411; mu= 13.3663+/- 0.026 mean_var=76.7451+/-15.265, 0's: 0 Z-trim(112.2): 140 B-trim: 0 in 0/51 Lambda= 0.146403 statistics sampled from 20853 (21031) to 20853 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.247), width: 16 Scan time: 3.810 The best scores are: opt bits E(85289) NP_783859 (OMIM: 609538) phosphatidylglycerophosph ( 201) 1316 287.3 1.1e-77 NP_001137456 (OMIM: 609538) phosphatidylglyceropho ( 151) 384 90.4 1.6e-18 XP_016875477 (OMIM: 607175) PREDICTED: dual specif ( 517) 158 43.0 0.00098 XP_005253545 (OMIM: 607175) PREDICTED: dual specif ( 517) 158 43.0 0.00098 XP_006719218 (OMIM: 607175) PREDICTED: dual specif ( 665) 158 43.1 0.0012 XP_011519159 (OMIM: 607175) PREDICTED: dual specif ( 665) 158 43.1 0.0012 XP_011519158 (OMIM: 607175) PREDICTED: dual specif ( 665) 158 43.1 0.0012 NP_085143 (OMIM: 607175) dual specificity protein ( 665) 158 43.1 0.0012 NP_064570 (OMIM: 616778) dual specificity protein ( 184) 143 39.5 0.0039 NP_001273484 (OMIM: 616778) dual specificity prote ( 205) 143 39.6 0.0043 XP_016883145 (OMIM: 616776) PREDICTED: dual specif ( 311) 145 40.1 0.0044 XP_016883144 (OMIM: 616776) PREDICTED: dual specif ( 332) 145 40.1 0.0047 XP_016883143 (OMIM: 616776) PREDICTED: dual specif ( 335) 145 40.2 0.0047 NP_004410 (OMIM: 603069) dual specificity protein ( 384) 144 40.0 0.0061 NP_004408 (OMIM: 600714) dual specificity protein ( 367) 143 39.8 0.0068 XP_016880743 (OMIM: 606779) PREDICTED: protein pho ( 480) 144 40.1 0.0072 NP_001307407 (OMIM: 616776) dual specificity prote ( 232) 138 38.6 0.0098 NP_542178 (OMIM: 616776) dual specificity protein ( 235) 138 38.6 0.0099 >>NP_783859 (OMIM: 609538) phosphatidylglycerophosphatas (201 aa) initn: 1316 init1: 1316 opt: 1316 Z-score: 1515.6 bits: 287.3 E(85289): 1.1e-77 Smith-Waterman score: 1316; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201) 10 20 30 40 50 60 pF1KE5 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK 130 140 150 160 170 180 190 200 pF1KE5 EFHKQITARATKDGTFVISKT ::::::::::::::::::::: NP_783 EFHKQITARATKDGTFVISKT 190 200 >>NP_001137456 (OMIM: 609538) phosphatidylglycerophospha (151 aa) initn: 384 init1: 384 opt: 384 Z-score: 453.5 bits: 90.4 E(85289): 1.6e-18 Smith-Waterman score: 384; 98.3% identity (100.0% similar) in 59 aa overlap (1-59:1-59) 10 20 30 40 50 60 pF1KE5 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. NP_001 MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK NP_001 RAGEPGPLPRPRRSVPVGPLGSPPSLLSHLFASAAGTGRERARGDHHERGVRDEVPVQLF 70 80 90 100 110 120 >>XP_016875477 (OMIM: 607175) PREDICTED: dual specificit (517 aa) initn: 119 init1: 119 opt: 158 Z-score: 188.0 bits: 43.0 E(85289): 0.00098 Smith-Waterman score: 158; 34.0% identity (58.0% similar) in 100 aa overlap (95-194:59-158) 70 80 90 100 110 120 pF1KE5 VRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSL ::. . : : :.:.:.: : .. XP_016 QELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKAS 30 40 50 60 70 80 130 140 150 160 170 180 pF1KE5 GQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHK . :: ::: :: :::::.. ::... : .:: : . . : : . : : ...: XP_016 NGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEK 90 100 110 120 130 140 190 200 pF1KE5 QITARATKDGTFVISKT .: .. .: XP_016 KIKNQTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVH 150 160 170 180 190 200 >>XP_005253545 (OMIM: 607175) PREDICTED: dual specificit (517 aa) initn: 119 init1: 119 opt: 158 Z-score: 188.0 bits: 43.0 E(85289): 0.00098 Smith-Waterman score: 158; 34.0% identity (58.0% similar) in 100 aa overlap (95-194:59-158) 70 80 90 100 110 120 pF1KE5 VRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSL ::. . : : :.:.:.: : .. XP_005 QELMQQNGIGYVLNASNTCPKPDFIPESHFLRVPVNDSFCEKILPWLDKSVDFIEKAKAS 30 40 50 60 70 80 130 140 150 160 170 180 pF1KE5 GQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHK . :: ::: :: :::::.. ::... : .:: : . . : : . : : ...: XP_005 NGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEK 90 100 110 120 130 140 190 200 pF1KE5 QITARATKDGTFVISKT .: .. .: XP_005 KIKNQTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVH 150 160 170 180 190 200 >>XP_006719218 (OMIM: 607175) PREDICTED: dual specificit (665 aa) initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012 Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306) 10 20 30 40 50 60 pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI :: :.. :: :...:.:.... :. XP_006 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL 140 150 160 170 180 70 80 90 100 110 120 pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV . : . :. .: . ::. . : : :.:.:.: : .. . :: XP_006 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV 190 200 210 220 230 240 130 140 150 160 170 180 pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA ::: :: :::::.. ::... : .:: : . . : : . : : ...:.: XP_006 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN 250 260 270 280 290 300 190 200 pF1KE5 RATKDGTFVISKT .. .: XP_006 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV 310 320 330 340 350 360 >>XP_011519159 (OMIM: 607175) PREDICTED: dual specificit (665 aa) initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012 Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306) 10 20 30 40 50 60 pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI :: :.. :: :...:.:.... :. XP_011 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL 140 150 160 170 180 70 80 90 100 110 120 pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV . : . :. .: . ::. . : : :.:.:.: : .. . :: XP_011 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV 190 200 210 220 230 240 130 140 150 160 170 180 pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA ::: :: :::::.. ::... : .:: : . . : : . : : ...:.: XP_011 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN 250 260 270 280 290 300 190 200 pF1KE5 RATKDGTFVISKT .. .: XP_011 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV 310 320 330 340 350 360 >>XP_011519158 (OMIM: 607175) PREDICTED: dual specificit (665 aa) initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012 Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306) 10 20 30 40 50 60 pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI :: :.. :: :...:.:.... :. XP_011 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL 140 150 160 170 180 70 80 90 100 110 120 pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV . : . :. .: . ::. . : : :.:.:.: : .. . :: XP_011 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV 190 200 210 220 230 240 130 140 150 160 170 180 pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA ::: :: :::::.. ::... : .:: : . . : : . : : ...:.: XP_011 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN 250 260 270 280 290 300 190 200 pF1KE5 RATKDGTFVISKT .. .: XP_011 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV 310 320 330 340 350 360 >>NP_085143 (OMIM: 607175) dual specificity protein phos (665 aa) initn: 147 init1: 119 opt: 158 Z-score: 186.5 bits: 43.1 E(85289): 0.0012 Smith-Waterman score: 160; 29.5% identity (55.1% similar) in 156 aa overlap (40-194:161-306) 10 20 30 40 50 60 pF1KE5 GLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVI :: :.. :: :...:.:.... :. NP_085 CFPGLCEGKSTLVPTCISQPCLPVANIGPTRILPNLYLGC-QRDVLNKELMQQNGIGYVL 140 150 160 170 180 70 80 90 100 110 120 pF1KE5 TM-NEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCV . : . :. .: . ::. . : : :.:.:.: : .. . :: NP_085 NASNTCPKPDFIPES---------HFLRVPVNDSFCEKILPWLDKSVDFIEKAKASNGCV 190 200 210 220 230 240 130 140 150 160 170 180 pF1KE5 YVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQITA ::: :: :::::.. ::... : .:: : . . : : . : : ...:.: NP_085 LVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFVKEKRPTISPNFNFLGQLLDYEKKIKN 250 260 270 280 290 300 190 200 pF1KE5 RATKDGTFVISKT .. .: NP_085 QTGASGPKSKLKLLHLEKPNEPVPAVSEGGQKSETPLSPPCADSATSEAAGQRPVHPASV 310 320 330 340 350 360 >>NP_064570 (OMIM: 616778) dual specificity protein phos (184 aa) initn: 131 init1: 117 opt: 143 Z-score: 177.2 bits: 39.5 E(85289): 0.0039 Smith-Waterman score: 143; 29.5% identity (61.1% similar) in 95 aa overlap (91-185:47-141) 70 80 90 100 110 120 pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK ::. : . ..: . .......: . NP_064 FKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPSQNLTRHFKESIKFIHE 20 30 40 50 60 70 130 140 150 160 170 180 pF1KE5 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK . :. ::: :: :::.:.: ::.. : .. :.:.... :: . : :. NP_064 CRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQ 80 90 100 110 120 130 190 200 pF1KE5 EFHKQITARATKDGTFVISKT ::.:. NP_064 EFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILAAPGILKFWAFLRRL 140 150 160 170 180 >>NP_001273484 (OMIM: 616778) dual specificity protein p (205 aa) initn: 117 init1: 117 opt: 143 Z-score: 176.5 bits: 39.6 E(85289): 0.0043 Smith-Waterman score: 143; 29.5% identity (61.1% similar) in 95 aa overlap (91-185:47-141) 70 80 90 100 110 120 pF1KE5 QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK ::. : . ..: . .......: . NP_001 FKDARDAEQLSKNKVTHILSVHDSARPMLEGVKYLCIPAADSPSQNLTRHFKESIKFIHE 20 30 40 50 60 70 130 140 150 160 170 180 pF1KE5 YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK . :. ::: :: :::.:.: ::.. : .. :.:.... :: . : :. NP_001 CRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQ 80 90 100 110 120 130 190 200 pF1KE5 EFHKQITARATKDGTFVISKT ::.:. NP_001 EFEKHEVHQYRQWLKEEYGESPLQDAEEAKNILGKYKEQGRTEPQPGARRWSSFPALAPL 140 150 160 170 180 190 201 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:48:52 2016 done: Mon Nov 7 22:48:53 2016 Total Scan time: 3.810 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]