FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1856, 375 aa 1>>>pF1KE1856 375 - 375 aa - 375 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4748+/-0.00095; mu= 14.9029+/- 0.056 mean_var=60.9433+/-12.448, 0's: 0 Z-trim(104.3): 24 B-trim: 451 in 2/49 Lambda= 0.164290 statistics sampled from 7803 (7812) to 7803 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.24), width: 16 Scan time: 2.290 The best scores are: opt bits E(32554) CCDS41567.1 AS3MT gene_id:57412|Hs108|chr10 ( 375) 2522 606.5 1.2e-173 >>CCDS41567.1 AS3MT gene_id:57412|Hs108|chr10 (375 aa) initn: 2522 init1: 2522 opt: 2522 Z-score: 3231.1 bits: 606.5 E(32554): 1.2e-173 Smith-Waterman score: 2522; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375) 10 20 30 40 50 60 pF1KE1 MAALRDAEIQKDVQTYYGQVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MAALRDAEIQKDVQTYYGQVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 CGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 CGLVIPEHLENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHME 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KYGFQASNVTFIHGYIEKLGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KYGFQASNVTFIHGYIEKLGEAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LYFSDVYTSLELPEEIRTHKVLWGECLGGALYWKELAVLAQKIGFCPPRLVTANLITIQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LYFSDVYTSLELPEEIRTHKVLWGECLGGALYWKELAVLAQKIGFCPPRLVTANLITIQN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGITGHEKELMFDANFTFKEGEIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGITGHEKELMFDANFTFKEGEIV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EVDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLAEESDSMKSRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EVDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLAEESDSMKSRC 310 320 330 340 350 360 370 pF1KE1 VPDAAGGCCGTKKSC ::::::::::::::: CCDS41 VPDAAGGCCGTKKSC 370 375 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:07:43 2016 done: Sun Nov 6 11:07:43 2016 Total Scan time: 2.290 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]