Result of FASTA (omim) for
pFN21AE6157
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6157, 72 aa
1>>>pF1KE6157 72 - 72 aa - 72 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0637+/-0.00025; mu= 8.3202+/- 0.016
mean_var=54.4660+/-11.075, 0's: 0 Z-trim(120.3): 15 B-trim: 1273 in 1/55
Lambda= 0.173785
statistics sampled from 35288 (35303) to 35288 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.802), E-opt: 0.2 (0.414), width: 16
Scan time: 2.800
The best scores are: opt bits E(85289)
NP_001009616 (OMIM: 300668) sperm protein associat ( 72) 469 124.5 1.5e-29
NP_001009614 (OMIM: 300664) sperm protein associat ( 72) 416 111.2 1.5e-25
NP_001009615 (OMIM: 300665) sperm protein associat ( 180) 312 85.3 2.3e-17
NP_001009609 (OMIM: 300666) sperm protein associat ( 141) 309 84.5 3.1e-17
NP_001009613 (OMIM: 300667) sperm protein associat ( 99) 200 57.1 3.9e-09
NP_663695 (OMIM: 300493) sperm protein associated ( 97) 199 56.9 4.5e-09
NP_038481 (OMIM: 300305) sperm protein associated ( 97) 199 56.9 4.5e-09
XP_016885033 (OMIM: 300667) PREDICTED: sperm prote ( 156) 201 57.5 4.8e-09
XP_016885032 (OMIM: 300667) PREDICTED: sperm prote ( 157) 200 57.2 5.8e-09
XP_016855456 (OMIM: 300330) PREDICTED: sperm prote ( 97) 192 55.1 1.5e-08
XP_016855457 (OMIM: 300493) PREDICTED: sperm prote ( 97) 192 55.1 1.5e-08
XP_016884753 (OMIM: 300666) PREDICTED: sperm prote ( 140) 176 51.2 3.4e-07
NP_073152 (OMIM: 300330) sperm protein associated ( 97) 174 50.6 3.5e-07
NP_115793 (OMIM: 300670,300671) sperm protein asso ( 97) 174 50.6 3.5e-07
NP_115850 (OMIM: 300669) sperm protein associated ( 103) 158 46.6 5.9e-06
>>NP_001009616 (OMIM: 300668) sperm protein associated w (72 aa)
initn: 469 init1: 469 opt: 469 Z-score: 651.8 bits: 124.5 E(85289): 1.5e-29
Smith-Waterman score: 469; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72)
10 20 30 40 50 60
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK
10 20 30 40 50 60
70
pF1KE6 KIHSNQLENDQS
::::::::::::
NP_001 KIHSNQLENDQS
70
>>NP_001009614 (OMIM: 300664) sperm protein associated w (72 aa)
initn: 416 init1: 416 opt: 416 Z-score: 579.9 bits: 111.2 E(85289): 1.5e-25
Smith-Waterman score: 416; 86.1% identity (97.2% similar) in 72 aa overlap (1-72:1-72)
10 20 30 40 50 60
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK
::.:::: :::::::::.::..::::::::::::. ::::::::::::::::..::::.:
NP_001 MEQPTSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAK
10 20 30 40 50 60
70
pF1KE6 KIHSNQLENDQS
::::::::::::
NP_001 KIHSNQLENDQS
70
>>NP_001009615 (OMIM: 300665) sperm protein associated w (180 aa)
initn: 204 init1: 204 opt: 312 Z-score: 432.7 bits: 85.3 E(85289): 2.3e-17
Smith-Waterman score: 312; 69.9% identity (84.9% similar) in 73 aa overlap (1-72:1-73)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT
::.::::::::::::::.::.: ::::::.::: :. . ::.: :: :: :..: :::
NP_001 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH
10 20 30 40 50 60
60 70
pF1KE6 KKIHSNQLENDQS
::.:::::.:::
NP_001 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG
70 80 90 100 110 120
>>NP_001009609 (OMIM: 300666) sperm protein associated w (141 aa)
initn: 209 init1: 209 opt: 309 Z-score: 430.3 bits: 84.5 E(85289): 3.1e-17
Smith-Waterman score: 309; 69.9% identity (83.6% similar) in 73 aa overlap (1-72:1-73)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT
::.::::::::: ::::.::.: ::::::.::: :. : :::. ::::: ..: ::
NP_001 MEQPTSSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKNTKTSEYPIIFVYYLRKG
10 20 30 40 50 60
60 70
pF1KE6 KKIHSNQLENDQS
:::.::::::.::
NP_001 KKINSNQLENEQSQENSINPIQKEEDEGVDLSEGSSNEDEDLGPCEGPSKEDKDLDSSEG
70 80 90 100 110 120
>>NP_001009613 (OMIM: 300667) sperm protein associated w (99 aa)
initn: 197 init1: 148 opt: 200 Z-score: 285.1 bits: 57.1 E(85289): 3.9e-09
Smith-Waterman score: 200; 48.6% identity (77.8% similar) in 72 aa overlap (1-71:1-71)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKN-DEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT
::.:::::: .: ::::.::... :. ... .: . : :::. . ..: :.. : ::.
NP_001 MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYC-RKN
10 20 30 40 50
60 70
pF1KE6 KKIHSNQLENDQS
:: .::::::.:
NP_001 KKRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGGQN
60 70 80 90
>>NP_663695 (OMIM: 300493) sperm protein associated with (97 aa)
initn: 190 init1: 184 opt: 199 Z-score: 283.9 bits: 56.9 E(85289): 4.5e-09
Smith-Waterman score: 199; 49.3% identity (72.6% similar) in 73 aa overlap (1-72:1-72)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-
:.: ::..: ::. ::::: :. : :::. : .:. ::::::: ::.::. ::..
NP_663 MDKQ-SSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNF
10 20 30 40 50
60 70
pF1KE6 KKIHSNQLENDQS
:. ..: ::..
NP_663 KRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>NP_038481 (OMIM: 300305) sperm protein associated with (97 aa)
initn: 190 init1: 184 opt: 199 Z-score: 283.9 bits: 56.9 E(85289): 4.5e-09
Smith-Waterman score: 199; 49.3% identity (72.6% similar) in 73 aa overlap (1-72:1-72)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-
:.: ::..: ::. ::::: :. : :::. : .:. ::::::: ::.::. ::..
NP_038 MDKQ-SSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNF
10 20 30 40 50
60 70
pF1KE6 KKIHSNQLENDQS
:. ..: ::..
NP_038 KRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
>>XP_016885033 (OMIM: 300667) PREDICTED: sperm protein a (156 aa)
initn: 224 init1: 155 opt: 201 Z-score: 283.3 bits: 57.5 E(85289): 4.8e-09
Smith-Waterman score: 201; 47.9% identity (77.5% similar) in 71 aa overlap (1-71:1-70)
10 20 30 40 50 60
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK
::.:::::: .: ::::.::... . ... .: . : :::. . ..: :.. : ::.:
XP_016 MEEPTSSTNENKMKSPCESNKRKVDKKKNLHRASAPEQSLKETEKAKYPTLVFYC-RKNK
10 20 30 40 50
70
pF1KE6 KIHSNQLENDQS
: .::::::.:
XP_016 KRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGEEEKDLVFLGARACLEEHIRRSVL
60 70 80 90 100 110
>>XP_016885032 (OMIM: 300667) PREDICTED: sperm protein a (157 aa)
initn: 197 init1: 148 opt: 200 Z-score: 281.9 bits: 57.2 E(85289): 5.8e-09
Smith-Waterman score: 200; 48.6% identity (77.8% similar) in 72 aa overlap (1-71:1-71)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKN-DEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT
::.:::::: .: ::::.::... :. ... .: . : :::. . ..: :.. : ::.
XP_016 MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYC-RKN
10 20 30 40 50
60 70
pF1KE6 KKIHSNQLENDQS
:: .::::::.:
XP_016 KKRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGEEEKDLVFLGARACLEEHIRRSV
60 70 80 90 100 110
>>XP_016855456 (OMIM: 300330) PREDICTED: sperm protein a (97 aa)
initn: 184 init1: 178 opt: 192 Z-score: 274.4 bits: 55.1 E(85289): 1.5e-08
Smith-Waterman score: 192; 47.9% identity (72.6% similar) in 73 aa overlap (1-72:1-72)
10 20 30 40 50
pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-
:.: ::..: ::. ::.:: :. : :::. : .:. ::::::: ::.::. ::..
XP_016 MDKQ-SSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNV
10 20 30 40 50
60 70
pF1KE6 KKIHSNQLENDQS
:. ..: ::..
XP_016 KRTSPEELLNDHARENRINPLQMEEEEFMEIMVEIPAK
60 70 80 90
72 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 09:56:49 2016 done: Tue Nov 8 09:56:50 2016
Total Scan time: 2.800 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]