FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6157, 72 aa 1>>>pF1KE6157 72 - 72 aa - 72 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3164+/-0.000512; mu= 6.7616+/- 0.031 mean_var=53.8148+/-10.584, 0's: 0 Z-trim(112.9): 10 B-trim: 0 in 0/52 Lambda= 0.174833 statistics sampled from 13577 (13587) to 13577 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.417), width: 16 Scan time: 1.040 The best scores are: opt bits E(32554) CCDS35295.1 SPANXN5 gene_id:494197|Hs108|chrX ( 72) 469 125.3 3.2e-30 CCDS35421.1 SPANXN1 gene_id:494118|Hs108|chrX ( 72) 416 111.9 3.4e-26 CCDS35419.1 SPANXN2 gene_id:494119|Hs108|chrX ( 180) 312 85.8 6.3e-18 CCDS35418.1 SPANXN3 gene_id:139067|Hs108|chrX ( 141) 309 85.0 8.5e-18 >>CCDS35295.1 SPANXN5 gene_id:494197|Hs108|chrX (72 aa) initn: 469 init1: 469 opt: 469 Z-score: 655.9 bits: 125.3 E(32554): 3.2e-30 Smith-Waterman score: 469; 100.0% identity (100.0% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK 10 20 30 40 50 60 70 pF1KE6 KIHSNQLENDQS :::::::::::: CCDS35 KIHSNQLENDQS 70 >>CCDS35421.1 SPANXN1 gene_id:494118|Hs108|chrX (72 aa) initn: 416 init1: 416 opt: 416 Z-score: 583.7 bits: 111.9 E(32554): 3.4e-26 Smith-Waterman score: 416; 86.1% identity (97.2% similar) in 72 aa overlap (1-72:1-72) 10 20 30 40 50 60 pF1KE6 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK ::.:::: :::::::::.::..::::::::::::. ::::::::::::::::..::::.: CCDS35 MEQPTSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAK 10 20 30 40 50 60 70 pF1KE6 KIHSNQLENDQS :::::::::::: CCDS35 KIHSNQLENDQS 70 >>CCDS35419.1 SPANXN2 gene_id:494119|Hs108|chrX (180 aa) initn: 204 init1: 204 opt: 312 Z-score: 435.3 bits: 85.8 E(32554): 6.3e-18 Smith-Waterman score: 312; 69.9% identity (84.9% similar) in 73 aa overlap (1-72:1-73) 10 20 30 40 50 pF1KE6 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT ::.::::::::::::::.::.: ::::::.::: :. . ::.: :: :: :..: ::: CCDS35 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH 10 20 30 40 50 60 60 70 pF1KE6 KKIHSNQLENDQS ::.:::::.::: CCDS35 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSSEG 70 80 90 100 110 120 >>CCDS35418.1 SPANXN3 gene_id:139067|Hs108|chrX (141 aa) initn: 209 init1: 209 opt: 309 Z-score: 433.0 bits: 85.0 E(32554): 8.5e-18 Smith-Waterman score: 309; 69.9% identity (83.6% similar) in 73 aa overlap (1-72:1-73) 10 20 30 40 50 pF1KE6 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT ::.::::::::: ::::.::.: ::::::.::: :. : :::. ::::: ..: :: CCDS35 MEQPTSSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKNTKTSEYPIIFVYYLRKG 10 20 30 40 50 60 60 70 pF1KE6 KKIHSNQLENDQS :::.::::::.:: CCDS35 KKINSNQLENEQSQENSINPIQKEEDEGVDLSEGSSNEDEDLGPCEGPSKEDKDLDSSEG 70 80 90 100 110 120 72 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:56:49 2016 done: Tue Nov 8 09:56:49 2016 Total Scan time: 1.040 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]