FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5016, 334 aa 1>>>pF1KE5016 334 - 334 aa - 334 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6241+/-0.00029; mu= 12.5883+/- 0.018 mean_var=160.2026+/-33.906, 0's: 0 Z-trim(123.4): 356 B-trim: 1765 in 1/55 Lambda= 0.101330 statistics sampled from 42713 (43153) to 42713 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.506), width: 16 Scan time: 7.710 The best scores are: opt bits E(85289) NP_001013675 (OMIM: 613505) leucine-rich repeat-co ( 334) 2286 345.3 1.1e-94 NP_001010847 (OMIM: 615212) leucine-rich repeat-co ( 294) 464 78.9 1.5e-14 NP_001005210 (OMIM: 615213) leucine-rich repeat-co ( 341) 453 77.3 5e-14 NP_003052 (OMIM: 603742) slit homolog 1 protein pr (1534) 419 73.1 4.3e-12 XP_016877935 (OMIM: 614179) PREDICTED: immunoglobu ( 468) 399 69.6 1.5e-11 NP_001123610 (OMIM: 614179) immunoglobulin superfa ( 745) 399 69.8 2e-11 XP_011520143 (OMIM: 614179) PREDICTED: immunoglobu ( 745) 399 69.8 2e-11 NP_065902 (OMIM: 614179) immunoglobulin superfamil ( 745) 399 69.8 2e-11 XP_011520142 (OMIM: 614179) PREDICTED: immunoglobu ( 745) 399 69.8 2e-11 NP_001123609 (OMIM: 614179) immunoglobulin superfa ( 745) 399 69.8 2e-11 NP_001123608 (OMIM: 614179) immunoglobulin superfa ( 745) 399 69.8 2e-11 NP_003053 (OMIM: 603745) slit homolog 3 protein is (1523) 370 65.9 6.2e-10 NP_001258875 (OMIM: 603745) slit homolog 3 protein (1530) 370 65.9 6.2e-10 XP_016865268 (OMIM: 603745) PREDICTED: slit homolo (1460) 365 65.2 1e-09 XP_016864334 (OMIM: 603746) PREDICTED: slit homolo (1495) 363 64.9 1.2e-09 XP_011512211 (OMIM: 603746) PREDICTED: slit homolo (1499) 363 64.9 1.2e-09 XP_006714049 (OMIM: 603746) PREDICTED: slit homolo (1509) 363 64.9 1.3e-09 NP_001276065 (OMIM: 603746) slit homolog 2 protein (1521) 363 64.9 1.3e-09 NP_001276064 (OMIM: 603746) slit homolog 2 protein (1525) 363 64.9 1.3e-09 NP_004778 (OMIM: 603746) slit homolog 2 protein is (1529) 363 64.9 1.3e-09 XP_005248268 (OMIM: 603746) PREDICTED: slit homolo (1533) 363 64.9 1.3e-09 NP_001005214 (OMIM: 615218) leucine-rich repeat-co ( 313) 351 62.4 1.5e-09 NP_005536 (OMIM: 602059) immunoglobulin superfamil ( 428) 353 62.8 1.5e-09 NP_958934 (OMIM: 602059) immunoglobulin superfamil ( 428) 353 62.8 1.5e-09 NP_055632 (OMIM: 613356) TLR4 interactor with leuc ( 811) 348 62.4 3.8e-09 NP_075380 (OMIM: 181500,605566) reticulon-4 recept ( 473) 336 60.4 8.9e-09 NP_612490 (OMIM: 616236) chondroadherin-like prote ( 762) 334 60.3 1.5e-08 XP_005261427 (OMIM: 616236) PREDICTED: chondroadhe ( 771) 334 60.3 1.5e-08 XP_011528236 (OMIM: 616236) PREDICTED: chondroadhe ( 825) 334 60.4 1.6e-08 XP_011528235 (OMIM: 616236) PREDICTED: chondroadhe ( 830) 334 60.4 1.6e-08 XP_011528234 (OMIM: 616236) PREDICTED: chondroadhe ( 839) 334 60.4 1.6e-08 NP_001004432 (OMIM: 609794) leucine-rich repeat an ( 593) 329 59.5 2.1e-08 NP_848665 (OMIM: 610462) reticulon-4 receptor-like ( 420) 324 58.6 2.8e-08 NP_004961 (OMIM: 601489,615961) insulin-like growt ( 605) 322 58.5 4.3e-08 NP_848663 (OMIM: 610461) reticulon-4 receptor-like ( 441) 319 57.9 4.7e-08 NP_004479 (OMIM: 173511) platelet glycoprotein V p ( 560) 319 58.0 5.6e-08 NP_001139478 (OMIM: 601489,615961) insulin-like gr ( 643) 317 57.8 7.5e-08 NP_001094861 (OMIM: 609792) leucine-rich repeat an ( 592) 306 56.1 2.2e-07 NP_612449 (OMIM: 608843) vasorin precursor [Homo s ( 673) 306 56.2 2.3e-07 XP_011512212 (OMIM: 603746) PREDICTED: slit homolo (1159) 306 56.4 3.4e-07 NP_001333361 (OMIM: 606666,615311) leucine-rich re ( 927) 304 56.0 3.6e-07 XP_016885198 (OMIM: 300278,310500) PREDICTED: nyct ( 481) 296 54.6 5.2e-07 NP_072089 (OMIM: 300278,310500) nyctalopin precurs ( 481) 296 54.6 5.2e-07 NP_115605 (OMIM: 221200,609681) SLIT and NTRK-like ( 841) 297 55.0 6.8e-07 NP_060960 (OMIM: 606666,615311) leucine-rich repea ( 951) 296 54.9 8.2e-07 XP_011527507 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 292 54.1 9.5e-07 NP_938205 (OMIM: 604808,615271) leucine-rich repea ( 649) 292 54.1 9.5e-07 XP_011527506 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 292 54.1 9.5e-07 XP_005260739 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 292 54.1 9.5e-07 NP_037413 (OMIM: 604808,615271) leucine-rich repea ( 649) 292 54.1 9.5e-07 >>NP_001013675 (OMIM: 613505) leucine-rich repeat-contai (334 aa) initn: 2286 init1: 2286 opt: 2286 Z-score: 1821.1 bits: 345.3 E(85289): 1.1e-94 Smith-Waterman score: 2286; 99.4% identity (99.7% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLASCSAL :::::: :::::::::::::::::::.::::::::::::::::::::::::::::::::: NP_001 MRGPSWSRPRPLLLLLLLLSPWPVWAQVSATASPSGSLGAPDCPEVCTCVPGGLASCSAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 ALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 PLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTA 250 260 270 280 290 300 310 320 330 pF1KE5 ALRPPRPPDPNPDPDPHGCASPADPGSPAAAAQA :::::::::::::::::::::::::::::::::: NP_001 ALRPPRPPDPNPDPDPHGCASPADPGSPAAAAQA 310 320 330 >>NP_001010847 (OMIM: 615212) leucine-rich repeat-contai (294 aa) initn: 547 init1: 368 opt: 464 Z-score: 382.2 bits: 78.9 E(85289): 1.5e-14 Smith-Waterman score: 464; 35.4% identity (60.4% similar) in 260 aa overlap (38-293:21-278) 10 20 30 40 50 60 pF1KE5 RPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPD--CPEVCTCVPGGLASCSALSLPAV : :: :: :.:. ..: .::.: NP_001 MRPRAPACAAAALGLCSLLLLLAPGHACPAGCACTDPHTVDCRDRGLPSV 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 PPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLD : . : .: ::. ::.. .: : : : ::.:.:.:.:.. .: : . : .:: NP_001 PDPFPLDVRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLD 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 LSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPG :: :.: :. :.: : .::::.: :. .. :. .: :. : :.::.: .:. . NP_001 LSYNNLTQLGAGAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVA 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 LLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHP--LPASEAETVLCVWPGRLTLSPLT :. :::: .:.: :::: : : . : .:.... :: . : . : : . : NP_001 ALAALPALRSLRLDGNPWLCDCDFAHLFSWIQENASKLPKGLDE-IQCSLPMESRRISLR 180 190 200 210 220 250 260 270 280 290 300 pF1KE5 AFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALR .:.:.::.: :.: :: .. : : .... : . :.. .. : : NP_001 ELSEASFSECRFSLSLTDLCIIIFSGVAVSIAAIISSFFLAT-VVQCLQRCAPNKDAEDE 230 240 250 260 270 280 310 320 330 pF1KE5 PPRPPDPNPDPDPHGCASPADPGSPAAAAQA NP_001 DEDKDD 290 >>NP_001005210 (OMIM: 615213) leucine-rich repeat-contai (341 aa) initn: 355 init1: 179 opt: 453 Z-score: 372.7 bits: 77.3 E(85289): 5e-14 Smith-Waterman score: 455; 32.4% identity (57.4% similar) in 296 aa overlap (3-290:45-329) 10 20 pF1KE5 MRGPSWLR------PRPLLLLLLLLSPWPVWA : .: . :.: .::. :: . NP_001 SCLPVSQTLDSMDTVLMGSLQHCCCLLPKMGDTWAQLPWPGPPHPAMLLISLLLAAGLM- 20 30 40 50 60 70 30 40 50 60 70 80 pF1KE5 HVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLPAVPPGLSLRLRALLLDHNRVRAL : .: .: :: .::: . ...::. : .::: : . : : : :::. :. NP_001 HSDAGTS---------CPVLCTCR-NQVVDCSSQRLFSVPPDLPMDTRNLSLAHNRITAV 80 90 100 110 120 90 100 110 120 130 140 pF1KE5 PPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFAPLRALR ::: .. :: :::..:.: . : : :::: :.. . : ..: NP_001 PPGYLTCYMELQVLDLHNNSLMELPRGLFLHAKRLAHLDLSYNNFSHVPADMFQEAHGLV 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE5 NLSLAGNR-LARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGNPWGC ...:. : : :..: :. .: ::.:.:. . :: :. : ::.: .:.. :::: : NP_001 HIDLSHNPWLRRVHPQAFQGLMQLRDLDLSYGGLAFLSLEALEGLPGLVTLQIGGNPWVC 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE5 GCALRPLCAWLR-RHPLPASEAETVLCVWPGRLTLSPLTAFSDAAFSHCAQPLALRDLAV ::...:: ::: : ..... . : : .. .:: .... .:. : :.: : NP_001 GCTMEPLLKWLRNRIQRCTADSQLAECRGPPEVEGAPLFSLTEESFKACHLTLTLDDYLF 250 260 270 280 290 300 270 280 290 300 310 320 pF1KE5 VYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPDPNPDPDPHGCASPAD . .: . ..:.:. . :: . : NP_001 IAFVGFVVSIASVATNFLLGITANCCHRWSKASEEEEI 310 320 330 340 >>NP_003052 (OMIM: 603742) slit homolog 1 protein precur (1534 aa) initn: 1205 init1: 292 opt: 419 Z-score: 338.0 bits: 73.1 E(85289): 4.3e-12 Smith-Waterman score: 419; 35.8% identity (63.7% similar) in 204 aa overlap (34-237:273-472) 10 20 30 40 50 60 pF1KE5 PSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLP :. .:.. .:: .::: .:...: . .: NP_003 SGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTC-SNGIVDCRGKGLT 250 260 270 280 290 300 70 80 90 100 110 120 pF1KE5 AVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQL :.: .: . . :. : ....:::::. :.:.:: .: . . :: :: .:. NP_003 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS 310 320 330 340 350 360 130 140 150 160 170 180 pF1KE5 LDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALA : : .:.. : :.:. : .:. : : .:.. ..: :. : : ::: ::.. .:: NP_003 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA 370 380 390 400 410 420 190 200 210 220 230 240 pF1KE5 PGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLSPLT : . : :...::: ::. : : :. : .:: .:. .: :. :. : :: NP_003 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGAR---CASPRRLANKRIG 430 440 450 460 470 250 260 270 280 290 300 pF1KE5 AFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALR NP_003 QIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLKLTKIPERI 480 490 500 510 520 530 >-- initn: 445 init1: 245 opt: 355 Z-score: 287.4 bits: 63.7 E(85289): 2.8e-09 Smith-Waterman score: 355; 32.2% identity (62.5% similar) in 208 aa overlap (43-247:513-716) 20 30 40 50 60 70 pF1KE5 LLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLPAVPPGLSLR ::. : : .... ::.:.: .: . NP_003 KKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRC-EANVVECSSLKLTKIPERIPQS 490 500 510 520 530 540 80 90 100 110 120 130 pF1KE5 LRALLLDHNRVRALPP-GAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQL : :..:.. : : : :....: .: . .. :: : .... : :.:::: NP_003 TAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQL 550 560 570 580 590 600 140 150 160 170 180 190 pF1KE5 EALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLP :.. : : : .::.: : .::.. .. .. .: .: ::: ::......:: . : NP_003 ESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQ 610 620 630 640 650 660 200 210 220 230 240 pF1KE5 ALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLSPL--TAFSDAA .:..:.: .::..:.: : : .:::.. . ... . : : : :: .:: : NP_003 SLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPR---CQNPDFLRQIPLQDVAFPDFR 670 680 690 700 710 250 260 270 280 290 300 pF1KE5 FSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPD NP_003 CEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPG 720 730 740 750 760 770 >-- initn: 570 init1: 257 opt: 264 Z-score: 215.6 bits: 50.4 E(85289): 2.9e-05 Smith-Waterman score: 306; 29.7% identity (51.7% similar) in 286 aa overlap (4-260:5-271) 10 20 30 40 50 pF1KE5 MRGPSWLR---P-RPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLA :.: : :: : ::: . : ::: :: .:::. : . NP_003 MALTPGWGSSAGPVRPELWLLLWAAAW--------------RLGASACPALCTCT-GTTV 10 20 30 40 60 70 80 90 pF1KE5 SCSALSLPAVP---P----------------------GLSLRLRALLLDHNRVRALPPGA .: . .: :.: : ::. .::.: : .:.. :. :: NP_003 DCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLK-QLRVLQLMENQIGAVERGA 50 60 70 80 90 100 100 110 120 130 140 150 pF1KE5 FAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFAPLRALRNLSL : :.:: : .: :: . : . ::. :::: : ..:. .: :.::.: NP_003 FDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQL 110 120 130 140 150 160 160 170 180 190 200 210 pF1KE5 AGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGNPWGCGCALR :... .: .:. :: :. :.:..:..... . ....: : ...:..: : : : NP_003 DKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLA 170 180 190 200 210 220 220 230 240 250 260 270 pF1KE5 PLCAWLRRHPLPASEAETVLCVWPGRLTLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGP : :::..: . .. : :. : .. . . :: .: : : NP_003 WLSQWLRQRPTIGLFTQ---CSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGS 230 240 250 260 270 280 280 290 300 310 320 330 pF1KE5 ASFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPDPNPDPDPHGCASPADPGSPAA NP_003 CPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLS 290 300 310 320 330 340 >>XP_016877935 (OMIM: 614179) PREDICTED: immunoglobulin (468 aa) initn: 380 init1: 334 opt: 399 Z-score: 328.4 bits: 69.6 E(85289): 1.5e-11 Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233) 10 20 30 40 50 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC : ::: .....: ::: :.:: .:.: XP_016 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC 10 20 30 60 70 80 90 100 110 pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG . : :: :: . .: :. :.. .: :::: . . : : .: ...:. :. XP_016 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN :. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...: XP_016 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL .: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : : XP_016 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL :. . :. :: : XP_016 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL 220 230 240 250 260 270 >>NP_001123610 (OMIM: 614179) immunoglobulin superfamily (745 aa) initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11 Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233) 10 20 30 40 50 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC : ::: .....: ::: :.:: .:.: NP_001 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC 10 20 30 60 70 80 90 100 110 pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG . : :: :: . .: :. :.. .: :::: . . : : .: ...:. :. NP_001 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN :. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...: NP_001 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL .: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : : NP_001 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL :. . :. :: : NP_001 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL 220 230 240 250 260 270 >>XP_011520143 (OMIM: 614179) PREDICTED: immunoglobulin (745 aa) initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11 Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233) 10 20 30 40 50 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC : ::: .....: ::: :.:: .:.: XP_011 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC 10 20 30 60 70 80 90 100 110 pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG . : :: :: . .: :. :.. .: :::: . . : : .: ...:. :. XP_011 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN :. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...: XP_011 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL .: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : : XP_011 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL :. . :. :: : XP_011 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL 220 230 240 250 260 270 >>NP_065902 (OMIM: 614179) immunoglobulin superfamily co (745 aa) initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11 Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233) 10 20 30 40 50 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC : ::: .....: ::: :.:: .:.: NP_065 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC 10 20 30 60 70 80 90 100 110 pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG . : :: :: . .: :. :.. .: :::: . . : : .: ...:. :. NP_065 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN :. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...: NP_065 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL .: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : : NP_065 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL :. . :. :: : NP_065 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL 220 230 240 250 260 270 >>XP_011520142 (OMIM: 614179) PREDICTED: immunoglobulin (745 aa) initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11 Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233) 10 20 30 40 50 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC : ::: .....: ::: :.:: .:.: XP_011 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC 10 20 30 60 70 80 90 100 110 pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG . : :: :: . .: :. :.. .: :::: . . : : .: ...:. :. XP_011 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN :. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...: XP_011 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL .: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : : XP_011 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL :. . :. :: : XP_011 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL 220 230 240 250 260 270 >>NP_001123609 (OMIM: 614179) immunoglobulin superfamily (745 aa) initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11 Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233) 10 20 30 40 50 pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC : ::: .....: ::: :.:: .:.: NP_001 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC 10 20 30 60 70 80 90 100 110 pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG . : :: :: . .: :. :.. .: :::: . . : : .: ...:. :. NP_001 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN :. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...: NP_001 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL .: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : : NP_001 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL :. . :. :: : NP_001 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL 220 230 240 250 260 270 334 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:11:14 2016 done: Tue Nov 8 04:11:15 2016 Total Scan time: 7.710 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]