FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4380, 400 aa 1>>>pF1KE4380 400 - 400 aa - 400 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9540+/-0.00102; mu= 1.8485+/- 0.061 mean_var=214.8927+/-42.826, 0's: 0 Z-trim(111.3): 17 B-trim: 12 in 1/50 Lambda= 0.087491 statistics sampled from 12248 (12257) to 12248 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.377), width: 16 Scan time: 3.120 The best scores are: opt bits E(32554) CCDS35054.1 GOLM1 gene_id:51280|Hs108|chr9 ( 401) 2600 340.7 1.4e-93 >>CCDS35054.1 GOLM1 gene_id:51280|Hs108|chr9 (401 aa) initn: 2600 init1: 2600 opt: 2600 Z-score: 1793.4 bits: 340.7 E(32554): 1.4e-93 Smith-Waterman score: 2600; 100.0% identity (100.0% similar) in 400 aa overlap (1-400:2-401) 10 20 30 40 50 pF1KE4 MGLGNGRRSMKSPPLVLAALVACIIVLGFNYWIASSRSVDLQTRIMELEGRVRRAAAER ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MMGLGNGRRSMKSPPLVLAALVACIIVLGFNYWIASSRSVDLQTRIMELEGRVRRAAAER 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 GAVELKKNEFQGELEKQREQLDKIQSSHNFQLESVNKLYQDEKAVLVNNITTGERLIRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GAVELKKNEFQGELEKQREQLDKIQSSHNFQLESVNKLYQDEKAVLVNNITTGERLIRVL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 QDQLKTLQRNYGRLQQDVLQFQKNQTNLERKFSYDLSQCINQMKEVKEQCEERIEEVTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 QDQLKTLQRNYGRLQQDVLQFQKNQTNLERKFSYDLSQCINQMKEVKEQCEERIEEVTKK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 GNEAVASRDLSENNDQRQQLQALSEPQPRLQAAGLPHTEVPQGKGNVLGNSKSQTPAPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GNEAVASRDLSENNDQRQQLQALSEPQPRLQAAGLPHTEVPQGKGNVLGNSKSQTPAPSS 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 EVVLDSKRQVEKEETNEIQVVNEEPQRDRLPQEPGREQVVEDRPVGGRGFGGAGELGQTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 EVVLDSKRQVEKEETNEIQVVNEEPQRDRLPQEPGREQVVEDRPVGGRGFGGAGELGQTP 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 QVQAALSVSQENPEMEGPERDQLVIPDGQEEEQEAAGEGRNQQKLRGEDDYNMDENEAES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 QVQAALSVSQENPEMEGPERDQLVIPDGQEEEQEAAGEGRNQQKLRGEDDYNMDENEAES 310 320 330 340 350 360 360 370 380 390 400 pF1KE4 ETDKQAALAGNDRNIDVFNVEDQKRDTINLLDQREKRNHTL ::::::::::::::::::::::::::::::::::::::::: CCDS35 ETDKQAALAGNDRNIDVFNVEDQKRDTINLLDQREKRNHTL 370 380 390 400 400 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:59:54 2016 done: Sat Nov 5 22:59:55 2016 Total Scan time: 3.120 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]