FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3189, 432 aa 1>>>pF1KE3189 432 - 432 aa - 432 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.4268+/-0.000443; mu= -17.7544+/- 0.028 mean_var=589.1855+/-122.303, 0's: 0 Z-trim(125.4): 98 B-trim: 469 in 1/60 Lambda= 0.052838 statistics sampled from 48863 (48993) to 48863 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.821), E-opt: 0.2 (0.574), width: 16 Scan time: 11.710 The best scores are: opt bits E(85289) XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte ( 439) 613 61.0 6.9e-09 NP_004487 (OMIM: 602294) hepatocyte nuclear factor ( 472) 613 61.1 7.3e-09 NP_710141 (OMIM: 600288) hepatocyte nuclear factor ( 457) 611 60.9 7.9e-09 NP_068556 (OMIM: 600288) hepatocyte nuclear factor ( 463) 611 60.9 8e-09 NP_004465 (OMIM: 602211) forkhead box protein D2 [ ( 495) 604 60.4 1.2e-08 NP_036315 (OMIM: 607836,611539) forkhead box prote ( 478) 600 60.1 1.5e-08 NP_004464 (OMIM: 241850,602617,616534) forkhead bo ( 373) 594 59.5 1.7e-08 NP_004488 (OMIM: 602295) hepatocyte nuclear factor ( 350) 546 55.8 2e-07 NP_004463 (OMIM: 601091) forkhead box protein D1 [ ( 465) 544 55.8 2.8e-07 NP_005241 (OMIM: 603252) forkhead box protein L1 [ ( 345) 516 53.5 9.8e-07 NP_005242 (OMIM: 153400,602402) forkhead box prote ( 501) 520 54.0 1e-06 NP_036318 (OMIM: 107250,601094,610256) forkhead bo ( 319) 511 53.1 1.2e-06 NP_036316 (OMIM: 611084) forkhead box protein D4-l ( 408) 492 51.8 3.9e-06 NP_001444 (OMIM: 601090,601631,602482) forkhead bo ( 553) 495 52.1 4.2e-06 NP_004109 (OMIM: 602939) forkhead box protein S1 [ ( 330) 486 51.2 4.6e-06 NP_954714 (OMIM: 611085) forkhead box protein D4-l ( 416) 478 50.7 8.3e-06 NP_954586 (OMIM: 611086) forkhead box protein D4-l ( 417) 476 50.6 9.3e-06 NP_997188 (OMIM: 601092) forkhead box protein D4 [ ( 439) 462 49.5 2e-05 NP_075555 (OMIM: 110100,605597,608996) forkhead bo ( 376) 459 49.2 2.1e-05 NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378) 452 48.7 3.1e-05 NP_001129121 (OMIM: 612351) forkhead box protein I ( 420) 451 48.7 3.5e-05 XP_011513493 (OMIM: 616302) PREDICTED: forkhead bo ( 570) 437 47.7 9.1e-05 NP_001032242 (OMIM: 616302) forkhead box protein K ( 733) 437 47.8 0.00011 NP_001442 (OMIM: 265380,601089) forkhead box prote ( 379) 420 46.2 0.00017 NP_001443 (OMIM: 603250) forkhead box protein F2 [ ( 444) 422 46.5 0.00017 NP_005240 (OMIM: 164874,613454) forkhead box prote ( 489) 418 46.2 0.00022 NP_004505 (OMIM: 147685) forkhead box protein K2 [ ( 660) 381 43.5 0.0019 NP_001445 (OMIM: 602291) forkhead box protein J1 [ ( 421) 366 42.2 0.0031 NP_150285 (OMIM: 612788) forkhead box protein Q1 [ ( 403) 362 41.9 0.0037 >>XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte nucl (439 aa) initn: 610 init1: 553 opt: 613 Z-score: 280.5 bits: 61.0 E(85289): 6.9e-09 Smith-Waterman score: 639; 38.4% identity (58.4% similar) in 305 aa overlap (6-306:130-422) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLP : :: ::::::::: .::::.. ::: XP_016 AMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLITMAIQQAPSKMLT 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE3 LSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGD ::.::..::. :::::.. ::::::.::.:::::::.:. : ::.:::::.:.:::: :. XP_016 LSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGN 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE3 MFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGA--GPGGHLHPHHHHHPHHHHHHHAA ::::: .:::.:::: . . .:: ... :: :: .. : .: : . XP_016 MFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRG 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE3 AHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSH .: . . : : : : . : . :: .: . : ... : : XP_016 VHGKTGQLEGAPAPGPAASPQTLDH----SGATATGGASELKT-----PASSTAPPISSG 280 290 300 310 320 330 220 230 240 250 260 270 pF1KE3 PGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPF-AI :: . :.: :. : . : : .:. : :... . ..: . : : : XP_016 PGAL---ASVPASHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAY 340 350 360 370 380 280 290 300 310 320 330 pF1KE3 ENIIGRDYKGVLQAGGLPLASVMHHLGYPV-PGQLGNVVSSVWPHVGVMDSVAAAAAAAA :. . . : ..:::.:. :. :. : XP_016 EQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGVYSRPVLNTS 390 400 410 420 430 340 350 360 370 380 390 pF1KE3 AAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQP >>NP_004487 (OMIM: 602294) hepatocyte nuclear factor 3-a (472 aa) initn: 610 init1: 553 opt: 613 Z-score: 280.1 bits: 61.1 E(85289): 7.3e-09 Smith-Waterman score: 639; 38.4% identity (58.4% similar) in 305 aa overlap (6-306:163-455) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLP : :: ::::::::: .::::.. ::: NP_004 AMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLITMAIQQAPSKMLT 140 150 160 170 180 190 40 50 60 70 80 90 pF1KE3 LSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGD ::.::..::. :::::.. ::::::.::.:::::::.:. : ::.:::::.:.:::: :. NP_004 LSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGN 200 210 220 230 240 250 100 110 120 130 140 150 pF1KE3 MFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGA--GPGGHLHPHHHHHPHHHHHHHAA ::::: .:::.:::: . . .:: ... :: :: .. : .: : . NP_004 MFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRG 260 270 280 290 300 310 160 170 180 190 200 210 pF1KE3 AHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSH .: . . : : : : . : . :: .: . : ... : : NP_004 VHGKTGQLEGAPAPGPAASPQTLDH----SGATATGGASELKT-----PASSTAPPISSG 320 330 340 350 360 220 230 240 250 260 270 pF1KE3 PGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPF-AI :: . :.: :. : . : : .:. : :... . ..: . : : : NP_004 PGAL---ASVPASHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAY 370 380 390 400 410 420 280 290 300 310 320 330 pF1KE3 ENIIGRDYKGVLQAGGLPLASVMHHLGYPV-PGQLGNVVSSVWPHVGVMDSVAAAAAAAA :. . . : ..:::.:. :. :. : NP_004 EQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGVYSRPVLNTS 430 440 450 460 470 340 350 360 370 380 390 pF1KE3 AAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQP >>NP_710141 (OMIM: 600288) hepatocyte nuclear factor 3-b (457 aa) initn: 690 init1: 567 opt: 611 Z-score: 279.5 bits: 60.9 E(85289): 7.9e-09 Smith-Waterman score: 647; 43.8% identity (62.7% similar) in 233 aa overlap (2-214:148-375) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAE :. . ::. ::::::::: .::::.: . NP_710 AGAMGGLAPYANMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPN 120 130 140 150 160 170 40 50 60 70 80 90 pF1KE3 KMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHP ::: ::.::..::. ::.::.. ::::::.::.:::::::.:.:: ::.:::::::.::: NP_710 KMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHP 180 190 200 210 220 230 100 110 120 130 pF1KE3 DCGDMFENGSFLRRRKRFKVLRADHTHLHAGST----KSAPGA-----------GPG--- : :.::::: .:::.:::: . . ::.. :.: :: ::. NP_710 DSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASET 240 250 260 270 280 290 140 150 160 170 180 190 pF1KE3 --GHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPP : :: : ..:.. . .. . :: : : : . .:: . : NP_710 PAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQ-----QQQAAAHLLGP 300 310 320 330 340 350 200 210 220 230 240 250 pF1KE3 PHLPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGS :: :. ::. . . .:: NP_710 PHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP 360 370 380 390 400 410 >>NP_068556 (OMIM: 600288) hepatocyte nuclear factor 3-b (463 aa) initn: 737 init1: 567 opt: 611 Z-score: 279.4 bits: 60.9 E(85289): 8e-09 Smith-Waterman score: 647; 43.8% identity (62.7% similar) in 233 aa overlap (2-214:154-381) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAE :. . ::. ::::::::: .::::.: . NP_068 AGAMGGLAPYANMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPN 130 140 150 160 170 180 40 50 60 70 80 90 pF1KE3 KMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHP ::: ::.::..::. ::.::.. ::::::.::.:::::::.:.:: ::.:::::::.::: NP_068 KMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHP 190 200 210 220 230 240 100 110 120 130 pF1KE3 DCGDMFENGSFLRRRKRFKVLRADHTHLHAGST----KSAPGA-----------GPG--- : :.::::: .:::.:::: . . ::.. :.: :: ::. NP_068 DSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASET 250 260 270 280 290 300 140 150 160 170 180 190 pF1KE3 --GHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPP : :: : ..:.. . .. . :: : : : . .:: . : NP_068 PAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQ-----QQQAAAHLLGP 310 320 330 340 350 200 210 220 230 240 250 pF1KE3 PHLPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGS :: :. ::. . . .:: NP_068 PHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP 360 370 380 390 400 410 >>NP_004465 (OMIM: 602211) forkhead box protein D2 [Homo (495 aa) initn: 501 init1: 501 opt: 604 Z-score: 276.2 bits: 60.4 E(85289): 1.2e-08 Smith-Waterman score: 608; 37.4% identity (56.3% similar) in 318 aa overlap (2-287:115-429) 10 20 30 pF1KE3 MPRPGKSSYSDQ-KPPYSYISLTAMAIQHSA : : .. : :::::::.: .::: .: NP_004 LASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSP 90 100 110 120 130 140 40 50 60 70 80 90 pF1KE3 EKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALH .: : ::.: .:: :::::::. ::::.:::::.::::.::::.: .::::..:.: NP_004 KKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 150 160 170 180 190 200 100 110 120 130 140 pF1KE3 PDCGDMFENGSFLRRRKRFKV--LRADHTHLHAGST----KSAPGAGPGGHLHPHHHHHP :. .:::.:::::::::::: : : : : .: .:: : . : . NP_004 PESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYG 210 220 230 240 250 260 150 160 170 180 190 200 pF1KE3 HHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAP---QPPPHLPSQPPQQ . . . : . :: : : : : :: . : .:: . :: . :: NP_004 AYGYGYGLALPAYGA--PPPGPAPHPHPHPH-AFAFAAAAAAAPCQLSVPPGRAAAPPPG 270 280 290 300 310 320 210 220 230 240 pF1KE3 PPQQS-----------QPQQPSHPGK----------MQEAAAVAAAAAAAAAAAVGSVGR :: : : . : :: . . : : ::. . :.:... NP_004 PPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAG 330 340 350 360 370 380 250 260 270 280 290 pF1KE3 L-SQFPPYGLGSAAAAAAAAAASTSGFKHPFAIENIIGRDYKGVLQAGGLPLASVMHHLG : . . :: . :...:..... .: . :.:..:.:. :. : NP_004 LPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAA 390 400 410 420 430 440 300 310 320 330 340 350 pF1KE3 YPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSASQSL NP_004 AAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF 450 460 470 480 490 >>NP_036315 (OMIM: 607836,611539) forkhead box protein D (478 aa) initn: 526 init1: 488 opt: 600 Z-score: 274.7 bits: 60.1 E(85289): 1.5e-08 Smith-Waterman score: 620; 37.5% identity (57.9% similar) in 363 aa overlap (4-336:132-476) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKM :.: . : :::::::.: .::: .: .: NP_036 DGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKK 110 120 130 140 150 160 40 50 60 70 80 90 pF1KE3 LPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDC : :: : .:: .:::::::. ::::.:::::.::::.::::.: .::::..:.: :. NP_036 LTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQS 170 180 190 200 210 220 100 110 120 130 140 pF1KE3 GDMFENGSFLRRRKRFKVLRADH----THLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHH :::.:::::::::::: . .: : : : . :. .: :. .:. : NP_036 EDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYG--RPYGLHP 230 240 250 260 270 150 160 170 180 190 200 pF1KE3 HHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQP- ::. . : : ..: . ::.:: :: .: : . ... NP_036 AAAAGAYSH------PAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAF 280 290 300 310 320 330 210 220 230 240 250 pF1KE3 QQPSHPG-KMQEAAAVAAAAAAAAAAAVGSVGRLSQFPP-----------YGLGSAA--- . :: ..: . ::::::..:.:.:... : . : : : :: NP_036 GSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENIIGGGPAAPGG 340 350 360 370 380 390 260 270 280 290 300 pF1KE3 -AAAAAAAASTSGFKHPFAIENII---GRDYKGVLQAGGLPL------ASVMHHLGYPVP :..:..:..:.: . .... : ...:.: :: :.. :. :. NP_036 SAVGAGVAGGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLS 400 410 420 430 440 450 310 320 330 340 350 360 pF1KE3 GQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSASQSLPAMP ::. . : . :.:::::::: : : NP_036 GQF------LQPAA----SAAAAAAAAAQAKWPAQ 460 470 370 380 390 400 410 420 pF1KE3 VPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVCSAAAASPVASLLEPTAPTSAESKGG >>NP_004464 (OMIM: 241850,602617,616534) forkhead box pr (373 aa) initn: 575 init1: 497 opt: 594 Z-score: 273.6 bits: 59.5 E(85289): 1.7e-08 Smith-Waterman score: 603; 37.9% identity (57.7% similar) in 338 aa overlap (13-338:53-365) 10 20 30 40 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKF :::::::.: :::: :. :. : :. :::: NP_004 GETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKF 30 40 50 60 70 80 50 60 70 80 90 100 pF1KE3 IMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSF : ::::.::.. ..::::.::::..::::.::::. .::::..::: :. ::::.::: NP_004 ITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSF 90 100 110 120 130 140 110 120 130 140 150 pF1KE3 LRRRKRFKVLRAD------HTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHH :::::::: :.: . : :... .: .:. .. . : : . . .:.. NP_004 LRRRKRFK--RSDLSTYPAYMHDAAAAAAAAAAAAAAAAIFPGAV--PAARPPYPGAVYA 150 160 170 180 190 160 170 180 190 200 210 pF1KE3 HHHHHPPQ---PPP---PPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQ . ::. ::: : : : : . . : .:. : :: : . : NP_004 GYA--PPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPA-PSGPGGSCAFASAGAP 200 210 220 230 240 250 220 230 240 250 260 270 pF1KE3 PSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPF . : .: :. ..: : .: :.. .: . .: : ::: :::. : : : NP_004 ATTTG-YQPAGCTGARPANPSAYAAAYAGPDGAYPQ-GAGSAIFAAAGRLA---GPASPP 260 270 280 290 300 310 280 290 300 310 320 330 pF1KE3 AIENIIGRDYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAA : : : ..::. ... : :::.: . . : . . :.: : NP_004 A-----G----G--SSGGV--ETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGAYHAR 320 330 340 350 340 350 360 370 380 390 pF1KE3 AAAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQ ::. : : NP_004 HAAAYPGGIDRFVSAM 360 370 >>NP_004488 (OMIM: 602295) hepatocyte nuclear factor 3-g (350 aa) initn: 711 init1: 543 opt: 546 Z-score: 254.2 bits: 55.8 E(85289): 2e-07 Smith-Waterman score: 576; 50.6% identity (69.2% similar) in 172 aa overlap (1-172:105-260) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSA ::. . . ::::::::: .::::.. NP_004 GPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAP 80 90 100 110 120 130 40 50 60 70 80 90 pF1KE3 EKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALH ::: ::.::..::. ::::::. ::::::.::.:::::::.:. : ::.:::::.:::: NP_004 GKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALH 140 150 160 170 180 190 100 110 120 130 140 150 pF1KE3 PDCGDMFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHH :. :.::::: .:::.::::. . . ...: . :.: .. : NP_004 PSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTT-----P------ 200 210 220 230 240 160 170 180 190 200 210 pF1KE3 HAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQ ::. ::::::: : : NP_004 -AATVTS----PPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPY 250 260 270 280 290 >>NP_004463 (OMIM: 601091) forkhead box protein D1 [Homo (465 aa) initn: 631 init1: 482 opt: 544 Z-score: 251.8 bits: 55.8 E(85289): 2.8e-07 Smith-Waterman score: 631; 36.9% identity (52.9% similar) in 420 aa overlap (13-428:125-455) 10 20 30 40 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKF :::::::.: .::: .: .: : ::.: .: NP_004 AAGAGAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEF 100 110 120 130 140 150 50 60 70 80 90 100 pF1KE3 IMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSF : :::::::. ::::.:::::.::::.::::.: .::::..:.: :. .:::.:::: NP_004 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSF 160 170 180 190 200 210 110 120 130 140 150 pF1KE3 LRRRKRFKVLRADHTHLHAGSTKSA--PGAGP-GGHLHPHHHHHPHHHHHHHAAAHHHHH :::::::: : .:....: ::: :: : ::: NP_004 LRRRKRFK--RQPLLPPNAAAAESLLLRGAGAAGGAGDPAA-----------AAALF--- 220 230 240 250 160 170 180 190 200 210 pF1KE3 HHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSHPGKMQE :: :::::: : .: . . :: :: NP_004 -------PPAPPPPPHAYGY-------GPYGCGYGLQLPPYAPP---------------- 260 270 280 220 230 240 250 260 270 pF1KE3 AAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFK-HPFAIENIIGR .: ::::::::::: . ::.: ::: : .. :.. ::.. . : NP_004 SALFAAAAAAAAAAAFHPHSPPPPPPPHG------AAAELARTAFGYRPHPLGAA-LPGP 290 300 310 320 330 340 280 290 300 310 320 330 pF1KE3 DYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVG .. .::: : ::.. . . . . .: : . .::::::: :: NP_004 LPASAAKAGG-PGASALARSPFSIESIIG----------GSLGPAAAAAAAAQAA----- 350 360 370 380 340 350 360 370 380 390 pF1KE3 PEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVC .:.:. :. : :. : ::. . . : . :. : : : NP_004 ---------------AAAQASPS-PSPV----AAPPAPGSSGGGCAAQAAVGPAAALTRS 390 400 410 420 400 410 420 430 pF1KE3 SAAAASPVASLLEPTAPTSAESKGGSLHSVLVHS .:::. .:: . .: .. .: .: :: NP_004 LVAAAAAAASSVSSSAALGTLHQGTALSSVENFTARISNC 430 440 450 460 >>NP_005241 (OMIM: 603252) forkhead box protein L1 [Homo (345 aa) initn: 527 init1: 469 opt: 516 Z-score: 241.9 bits: 53.5 E(85289): 9.8e-07 Smith-Waterman score: 529; 36.1% identity (57.4% similar) in 305 aa overlap (10-313:46-297) 10 20 30 pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDI . ::::::::.: ::::: . :. . :. : NP_005 PMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGI 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE3 YKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFEN :.:::.:::.:... : ::::.:::::.::::.:.::. .:::::.:.: : : ::::: NP_005 YQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFEN 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE3 GSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHHHH :.. ::::: : :::. :. .. :. . :...: . NP_005 GNY-RRRKR------------------KPKPGPGA---PEAKR-PRAETHQRSAEAQ--- 140 150 160 160 170 180 190 200 210 pF1KE3 HHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSH-PGKMQ :. : . . : :..:.: :: :: : : :: . NP_005 ---PEAGSGAGGSGPAISRL--QAAPAGPSPLLDGPS-PPA----------PLHWPGTAS 170 180 190 200 210 220 230 240 250 260 270 pF1KE3 EAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPFAIENIIGR .. :: .:::.:::...: .. : :: :. .. ..: .. :.:..:.. NP_005 PNEDAGDAAQGAAAVAVGQAARTGDGP----GSPLRPASRSSPKSSDKSKSFSIDSILA- 220 230 240 250 260 280 290 300 310 320 330 pF1KE3 DYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVG .: .: : :: :: : . .:. NP_005 GKQGQKPPSGDEL------LGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGGF 270 280 290 300 310 320 340 350 360 370 380 390 pF1KE3 PEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVC NP_005 YQLGIPFLSYFPLQVPDTVLHFQ 330 340 432 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 02:09:08 2016 done: Tue Nov 8 02:09:10 2016 Total Scan time: 11.710 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]