FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0797, 1572 aa 1>>>pF1KE0797 1572 - 1572 aa - 1572 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 15.5734+/-0.00132; mu= -19.6819+/- 0.080 mean_var=663.5545+/-135.112, 0's: 0 Z-trim(116.3): 127 B-trim: 0 in 0/54 Lambda= 0.049789 statistics sampled from 16747 (16862) to 16747 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.518), width: 16 Scan time: 7.370 The best scores are: opt bits E(32554) CCDS34978.1 SMARCA2 gene_id:6595|Hs108|chr9 (1572) 10527 772.4 0 CCDS34977.1 SMARCA2 gene_id:6595|Hs108|chr9 (1590) 9415 692.5 2.8e-198 CCDS54218.1 SMARCA4 gene_id:6597|Hs108|chr19 (1613) 6400 475.9 4.5e-133 CCDS54217.1 SMARCA4 gene_id:6597|Hs108|chr19 (1614) 6364 473.3 2.7e-132 CCDS45973.1 SMARCA4 gene_id:6597|Hs108|chr19 (1616) 6320 470.2 2.4e-131 CCDS45972.1 SMARCA4 gene_id:6597|Hs108|chr19 (1617) 6313 469.7 3.4e-131 CCDS83338.1 SMARCA2 gene_id:6595|Hs108|chr9 (1514) 5900 440.0 2.8e-122 CCDS12253.1 SMARCA4 gene_id:6597|Hs108|chr19 (1647) 5584 417.3 2e-115 CCDS75807.1 SMARCA2 gene_id:6595|Hs108|chr9 ( 248) 1590 129.8 1.1e-29 CCDS83339.1 SMARCA2 gene_id:6595|Hs108|chr9 ( 276) 1585 129.5 1.5e-29 CCDS75808.1 SMARCA2 gene_id:6595|Hs108|chr9 ( 278) 1585 129.5 1.5e-29 CCDS47865.1 CHD7 gene_id:55636|Hs108|chr8 (2997) 1144 98.6 3.2e-19 CCDS32555.1 CHD3 gene_id:1107|Hs108|chr17 (1966) 1055 92.1 2e-17 CCDS32554.1 CHD3 gene_id:1107|Hs108|chr17 (2000) 1055 92.1 2e-17 CCDS32553.2 CHD3 gene_id:1107|Hs108|chr17 (2059) 1055 92.1 2e-17 CCDS57.1 CHD5 gene_id:26038|Hs108|chr1 (1954) 1040 91.0 4.1e-17 CCDS53885.1 CHD8 gene_id:57680|Hs108|chr14 (2581) 1037 90.8 5.9e-17 CCDS76510.1 CHD4 gene_id:1108|Hs108|chr12 (1905) 1032 90.4 6e-17 CCDS8552.1 CHD4 gene_id:1108|Hs108|chr12 (1912) 1032 90.4 6e-17 CCDS45081.1 CHD8 gene_id:57680|Hs108|chr14 (2302) 1032 90.5 7e-17 CCDS13317.1 CHD6 gene_id:84181|Hs108|chr20 (2715) 1026 90.1 1.1e-16 CCDS45485.1 CHD9 gene_id:80205|Hs108|chr16 (2881) 1014 89.2 2e-16 CCDS76865.1 CHD9 gene_id:80205|Hs108|chr16 (2897) 1014 89.2 2e-16 CCDS10071.1 INO80 gene_id:54617|Hs108|chr15 (1556) 902 81.0 3.3e-14 CCDS7229.1 ERCC6 gene_id:2074|Hs108|chr10 (1493) 882 79.5 8.7e-14 CCDS10689.2 SRCAP gene_id:10847|Hs108|chr16 (3230) 848 77.3 8.6e-13 >>CCDS34978.1 SMARCA2 gene_id:6595|Hs108|chr9 (1572 aa) initn: 10527 init1: 10527 opt: 10527 Z-score: 4104.9 bits: 772.4 E(32554): 0 Smith-Waterman score: 10527; 100.0% identity (100.0% similar) in 1572 aa overlap (1-1572:1-1572) 10 20 30 40 50 60 pF1KE0 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE0 ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE0 LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE0 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE0 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE0 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE0 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE0 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE0 MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE0 IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE0 VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE0 AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE0 RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE0 TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE0 PKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KE0 HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KE0 EEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE 1510 1520 1530 1540 1550 1560 1570 pF1KE0 REQSEGSGTDDE :::::::::::: CCDS34 REQSEGSGTDDE 1570 >>CCDS34977.1 SMARCA2 gene_id:6595|Hs108|chr9 (1590 aa) initn: 9415 init1: 9415 opt: 9415 Z-score: 3673.2 bits: 692.5 E(32554): 2.8e-198 Smith-Waterman score: 10481; 98.9% identity (98.9% similar) in 1590 aa overlap (1-1572:1-1590) 10 20 30 40 50 60 pF1KE0 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE0 ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE0 LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE0 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE0 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE0 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE0 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE0 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE0 MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE0 IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE0 VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE0 AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE0 RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE0 TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 pF1KE0 PKLTKQMNAIIDTVINYKD------------------SSGRQLSEVFIQLPSRKELPEYY ::::::::::::::::::: ::::::::::::::::::::::: CCDS34 PKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYY 1390 1400 1410 1420 1430 1440 1430 1440 1450 1460 1470 1480 pF1KE0 ELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK 1450 1460 1470 1480 1490 1500 1490 1500 1510 1520 1530 1540 pF1KE0 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNR 1510 1520 1530 1540 1550 1560 1550 1560 1570 pF1KE0 GKAKPVVSDFDSDEEQDEREQSEGSGTDDE :::::::::::::::::::::::::::::: CCDS34 GKAKPVVSDFDSDEEQDEREQSEGSGTDDE 1570 1580 1590 >>CCDS54218.1 SMARCA4 gene_id:6597|Hs108|chr19 (1613 aa) initn: 7066 init1: 4040 opt: 6400 Z-score: 2502.6 bits: 475.9 E(32554): 4.5e-133 Smith-Waterman score: 8141; 76.6% identity (89.0% similar) in 1624 aa overlap (1-1570:1-1613) 10 20 30 40 50 pF1KE0 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT :::: : :. :.:::::::::::: .::::::: ::::.::::::::::::..::.:: CCDS54 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ .: .::..:::::::....:.::. .: . ..::: ::: : ::::: :::::::: CCDS54 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP :: :::::. ::.:::. ..::. ::: . :: . : ::::..: ::::.::. CCDS54 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 120 130 140 150 160 170 180 190 200 210 220 pF1KE0 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQ---------- :::::::::.::::::::::::. ::.:::::: .::.:::. . CCDS54 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGP 180 190 200 210 220 230 230 240 250 260 270 pF1KE0 -----------QQQQQQQQQQQQPQQQPPQPQT----QQQQQPALVNYNRPSGPGPELSG . .. . . :.. :: :. . : :. : :: . .. CCDS54 GPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAA 240 250 260 270 280 290 280 290 300 310 320 pF1KE0 P-STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQLQQKQSRI : :::::: : : :::::::::. ::::. : :.. .:. :.::.:.. :.:::::: CCDS54 PTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRI 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE0 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNF .:::::.::::::::::::::::::::::::::::::::: :::::::.:::::::::: CCDS54 TPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNF 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE0 QRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKH :::::::::.::::::.::::::.:::::::::.:::::.:::::::::::::::::::: CCDS54 QRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH 420 430 440 450 460 470 450 460 470 480 490 500 pF1KE0 QEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMA :::::::::::::::::::::.::::::.:::::.:::::::::::.::::::::::::: CCDS54 QEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMA 480 490 500 510 520 530 510 520 530 540 550 560 pF1KE0 EDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE :::::::::::::::.:::::::::::::::::.:: .:: ::.::::::....:: : CCDS54 EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKK--AE 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE0 NAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYE :::: :.::::::.::.:::::::::: :.:.::.: : .::::.::.:::::::::: CCDS54 NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYE 600 610 620 630 640 650 630 640 650 660 670 680 pF1KE0 VAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKDAKQIIETA :::::::::: :. :::.::::. . :.: . ::.:..::: ::..:::.: CCDS54 VAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENA 660 670 680 690 700 710 690 700 710 720 730 740 pF1KE0 KQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYN ::::::::.. : ::: ::::.::::..:::.:::::..::.::.::..::::.::::: CCDS54 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 720 730 740 750 760 770 750 760 770 780 790 800 pF1KE0 NNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVV :::::::::::::::::::::::::::::::.:::.::::::::::::.::::::::::: CCDS54 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 780 790 800 810 820 830 810 820 830 840 850 860 pF1KE0 KISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH :.::::.:: ::..:::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 840 850 860 870 880 890 870 880 890 900 910 920 pF1KE0 CKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS54 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 900 910 920 930 940 950 930 940 950 960 970 980 pF1KE0 GERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRH ::.::::::::::::::::::::::::::::::::.::::::::::::::::::..:::: CCDS54 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 960 970 980 990 1000 1010 990 1000 1010 1020 1030 1040 pF1KE0 MQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVI :::::.:::::::::::::::.:::::::::::::::::::::::::::.::::...:.. CCDS54 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1020 1030 1040 1050 1060 1070 1050 1060 1070 1080 1090 1100 pF1KE0 NGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTT .: .:::::::::::::::::::::::.:::::::::::::::::::.:.: :::::::: CCDS54 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1080 1090 1100 1110 1120 1130 1110 1120 1130 1140 1150 1160 pF1KE0 KSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA :.:::. ::: ::::::.::::::::::::::::::.::::.:::::::::::::::::: CCDS54 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1140 1150 1160 1170 1180 1190 1170 1180 1190 1200 1210 1220 pF1KE0 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1200 1210 1220 1230 1240 1250 1230 1240 1250 1260 1270 1280 pF1KE0 LEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDEL :::::..:::::::::::.::::::.:::::::::::.:::::.:::::::::::::::: CCDS54 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1260 1270 1280 1290 1300 1310 1290 1300 1310 1320 1330 1340 pF1KE0 PSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEE ::::::::::::::::::::::.::::::.:..:::::.:::::::.:::.:.:::.::: CCDS54 PSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEE 1320 1330 1340 1350 1360 1370 1350 1360 1370 1380 pF1KE0 VRLKKRKRRRNVDKD-----PA-------KEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN :: :: .:.:. :.: :. :.: : .:.::::::::::::::.:::.:. CCDS54 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1380 1390 1400 1410 1420 1430 1390 1400 1410 1420 1430 1440 pF1KE0 AIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGD :.:.::.::::::::::::::::::::::::::::::::::::::::::::::::::.: CCDS54 KIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1440 1450 1460 1470 1480 1490 1450 1460 1470 1480 1490 1500 pF1KE0 LEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEE :::::::::.:::::::::: :::::::::::: :.:::: ::..:: : .::::: .:: CCDS54 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1500 1510 1520 1530 1540 1550 1510 1520 1530 1540 1550 1560 pF1KE0 ESESEAKSVKVKIKLNKKDDKGRDKGKG-KKRPNRG-KAKPVVSDFDSDEEQDEREQSEG ::::..::::::::..:. :..:. :: ..::.:: .::::::: ::.:::.: ... : CCDS54 GSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSG 1560 1570 1580 1590 1600 1570 pF1KE0 SGTDDE : : CCDS54 SEED 1610 >>CCDS54217.1 SMARCA4 gene_id:6597|Hs108|chr19 (1614 aa) initn: 6900 init1: 4045 opt: 6364 Z-score: 2488.7 bits: 473.3 E(32554): 2.7e-132 Smith-Waterman score: 8129; 76.6% identity (88.9% similar) in 1625 aa overlap (1-1570:1-1614) 10 20 30 40 50 pF1KE0 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT :::: : :. :.:::::::::::: .::::::: ::::.::::::::::::..::.:: CCDS54 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ .: .::..:::::::....:.::. .: . ..::: ::: : ::::: :::::::: CCDS54 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP :: :::::. ::.:::. ..::. ::: . :: . : ::::..: ::::.::. CCDS54 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 120 130 140 150 160 170 180 190 200 210 220 pF1KE0 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQ---------- :::::::::.::::::::::::. ::.:::::: .::.:::. . CCDS54 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGP 180 190 200 210 220 230 230 240 250 260 270 pF1KE0 -----------QQQQQQQQQQQQPQQQPPQPQT----QQQQQPALVNYNRPSGPGPELSG . .. . . :.. :: :. . : :. : :: . .. CCDS54 GPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAA 240 250 260 270 280 290 280 290 300 310 320 pF1KE0 P-STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQLQQKQSRI : :::::: : : :::::::::. ::::. : :.. .:. :.::.:.. :.:::::: CCDS54 PTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRI 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE0 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNF .:::::.::::::::::::::::::::::::::::::::: :::::::.:::::::::: CCDS54 TPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNF 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE0 QRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKH :::::::::.::::::.::::::.:::::::::.:::::.:::::::::::::::::::: CCDS54 QRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH 420 430 440 450 460 470 450 460 470 480 490 500 pF1KE0 QEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMA :::::::::::::::::::::.::::::.:::::.:::::::::::.::::::::::::: CCDS54 QEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMA 480 490 500 510 520 530 510 520 530 540 550 560 pF1KE0 EDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE :::::::::::::::.:::::::::::::::::.:: .:: ::.::::::....:: : CCDS54 EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKK--AE 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE0 NAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYE :::: :.::::::.::.:::::::::: :.:.::.: : .::::.::.:::::::::: CCDS54 NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYE 600 610 620 630 640 650 630 640 650 660 670 680 pF1KE0 VAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKDAKQIIETA :::::::::: :. :::.::::. . :.: . ::.:..::: ::..:::.: CCDS54 VAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENA 660 670 680 690 700 710 690 700 710 720 730 740 pF1KE0 KQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYN ::::::::.. : ::: ::::.::::..:::.:::::..::.::.::..::::.::::: CCDS54 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 720 730 740 750 760 770 750 760 770 780 790 800 pF1KE0 NNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVV :::::::::::::::::::::::::::::::.:::.::::::::::::.::::::::::: CCDS54 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 780 790 800 810 820 830 810 820 830 840 850 860 pF1KE0 KISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH :.::::.:: ::..:::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 840 850 860 870 880 890 870 880 890 900 910 920 pF1KE0 CKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS54 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 900 910 920 930 940 950 930 940 950 960 970 980 pF1KE0 GERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRH ::.::::::::::::::::::::::::::::::::.::::::::::::::::::..:::: CCDS54 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 960 970 980 990 1000 1010 990 1000 1010 1020 1030 1040 pF1KE0 MQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVI :::::.:::::::::::::::.:::::::::::::::::::::::::::.::::...:.. CCDS54 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1020 1030 1040 1050 1060 1070 1050 1060 1070 1080 1090 1100 pF1KE0 NGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTT .: .:::::::::::::::::::::::.:::::::::::::::::::.:.: :::::::: CCDS54 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1080 1090 1100 1110 1120 1130 1110 1120 1130 1140 1150 1160 pF1KE0 KSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA :.:::. ::: ::::::.::::::::::::::::::.::::.:::::::::::::::::: CCDS54 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1140 1150 1160 1170 1180 1190 1170 1180 1190 1200 1210 1220 pF1KE0 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1200 1210 1220 1230 1240 1250 1230 1240 1250 1260 1270 1280 pF1KE0 LEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDEL :::::..:::::::::::.::::::.:::::::::::.:::::.:::::::::::::::: CCDS54 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1260 1270 1280 1290 1300 1310 1290 1300 1310 1320 1330 1340 pF1KE0 PSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEE ::::::::::::::::::::::.::::::.:..:::::.:::::::.:::.:.:::.::: CCDS54 PSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEE 1320 1330 1340 1350 1360 1370 1350 1360 1370 1380 pF1KE0 VRLKKRKRRRNVDKD-----PA-------KEDVEKAKKRRGRPPAEKLSPNPPKLTKQMN :: :: .:.:. :.: :. :.: : .:.::::::::::::::.:::.:. CCDS54 VRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMK 1380 1390 1400 1410 1420 1430 1390 1400 1410 1420 1430 1440 pF1KE0 AIIDTVINYKDSS-GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLG :.:.::.::::: :::::::::::::::::::::::::::::::::::::::::::::. CCDS54 KIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLN 1440 1450 1460 1470 1480 1490 1450 1460 1470 1480 1490 1500 pF1KE0 DLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDE ::::::::::.:::::::::: :::::::::::: :.:::: ::..:: : .::::: .: CCDS54 DLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEE 1500 1510 1520 1530 1540 1550 1510 1520 1530 1540 1550 1560 pF1KE0 EESESEAKSVKVKIKLNKKDDKGRDKGKG-KKRPNRG-KAKPVVSDFDSDEEQDEREQSE : ::::..::::::::..:. :..:. :: ..::.:: .::::::: ::.:::.: ... CCDS54 EGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGS 1560 1570 1580 1590 1600 1570 pF1KE0 GSGTDDE :: : CCDS54 GSEED 1610 >>CCDS45973.1 SMARCA4 gene_id:6597|Hs108|chr19 (1616 aa) initn: 6957 init1: 3931 opt: 6320 Z-score: 2471.6 bits: 470.2 E(32554): 2.4e-131 Smith-Waterman score: 8125; 76.5% identity (88.8% similar) in 1627 aa overlap (1-1570:1-1616) 10 20 30 40 50 pF1KE0 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT :::: : :. :.:::::::::::: .::::::: ::::.::::::::::::..::.:: CCDS45 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ .: .::..:::::::....:.::. .: . ..::: ::: : ::::: :::::::: CCDS45 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP :: :::::. ::.:::. ..::. ::: . :: . : ::::..: ::::.::. CCDS45 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 120 130 140 150 160 170 180 190 200 210 220 pF1KE0 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQ---------- :::::::::.::::::::::::. ::.:::::: .::.:::. . CCDS45 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGP 180 190 200 210 220 230 230 240 250 260 270 pF1KE0 -----------QQQQQQQQQQQQPQQQPPQPQT----QQQQQPALVNYNRPSGPGPELSG . .. . . :.. :: :. . : :. : :: . .. CCDS45 GPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAA 240 250 260 270 280 290 280 290 300 310 320 pF1KE0 P-STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQLQQKQSRI : :::::: : : :::::::::. ::::. : :.. .:. :.::.:.. :.:::::: CCDS45 PTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRI 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE0 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNF .:::::.::::::::::::::::::::::::::::::::: :::::::.:::::::::: CCDS45 TPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNF 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE0 QRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKH :::::::::.::::::.::::::.:::::::::.:::::.:::::::::::::::::::: CCDS45 QRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH 420 430 440 450 460 470 450 460 470 480 490 500 pF1KE0 QEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMA :::::::::::::::::::::.::::::.:::::.:::::::::::.::::::::::::: CCDS45 QEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMA 480 490 500 510 520 530 510 520 530 540 550 560 pF1KE0 EDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE :::::::::::::::.:::::::::::::::::.:: .:: ::.::::::....:: : CCDS45 EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKK--AE 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE0 NAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYE :::: :.::::::.::.:::::::::: :.:.::.: : .::::.::.:::::::::: CCDS45 NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYE 600 610 620 630 640 650 630 640 650 660 670 680 pF1KE0 VAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKDAKQIIETA :::::::::: :. :::.::::. . :.: . ::.:..::: ::..:::.: CCDS45 VAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENA 660 670 680 690 700 710 690 700 710 720 730 740 pF1KE0 KQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYN ::::::::.. : ::: ::::.::::..:::.:::::..::.::.::..::::.::::: CCDS45 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 720 730 740 750 760 770 750 760 770 780 790 800 pF1KE0 NNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVV :::::::::::::::::::::::::::::::.:::.::::::::::::.::::::::::: CCDS45 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 780 790 800 810 820 830 810 820 830 840 850 860 pF1KE0 KISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH :.::::.:: ::..:::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 840 850 860 870 880 890 870 880 890 900 910 920 pF1KE0 CKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS45 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 900 910 920 930 940 950 930 940 950 960 970 980 pF1KE0 GERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRH ::.::::::::::::::::::::::::::::::::.::::::::::::::::::..:::: CCDS45 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 960 970 980 990 1000 1010 990 1000 1010 1020 1030 1040 pF1KE0 MQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVI :::::.:::::::::::::::.:::::::::::::::::::::::::::.::::...:.. CCDS45 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1020 1030 1040 1050 1060 1070 1050 1060 1070 1080 1090 1100 pF1KE0 NGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTT .: .:::::::::::::::::::::::.:::::::::::::::::::.:.: :::::::: CCDS45 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1080 1090 1100 1110 1120 1130 1110 1120 1130 1140 1150 1160 pF1KE0 KSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA :.:::. ::: ::::::.::::::::::::::::::.::::.:::::::::::::::::: CCDS45 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1140 1150 1160 1170 1180 1190 1170 1180 1190 1200 1210 1220 pF1KE0 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1200 1210 1220 1230 1240 1250 1230 1240 1250 1260 1270 1280 pF1KE0 LEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDEL :::::..:::::::::::.::::::.:::::::::::.:::::.:::::::::::::::: CCDS45 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1260 1270 1280 1290 1300 1310 1290 1300 1310 1320 1330 pF1KE0 PSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLR---AIEDGNLEEM ::::::::::::::::::::::.::::::.:..:::::.:::::::. :::.:.:::. CCDS45 PSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEI 1320 1330 1340 1350 1360 1370 1340 1350 1360 1370 1380 pF1KE0 EEEVRLKKRKRRRNVDKD-----PA-------KEDVEKAKKRRGRPPAEKLSPNPPKLTK ::::: :: .:.:. :.: :. :.: : .:.::::::::::::::.::: CCDS45 EEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK 1380 1390 1400 1410 1420 1430 1390 1400 1410 1420 1430 1440 pF1KE0 QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS .:. :.:.::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS 1440 1450 1460 1470 1480 1490 1450 1460 1470 1480 1490 1500 pF1KE0 LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEE :.::::::::::.:::::::::: :::::::::::: :.:::: ::..:: : .::::: CCDS45 LNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEG 1500 1510 1520 1530 1540 1550 1510 1520 1530 1540 1550 1560 pF1KE0 DEEESESEAKSVKVKIKLNKKDDKGRDKGKG-KKRPNRG-KAKPVVSDFDSDEEQDEREQ .:: ::::..::::::::..:. :..:. :: ..::.:: .::::::: ::.:::.: .. CCDS45 EEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRS 1560 1570 1580 1590 1600 1570 pF1KE0 SEGSGTDDE . :: : CCDS45 GSGSEED 1610 >>CCDS45972.1 SMARCA4 gene_id:6597|Hs108|chr19 (1617 aa) initn: 6989 init1: 3931 opt: 6313 Z-score: 2468.8 bits: 469.7 E(32554): 3.4e-131 Smith-Waterman score: 8113; 76.4% identity (88.8% similar) in 1628 aa overlap (1-1570:1-1617) 10 20 30 40 50 pF1KE0 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT :::: : :. :.:::::::::::: .::::::: ::::.::::::::::::..::.:: CCDS45 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ .: .::..:::::::....:.::. .: . ..::: ::: : ::::: :::::::: CCDS45 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP :: :::::. ::.:::. ..::. ::: . :: . : ::::..: ::::.::. CCDS45 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 120 130 140 150 160 170 180 190 200 210 220 pF1KE0 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQ---------- :::::::::.::::::::::::. ::.:::::: .::.:::. . CCDS45 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGP 180 190 200 210 220 230 230 240 250 260 270 pF1KE0 -----------QQQQQQQQQQQQPQQQPPQPQT----QQQQQPALVNYNRPSGPGPELSG . .. . . :.. :: :. . : :. : :: . .. CCDS45 GPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAA 240 250 260 270 280 290 280 290 300 310 320 pF1KE0 P-STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQLQQKQSRI : :::::: : : :::::::::. ::::. : :.. .:. :.::.:.. :.:::::: CCDS45 PTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRI 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE0 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNF .:::::.::::::::::::::::::::::::::::::::: :::::::.:::::::::: CCDS45 TPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNF 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE0 QRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKH :::::::::.::::::.::::::.:::::::::.:::::.:::::::::::::::::::: CCDS45 QRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH 420 430 440 450 460 470 450 460 470 480 490 500 pF1KE0 QEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMA :::::::::::::::::::::.::::::.:::::.:::::::::::.::::::::::::: CCDS45 QEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMA 480 490 500 510 520 530 510 520 530 540 550 560 pF1KE0 EDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE :::::::::::::::.:::::::::::::::::.:: .:: ::.::::::....:: : CCDS45 EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKK--AE 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE0 NAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYE :::: :.::::::.::.:::::::::: :.:.::.: : .::::.::.:::::::::: CCDS45 NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYE 600 610 620 630 640 650 630 640 650 660 670 680 pF1KE0 VAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKDAKQIIETA :::::::::: :. :::.::::. . :.: . ::.:..::: ::..:::.: CCDS45 VAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENA 660 670 680 690 700 710 690 700 710 720 730 740 pF1KE0 KQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYN ::::::::.. : ::: ::::.::::..:::.:::::..::.::.::..::::.::::: CCDS45 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 720 730 740 750 760 770 750 760 770 780 790 800 pF1KE0 NNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVV :::::::::::::::::::::::::::::::.:::.::::::::::::.::::::::::: CCDS45 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 780 790 800 810 820 830 810 820 830 840 850 860 pF1KE0 KISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH :.::::.:: ::..:::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 840 850 860 870 880 890 870 880 890 900 910 920 pF1KE0 CKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS45 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 900 910 920 930 940 950 930 940 950 960 970 980 pF1KE0 GERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRH ::.::::::::::::::::::::::::::::::::.::::::::::::::::::..:::: CCDS45 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 960 970 980 990 1000 1010 990 1000 1010 1020 1030 1040 pF1KE0 MQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVI :::::.:::::::::::::::.:::::::::::::::::::::::::::.::::...:.. CCDS45 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1020 1030 1040 1050 1060 1070 1050 1060 1070 1080 1090 1100 pF1KE0 NGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTT .: .:::::::::::::::::::::::.:::::::::::::::::::.:.: :::::::: CCDS45 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1080 1090 1100 1110 1120 1130 1110 1120 1130 1140 1150 1160 pF1KE0 KSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA :.:::. ::: ::::::.::::::::::::::::::.::::.:::::::::::::::::: CCDS45 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1140 1150 1160 1170 1180 1190 1170 1180 1190 1200 1210 1220 pF1KE0 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1200 1210 1220 1230 1240 1250 1230 1240 1250 1260 1270 1280 pF1KE0 LEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDEL :::::..:::::::::::.::::::.:::::::::::.:::::.:::::::::::::::: CCDS45 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1260 1270 1280 1290 1300 1310 1290 1300 1310 1320 1330 pF1KE0 PSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLR---AIEDGNLEEM ::::::::::::::::::::::.::::::.:..:::::.:::::::. :::.:.:::. CCDS45 PSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEI 1320 1330 1340 1350 1360 1370 1340 1350 1360 1370 1380 pF1KE0 EEEVRLKKRKRRRNVDKD-----PA-------KEDVEKAKKRRGRPPAEKLSPNPPKLTK ::::: :: .:.:. :.: :. :.: : .:.::::::::::::::.::: CCDS45 EEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK 1380 1390 1400 1410 1420 1430 1390 1400 1410 1420 1430 1440 pF1KE0 QMNAIIDTVINYKDSS-GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR .:. :.:.::.::::: ::::::::::::::::::::::::::::::::::::::::::: CCDS45 KMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR 1440 1450 1460 1470 1480 1490 1450 1460 1470 1480 1490 1500 pF1KE0 SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEE ::.::::::::::.:::::::::: :::::::::::: :.:::: ::..:: : .::::: CCDS45 SLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEE 1500 1510 1520 1530 1540 1550 1510 1520 1530 1540 1550 1560 pF1KE0 EDEEESESEAKSVKVKIKLNKKDDKGRDKGKG-KKRPNRG-KAKPVVSDFDSDEEQDERE .:: ::::..::::::::..:. :..:. :: ..::.:: .::::::: ::.:::.: . CCDS45 GEEEGSESESRSVKVKIKLGRKE-KAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDR 1560 1570 1580 1590 1600 1570 pF1KE0 QSEGSGTDDE .. :: : CCDS45 SGSGSEED 1610 >>CCDS83338.1 SMARCA2 gene_id:6595|Hs108|chr9 (1514 aa) initn: 5900 init1: 5900 opt: 5900 Z-score: 2308.9 bits: 440.0 E(32554): 2.8e-122 Smith-Waterman score: 10004; 96.3% identity (96.3% similar) in 1572 aa overlap (1-1572:1-1514) 10 20 30 40 50 60 pF1KE0 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 GSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 QQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAAQPPAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 AVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 QTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE0 ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 ATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE0 TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 TNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE0 ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 ETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKI 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE0 LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLI 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE0 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 NGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE0 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE0 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP :::::::::::::::::::::::::: CCDS83 AKIRWKYMIVDEGHRMKNHHCKLTQV---------------------------------- 850 860 910 920 930 940 950 960 pF1KE0 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE :::::::::::::::::::::::::::::::::::: CCDS83 ------------------------DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 870 880 890 900 970 980 990 1000 1010 1020 pF1KE0 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY 910 920 930 940 950 960 1030 1040 1050 1060 1070 1080 pF1KE0 MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT 970 980 990 1000 1010 1020 1090 1100 1110 1120 1130 1140 pF1KE0 IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT 1030 1040 1050 1060 1070 1080 1150 1160 1170 1180 1190 1200 pF1KE0 VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ 1090 1100 1110 1120 1130 1140 1210 1220 1230 1240 1250 1260 pF1KE0 AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR 1150 1160 1170 1180 1190 1200 1270 1280 1290 1300 1310 1320 pF1KE0 RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 RREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL 1210 1220 1230 1240 1250 1260 1330 1340 1350 1360 1370 1380 pF1KE0 TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNP 1270 1280 1290 1300 1310 1320 1390 1400 1410 1420 1430 1440 pF1KE0 PKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 PKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN 1330 1340 1350 1360 1370 1380 1450 1460 1470 1480 1490 1500 pF1KE0 HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE 1390 1400 1410 1420 1430 1440 1510 1520 1530 1540 1550 1560 pF1KE0 EEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 EEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE 1450 1460 1470 1480 1490 1500 1570 pF1KE0 REQSEGSGTDDE :::::::::::: CCDS83 REQSEGSGTDDE 1510 >>CCDS12253.1 SMARCA4 gene_id:6597|Hs108|chr19 (1647 aa) initn: 6217 init1: 3300 opt: 5584 Z-score: 2185.7 bits: 417.3 E(32554): 2e-115 Smith-Waterman score: 8024; 75.3% identity (87.3% similar) in 1645 aa overlap (1-1557:1-1634) 10 20 30 40 50 pF1KE0 MSTPTDP-GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPT :::: : :. :.:::::::::::: .::::::: ::::.::::::::::::..::.:: CCDS12 MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGP--SPGSAHSMMGPSPGPPSAGHPIPT 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 MGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGTGMRPP-HPGMGPPQSPMDQHSQ .: .::..:::::::....:.::. .: . ..::: ::: : ::::: :::::::: CCDS12 QGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 GYMSPHPSPLGAPEHVSSPMSGGGPTP-PQMPPSQPGALIPG-DPQAMSQPNRGPSPFSP :: :::::. ::.:::. ..::. ::: . :: . : ::::..: ::::.::. CCDS12 GY----PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQ 120 130 140 150 160 170 180 190 200 210 220 pF1KE0 VQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQ---------- :::::::::.::::::::::::. ::.:::::: .::.:::. . CCDS12 NQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGP 180 190 200 210 220 230 230 240 250 260 270 pF1KE0 -----------QQQQQQQQQQQQPQQQPPQPQT----QQQQQPALVNYNRPSGPGPELSG . .. . . :.. :: :. . : :. : :: . .. CCDS12 GPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAA 240 250 260 270 280 290 280 290 300 310 320 pF1KE0 P-STPQKLPVPAPGGRPSPAPPAAAQPPAAA-VPGPSVPQPA-PGQPSPVLQLQQKQSRI : :::::: : : :::::::::. ::::. : :.. .:. :.::.:.. :.:::::: CCDS12 PTSTPQKLIPPQPTGRPSPAPPAV--PPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRI 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE0 SPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNF .:::::.::::::::::::::::::::::::::::::::: :::::::.:::::::::: CCDS12 TPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNF 360 370 380 390 400 410 390 400 410 420 430 440 pF1KE0 QRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKH :::::::::.::::::.::::::.:::::::::.:::::.:::::::::::::::::::: CCDS12 QRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH 420 430 440 450 460 470 450 460 470 480 490 500 pF1KE0 QEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMA :::::::::::::::::::::.::::::.:::::.:::::::::::.::::::::::::: CCDS12 QEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMA 480 490 500 510 520 530 510 520 530 540 550 560 pF1KE0 EDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE :::::::::::::::.:::::::::::::::::.:: .:: ::.::::::....:: : CCDS12 EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKA--E 540 550 560 570 580 590 570 580 590 600 610 620 pF1KE0 NAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYE :::: :.::::::.::.:::::::::: :.:.::.: : .::::.::.:::::::::: CCDS12 NAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYE 600 610 620 630 640 650 630 640 650 660 670 680 pF1KE0 VAPRSDSEESDSDYEEEDEEEESSRQET-------EEKILLDPNSEEVSEKDAKQIIETA :::::::::: :. :::.::::. . :.: . ::.:..::: ::..:::.: CCDS12 VAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENA 660 670 680 690 700 710 690 700 710 720 730 740 pF1KE0 KQDVDDEYSM-QYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYN ::::::::.. : ::: ::::.::::..:::.:::::..::.::.::..::::.::::: CCDS12 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 720 730 740 750 760 770 750 760 770 780 790 800 pF1KE0 NNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVV :::::::::::::::::::::::::::::::.:::.::::::::::::.::::::::::: CCDS12 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 780 790 800 810 820 830 810 820 830 840 850 860 pF1KE0 KISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH :.::::.:: ::..:::::::::::::::::::::::::::::::::::::::::::::: CCDS12 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 840 850 860 870 880 890 870 880 890 900 910 920 pF1KE0 CKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS12 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 900 910 920 930 940 950 930 940 950 960 970 980 pF1KE0 GERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRH ::.::::::::::::::::::::::::::::::::.::::::::::::::::::..:::: CCDS12 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 960 970 980 990 1000 1010 990 1000 1010 1020 1030 1040 pF1KE0 MQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVI :::::.:::::::::::::::.:::::::::::::::::::::::::::.::::...:.. CCDS12 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1020 1030 1040 1050 1060 1070 1050 1060 1070 1080 1090 1100 pF1KE0 NGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTT .: .:::::::::::::::::::::::.:::::::::::::::::::.:.: :::::::: CCDS12 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1080 1090 1100 1110 1120 1130 1110 1120 1130 1140 1150 1160 pF1KE0 KSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA :.:::. ::: ::::::.::::::::::::::::::.::::.:::::::::::::::::: CCDS12 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1140 1150 1160 1170 1180 1190 1170 1180 1190 1200 1210 1220 pF1KE0 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1200 1210 1220 1230 1240 1250 1230 1240 pF1KE0 LEHEEENE---------------------------------EEDEVPDDETLNQMIARRE :::::..: ::::::::::.::::::.: CCDS12 LEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHE 1260 1270 1280 1290 1300 1310 1250 1260 1270 1280 1290 1300 pF1KE0 EEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRG ::::::::::.:::::.::::::::::::::::::::::::::::::::::::::.:::: CCDS12 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRG 1320 1330 1340 1350 1360 1370 1310 1320 1330 1340 1350 pF1KE0 SRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKD-----PA----- ::.:..:::::.:::::::.:::.:.:::.::::: :: .:.:. :.: :. CCDS12 SRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRS 1380 1390 1400 1410 1420 1430 1360 1370 1380 1390 1400 1410 pF1KE0 --KEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSS-GRQLSEVFIQLPS :.: : .:.::::::::::::::.:::.:. :.:.::.::::: ::::::::::::: CCDS12 RDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPS 1440 1450 1460 1470 1480 1490 1420 1430 1440 1450 1460 1470 pF1KE0 RKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDS ::::::::::::::::::::::::::::::::.::::::::::.:::::::::: ::::: CCDS12 RKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS 1500 1510 1520 1530 1540 1550 1480 1490 1500 1510 1520 1530 pF1KE0 IVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKG ::::::: :.:::: ::..:: : .::::: .:: ::::..::::::::..:. :..:. CCDS12 IVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKE-KAQDRL 1560 1570 1580 1590 1600 1540 1550 1560 1570 pF1KE0 KG-KKRPNRG-KAKPVVSDFDSDEEQDEREQSEGSGTDDE :: ..::.:: .::::::: ::.:: CCDS12 KGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED 1610 1620 1630 1640 >>CCDS75807.1 SMARCA2 gene_id:6595|Hs108|chr9 (248 aa) initn: 1582 init1: 1582 opt: 1590 Z-score: 646.7 bits: 129.8 E(32554): 1.1e-29 Smith-Waterman score: 1590; 99.6% identity (99.6% similar) in 248 aa overlap (1325-1572:2-248) 1300 1310 1320 1330 1340 1350 pF1KE0 TCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDK :: ::::::::::::::::::::::::::: CCDS75 MWL-AIEDGNLEEMEEEVRLKKRKRRRNVDK 10 20 30 1360 1370 1380 1390 1400 1410 pF1KE0 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 DPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPS 40 50 60 70 80 90 1420 1430 1440 1450 1460 1470 pF1KE0 RKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDS 100 110 120 130 140 150 1480 1490 1500 1510 1520 1530 pF1KE0 IVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 IVLQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKG 160 170 180 190 200 210 1540 1550 1560 1570 pF1KE0 KGKKRPNRGKAKPVVSDFDSDEEQDEREQSEGSGTDDE :::::::::::::::::::::::::::::::::::::: CCDS75 KGKKRPNRGKAKPVVSDFDSDEEQDEREQSEGSGTDDE 220 230 240 >>CCDS83339.1 SMARCA2 gene_id:6595|Hs108|chr9 (276 aa) initn: 1585 init1: 1585 opt: 1585 Z-score: 644.1 bits: 129.5 E(32554): 1.5e-29 Smith-Waterman score: 1585; 99.6% identity (100.0% similar) in 246 aa overlap (1327-1572:31-276) 1300 1310 1320 1330 1340 1350 pF1KE0 EEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDP .::::::::::::::::::::::::::::: CCDS83 MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDP 10 20 30 40 50 60 1360 1370 1380 1390 1400 1410 pF1KE0 AKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 AKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRK 70 80 90 100 110 120 1420 1430 1440 1450 1460 1470 pF1KE0 ELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 ELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIV 130 140 150 160 170 180 1480 1490 1500 1510 1520 1530 pF1KE0 LQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 LQSVFKSARQKIAKEEESEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKG 190 200 210 220 230 240 1540 1550 1560 1570 pF1KE0 KKRPNRGKAKPVVSDFDSDEEQDEREQSEGSGTDDE :::::::::::::::::::::::::::::::::::: CCDS83 KKRPNRGKAKPVVSDFDSDEEQDEREQSEGSGTDDE 250 260 270 1572 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:15:53 2016 done: Sun Nov 6 11:15:55 2016 Total Scan time: 7.370 Total Display time: 0.950 Function used was FASTA [36.3.4 Apr, 2011]