(Linear) (Six-base) MAPSORT of: KIEE0797.seq Check: 6890 from: 1 to: 4716 KIEE0797.orf With 182 enzymes: SgfI * September 6, 2010 13:28 .. AccI GT'mk_AC Cuts at: 0 237 2811 4716 Size: 237 2574 1905 Fragments arranged by size: 2574 1905 237 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1033 1544 2869 3326 3346 3388 3887 4716 Size: 1033 511 1325 457 20 42 499 829 Fragments arranged by size: 1325 1033 829 511 499 457 42 20 AflII C'TTAA_G Cuts at: 0 4027 4716 Size: 4027 689 AflIII A'CryG_T Cuts at: 0 2906 4716 Size: 2906 1810 AhdI GACnn_n'nnGTC Cuts at: 0 3618 4716 Size: 3618 1098 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 310 2096 2534 4478 4716 Size: 310 1786 438 1944 238 Fragments arranged by size: 1944 1786 438 310 238 AlwNI CAG_nnn'CTG Cuts at: 0 19 831 1266 2193 3440 3459 4716 Size: 19 812 435 927 1247 19 1257 Fragments arranged by size: 1257 1247 927 812 435 19 19 ApaI G_GGCC'C Cuts at: 0 322 465 914 2679 4716 Size: 322 143 449 1765 2037 Fragments arranged by size: 2037 1765 449 322 143 ApoI r'AATT_y Cuts at: 0 1022 2371 2464 3331 3745 4716 Size: 1022 1349 93 867 414 971 Fragments arranged by size: 1349 1022 971 867 414 93 AseI AT'TA_AT Cuts at: 0 2159 4270 4716 Size: 2159 2111 446 Fragments arranged by size: 2159 2111 446 AvaI C'yCGr_G Cuts at: 0 578 792 813 907 933 4716 Size: 578 214 21 94 26 3783 Fragments arranged by size: 3783 578 214 94 26 21 AvrII C'CTAG_G Cuts at: 0 3096 4335 4716 Size: 3096 1239 381 Fragments arranged by size: 3096 1239 381 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 3407 3440 4716 Size: 3407 33 1276 Fragments arranged by size: 3407 1276 33 BamHI G'GATC_C Cuts at: 0 274 1986 2627 2954 3346 4399 4716 Size: 274 1712 641 327 392 1053 317 Fragments arranged by size: 1712 1053 641 392 327 317 274 BanI G'GyrC_C Cuts at: 0 837 3292 4716 Size: 837 2455 1424 Fragments arranged by size: 2455 1424 837 BanII G_rGCy'C Cuts at: 0 322 390 465 552 914 1748 2092 2388 Size: 322 68 75 87 362 834 344 296 Cuts at: 2388 2679 3480 4716 Size: 291 801 1236 Fragments arranged by size: 1236 834 801 362 344 322 296 291 87 75 68 BbsI GAAGACnn'nnnn_ Cuts at: 0 266 3614 3995 4215 4421 4716 Size: 266 3348 381 220 206 295 Fragments arranged by size: 3348 381 295 266 220 206 BbvCI CC'TCA_GC Cuts at: 0 1697 4716 Size: 1697 3019 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 526 560 4716 Size: 526 34 4156 Fragments arranged by size: 4156 526 34 BciVI GTATCCnnnnn_n' Cuts at: 0 1064 4716 Size: 1064 3652 BclI T'GATC_A Cuts at: 0 1554 2798 2894 4716 Size: 1554 1244 96 1822 Fragments arranged by size: 1822 1554 1244 96 BfrBI ATG'CAT Cuts at: 0 210 219 4716 Size: 210 9 4497 Fragments arranged by size: 4497 210 9 BglI GCCn_nnn'nGGC Cuts at: 0 3290 4716 Size: 3290 1426 BglII A'GATC_T Cuts at: 0 1894 4406 4716 Size: 1894 2512 310 Fragments arranged by size: 2512 1894 310 BlpI GC'TnA_GC Cuts at: 0 805 2021 2042 3370 4716 Size: 805 1216 21 1328 1346 Fragments arranged by size: 1346 1328 1216 805 21 Bme1580I G_kGCm'C Cuts at: 0 289 322 465 842 908 914 2679 4452 Size: 289 33 143 377 66 6 1765 1773 Cuts at: 4452 4716 Size: 264 Fragments arranged by size: 1773 1765 377 289 264 143 66 33 6 BmgBI CAC'GTC Cuts at: 0 399 2052 3939 4716 Size: 399 1653 1887 777 Fragments arranged by size: 1887 1653 777 399 BmrI ACTGGGnnnn_n' Cuts at: 0 2088 2648 3345 4716 Size: 2088 560 697 1371 Fragments arranged by size: 2088 1371 697 560 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 417 1292 3858 4716 Size: 417 875 2566 858 Fragments arranged by size: 2566 875 858 417 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 387 437 940 1237 1315 2170 4366 4414 Size: 387 50 503 297 78 855 2196 48 Cuts at: 4414 4716 Size: 302 Fragments arranged by size: 2196 855 503 387 302 297 78 50 48 Bpu10I CC'TnA_GC Cuts at: 0 1697 3976 4716 Size: 1697 2279 740 Fragments arranged by size: 2279 1697 740 BsaBI GATnn'nnATC Cuts at: 0 4061 4716 Size: 4061 655 BsaHI Gr'CG_yC Cuts at: 0 1853 2808 3953 4716 Size: 1853 955 1145 763 Fragments arranged by size: 1853 1145 955 763 BsaWI w'CCGG_w Cuts at: 0 1734 3699 4328 4716 Size: 1734 1965 629 388 Fragments arranged by size: 1965 1734 629 388 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 2128 2158 3955 3985 4716 Size: 2128 30 1797 30 731 Fragments arranged by size: 2128 1797 731 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 434 1546 1689 1692 1695 1714 2671 2683 Size: 434 1112 143 3 3 19 957 12 Cuts at: 2683 3685 3841 3910 3913 4516 4681 4716 Size: 1002 156 69 3 603 165 35 Fragments arranged by size: 1112 1002 957 603 434 165 156 143 69 35 19 12 3 3 3 BseYI C'CCAG_C Cuts at: 0 2447 2867 4716 Size: 2447 420 1849 Fragments arranged by size: 2447 1849 420 BsiEI CG_ry'CG Cuts at: 0 855 899 3560 4716 Size: 855 44 2661 1156 Fragments arranged by size: 2661 1156 855 44 BsiHKAI G_wGCw'C Cuts at: 0 398 552 820 1640 2306 3376 3480 4716 Size: 398 154 268 820 666 1070 104 1236 Fragments arranged by size: 1236 1070 820 666 398 268 154 104 BsmI GAATG_Cn' Cuts at: 0 1511 1710 3643 4716 Size: 1511 199 1933 1073 Fragments arranged by size: 1933 1511 1073 199 BsmBI CGTCTCn'nnnn_ Cuts at: 0 405 1213 4716 Size: 405 808 3503 Fragments arranged by size: 3503 808 405 Bsp1286I G_dGCh'C Cuts at: 0 289 322 390 398 465 552 820 842 Size: 289 33 68 8 67 87 268 22 Cuts at: 842 908 914 1640 1748 2092 2306 2388 2679 Size: 66 6 726 108 344 214 82 291 Cuts at: 2679 3376 3480 4452 4716 Size: 697 104 972 264 Fragments arranged by size: 972 726 697 344 291 289 268 264 214 108 104 87 82 68 67 66 33 22 8 6 BspHI T'CATG_A Cuts at: 0 3233 4716 Size: 3233 1483 BsrBI CCG'CTC Cuts at: 0 809 1035 1488 3636 4716 Size: 809 226 453 2148 1080 Fragments arranged by size: 2148 1080 809 453 226 BsrDI GCAATG_nn' Cuts at: 0 2276 4500 4716 Size: 2276 2224 216 Fragments arranged by size: 2276 2224 216 BsrFI r'CCGG_y Cuts at: 0 759 834 854 927 1804 3776 4716 Size: 759 75 20 73 877 1972 940 Fragments arranged by size: 1972 940 877 759 75 73 20 BssSI C'ACGA_G Cuts at: 0 3631 4716 Size: 3631 1085 BstAPI GCAn_nnn'nTGC Cuts at: 0 216 831 4716 Size: 216 615 3885 Fragments arranged by size: 3885 615 216 BstXI CCAn_nnnn'nTGG Cuts at: 0 1437 4716 Size: 1437 3279 BstYI r'GATC_y Cuts at: 0 274 1415 1894 1986 2627 2954 3346 3456 Size: 274 1141 479 92 641 327 392 110 Cuts at: 3456 3548 4062 4399 4406 4716 Size: 92 514 337 7 310 Fragments arranged by size: 1141 641 514 479 392 337 327 310 274 110 92 92 7 BstZ17I GTA'TAC Cuts at: 0 238 4716 Size: 238 4478 Bsu36I CC'TnA_GG Cuts at: 0 3144 4716 Size: 3144 1572 BtgI C'CryG_G Cuts at: 0 893 1016 1130 2108 4716 Size: 893 123 114 978 2608 Fragments arranged by size: 2608 978 893 123 114 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 40 4676 4716 Size: 40 4636 40 Fragments arranged by size: 4636 40 40 BtsI GCAGTG_nn' Cuts at: 0 908 1442 2577 3976 4716 Size: 908 534 1135 1399 740 Fragments arranged by size: 1399 1135 908 740 534 ClaI AT'CG_AT Cuts at: 0 230 4172 4716 Size: 230 3942 544 Fragments arranged by size: 3942 544 230 DraIII CAC_nnn'GTG Cuts at: 0 2613 3204 4716 Size: 2613 591 1512 Fragments arranged by size: 2613 1512 591 DrdI GACnn_nn'nnGTC Cuts at: 0 180 1780 4423 4716 Size: 180 1600 2643 293 Fragments arranged by size: 2643 1600 293 180 EaeI y'GGCC_r Cuts at: 0 852 896 1406 3557 4716 Size: 852 44 510 2151 1159 Fragments arranged by size: 2151 1159 852 510 44 EagI C'GGCC_G Cuts at: 0 852 896 3557 4716 Size: 852 44 2661 1159 Fragments arranged by size: 2661 1159 852 44 EarI CTCTTCn'nnn_ Cuts at: 0 1666 1901 1925 1940 1964 3887 4007 4090 Size: 1666 235 24 15 24 1923 120 83 Cuts at: 4090 4095 4469 4493 4502 4517 4716 Size: 5 374 24 9 15 199 Fragments arranged by size: 1923 1666 374 235 199 120 83 24 24 24 15 15 9 5 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 3795 4716 Size: 3795 921 EcoICRI GAG'CTC Cuts at: 0 550 3478 4716 Size: 550 2928 1238 Fragments arranged by size: 2928 1238 550 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 387 437 940 1033 1237 1315 1544 2170 Size: 387 50 503 93 204 78 229 626 Cuts at: 2170 2869 3326 3346 3388 3887 4366 4414 4716 Size: 699 457 20 42 499 479 48 302 Fragments arranged by size: 699 626 503 499 479 457 387 302 229 204 93 78 50 48 42 20 EcoNI CCTnn'n_nnAGG Cuts at: 0 89 308 4348 4716 Size: 89 219 4040 368 Fragments arranged by size: 4040 368 219 89 EcoO109I rG'GnC_Cy Cuts at: 0 40 52 319 461 462 508 911 2165 Size: 40 12 267 142 1 46 403 1254 Cuts at: 2165 2190 2642 2676 3920 4716 Size: 25 452 34 1244 796 Fragments arranged by size: 1254 1244 796 452 403 267 142 46 40 34 25 12 1 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 4042 4716 Size: 4042 674 FseI GG_CCGG'CC Cuts at: 0 858 4716 Size: 858 3858 FspI TGC'GCA Cuts at: 0 1201 4716 Size: 1201 3515 HaeII r_GCGC'y Cuts at: 0 1260 3933 4716 Size: 1260 2673 783 Fragments arranged by size: 2673 1260 783 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 2128 2160 2916 2948 3213 3245 3604 3636 Size: 2128 32 756 32 265 32 359 32 Cuts at: 3636 4111 4143 4302 4334 4391 4423 4516 4528 Size: 475 32 159 32 57 32 93 12 Cuts at: 4528 4548 4560 4716 Size: 20 12 156 Fragments arranged by size: 2128 756 475 359 265 159 156 93 57 32 32 32 32 32 32 32 20 12 12 HincII GTy'rAC Cuts at: 0 771 4716 Size: 771 3945 HpaI GTT'AAC Cuts at: 0 771 4716 Size: 771 3945 MslI CAynn'nnrTG Cuts at: 0 292 2545 3025 4716 Size: 292 2253 480 1691 Fragments arranged by size: 2253 1691 480 292 MspA1I CmG'CkG Cuts at: 0 534 895 960 1173 1848 2649 3412 4117 Size: 534 361 65 213 675 801 763 705 Cuts at: 4117 4716 Size: 599 Fragments arranged by size: 801 763 705 675 599 534 361 213 65 NaeI GCC'GGC Cuts at: 0 761 856 929 4716 Size: 761 95 73 3787 Fragments arranged by size: 3787 761 95 73 NdeI CA'TA_TG Cuts at: 0 2367 2939 4716 Size: 2367 572 1777 Fragments arranged by size: 2367 1777 572 NgoMIV G'CCGG_C Cuts at: 0 759 854 927 4716 Size: 759 95 73 3789 Fragments arranged by size: 3789 759 95 73 NotI GC'GGCC_GC Cuts at: 0 896 3557 4716 Size: 896 2661 1159 Fragments arranged by size: 2661 1159 896 NsiI A_TGCA'T Cuts at: 0 212 221 4716 Size: 212 9 4495 Fragments arranged by size: 4495 212 9 NspI r_CATG'y Cuts at: 0 210 1200 1375 1453 2073 2910 3609 4716 Size: 210 990 175 78 620 837 699 1107 Fragments arranged by size: 1107 990 837 699 620 210 175 78 PasI CC'CwG_GG Cuts at: 0 37 67 1728 4716 Size: 37 30 1661 2988 Fragments arranged by size: 2988 1661 37 30 PciI A'CATG_T Cuts at: 0 2906 4716 Size: 2906 1810 PflMI CCAn_nnn'nTGG Cuts at: 0 79 142 2193 4716 Size: 79 63 2051 2523 Fragments arranged by size: 2523 2051 79 63 PfoI T'CCnGG_A Cuts at: 0 90 141 1982 3844 4716 Size: 90 51 1841 1862 872 Fragments arranged by size: 1862 1841 872 90 51 PpuMI rG'GwC_Cy Cuts at: 0 508 2165 2642 3920 4716 Size: 508 1657 477 1278 796 Fragments arranged by size: 1657 1278 796 508 477 PshAI GACnn'nnGTC Cuts at: 0 2593 4716 Size: 2593 2123 PsiI TTA'TAA Cuts at: 0 566 2500 4716 Size: 566 1934 2216 Fragments arranged by size: 2216 1934 566 PspOMI G'GGCC_C Cuts at: 0 318 461 910 2675 4716 Size: 318 143 449 1765 2041 Fragments arranged by size: 2041 1765 449 318 143 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 3259 3291 4716 Size: 3259 32 1425 Fragments arranged by size: 3259 1425 32 PstI C_TGCA'G Cuts at: 0 608 965 2654 2719 2921 3464 3653 4716 Size: 608 357 1689 65 202 543 189 1063 Fragments arranged by size: 1689 1063 608 543 357 202 189 65 PvuII CAG'CTG Cuts at: 0 534 960 1173 1848 3412 4716 Size: 534 426 213 675 1564 1304 Fragments arranged by size: 1564 1304 675 534 426 213 SacI G_AGCT'C Cuts at: 0 552 3480 4716 Size: 552 2928 1236 Fragments arranged by size: 2928 1236 552 SacII CC_GC'GG Cuts at: 0 896 4716 Size: 896 3820 SanDI GG'GwC_CC Cuts at: 0 2165 2642 3920 4716 Size: 2165 477 1278 796 Fragments arranged by size: 2165 1278 796 477 SbfI CC_TGCA'GG Cuts at: 0 3653 4716 Size: 3653 1063 SfcI C'TryA_G Cuts at: 0 604 961 2650 2715 2917 3460 3649 3945 Size: 604 357 1689 65 202 543 189 296 Cuts at: 3945 4640 4716 Size: 695 76 Fragments arranged by size: 1689 695 604 543 357 296 202 189 76 65 SmaI CCC'GGG Cuts at: 0 794 909 935 4716 Size: 794 115 26 3781 Fragments arranged by size: 3781 794 115 26 SmlI C'TyrA_G Cuts at: 0 4027 4716 Size: 4027 689 SphI G_CATG'C Cuts at: 0 210 1200 1453 2073 4716 Size: 210 990 253 620 2643 Fragments arranged by size: 2643 990 620 253 210 SrfI GCCC'GGGC Cuts at: 0 909 4716 Size: 909 3807 SspI AAT'ATT Cuts at: 0 3908 4716 Size: 3908 808 StuI AGG'CCT Cuts at: 0 1007 4716 Size: 1007 3709 StyI C'CwwG_G Cuts at: 0 351 2948 3096 4335 4716 Size: 351 2597 148 1239 381 Fragments arranged by size: 2597 1239 381 351 148 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 50 323 386 1300 1388 1612 1848 3068 Size: 50 273 63 914 88 224 236 1220 Cuts at: 3068 3488 4716 Size: 420 1228 Fragments arranged by size: 1228 1220 914 420 273 236 224 88 63 50 TatI w'GTAC_w Cuts at: 0 2075 4716 Size: 2075 2641 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 2985 3017 3955 3987 4716 Size: 2985 32 938 32 729 Fragments arranged by size: 2985 938 729 32 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1128 2455 4716 Size: 1128 1327 2261 Fragments arranged by size: 2261 1327 1128 XmaI C'CCGG_G Cuts at: 0 792 907 933 4716 Size: 792 115 26 3783 Fragments arranged by size: 3783 792 115 26 XmnI GAAnn'nnTTC Cuts at: 0 3331 4310 4716 Size: 3331 979 406 Fragments arranged by size: 3331 979 406 Enzymes that do cut: AccI AcuI AflII AflIII AhdI AlfI AlwNI ApaI ApoI AseI AvaI AvrII BaeI BamHI BanI BanII BbsI BbvCI BcgI BciVI BclI BfrBI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspHI BsrBI BsrDI BsrFI BssSI BstAPI BstXI BstYI BstZ17I Bsu36I BtgI BtgZI BtsI ClaI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I FalI FseI FspI HaeII Hin4I HincII HpaI MslI MspA1I NaeI NdeI NgoMIV NotI NsiI NspI PasI PciI PflMI PfoI PpuMI PshAI PsiI PspOMI PsrI PstI PvuII SacI SacII SanDI SbfI SfcI SmaI SmlI SphI SrfI SspI StuI StyI TaqII TatI TstI XcmI XmaI XmnI Enzymes that do not cut: AarI AatII Acc65I AclI AfeI AgeI AleI AloI ApaLI AscI AsiSI BbeI BmtI BpuEI BsaI BsaAI BsgI BsiWI BspEI BspMI BsrGI BssHII BstBI BstEII CspCI DraI EcoRI EcoRV FspAI HindIII KasI KpnI MfeI MluI MmeI MscI NarI NcoI NheI NruI PacI PmeI PmlI PpiI PspXI PvuI RsrII SalI SapI ScaI SexAI SfiI SfoI SgfI SgrAI SnaBI SpeI SwaI Tth111I XbaI XhoI ZraI