FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1612, 119 aa 1>>>pF1KE1612 119 - 119 aa - 119 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8360+/-0.00059; mu= 13.0303+/- 0.035 mean_var=58.7234+/-11.410, 0's: 0 Z-trim(111.9): 47 B-trim: 57 in 1/50 Lambda= 0.167367 statistics sampled from 12698 (12745) to 12698 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.773), E-opt: 0.2 (0.392), width: 16 Scan time: 1.470 The best scores are: opt bits E(32554) CCDS34670.1 CCL24 gene_id:6369|Hs108|chr7 ( 119) 813 203.6 2.4e-53 CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17 ( 99) 231 63.0 4.2e-11 >>CCDS34670.1 CCL24 gene_id:6369|Hs108|chr7 (119 aa) initn: 813 init1: 813 opt: 813 Z-score: 1071.1 bits: 203.6 E(32554): 2.4e-53 Smith-Waterman score: 813; 100.0% identity (100.0% similar) in 119 aa overlap (1-119:1-119) 10 20 30 40 50 60 pF1KE1 MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC 70 80 90 100 110 >>CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17 (99 aa) initn: 241 init1: 222 opt: 231 Z-score: 312.8 bits: 63.0 E(32554): 4.2e-11 Smith-Waterman score: 231; 36.0% identity (65.0% similar) in 100 aa overlap (5-99:1-98) 10 20 30 40 50 pF1KE1 MAGLMTIVTSLLFLGVCAHHIIPTG-----SVVIPSPCCMFFVSKRIPENRVVSYQLSSR : ..:: : . : . : : .. . ::. :..:.::..:. ::. .. CCDS11 MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTS 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 STCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGN : : . .::: :: ...:.:: :.::: .::.:: .: .:. CCDS11 SHCPREAVIFKTKLDKEICADPTQKWVQDFMKHLD--KKTQTPKL 60 70 80 90 pF1KE1 QTTC 119 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:17:58 2016 done: Sun Nov 6 11:17:58 2016 Total Scan time: 1.470 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]