FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4009, 828 aa 1>>>pF1KE4009 828 - 828 aa - 828 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4015+/-0.000844; mu= 15.3790+/- 0.051 mean_var=84.4679+/-17.101, 0's: 0 Z-trim(108.3): 11 B-trim: 0 in 0/52 Lambda= 0.139550 statistics sampled from 10137 (10139) to 10137 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.311), width: 16 Scan time: 3.990 The best scores are: opt bits E(32554) CCDS34507.1 BEND3 gene_id:57673|Hs108|chr6 ( 828) 5593 1136.2 0 >>CCDS34507.1 BEND3 gene_id:57673|Hs108|chr6 (828 aa) initn: 5593 init1: 5593 opt: 5593 Z-score: 6081.1 bits: 1136.2 E(32554): 0 Smith-Waterman score: 5593; 100.0% identity (100.0% similar) in 828 aa overlap (1-828:1-828) 10 20 30 40 50 60 pF1KE4 MNSTEFTEDVEEVLKSITVKVETEAEDAALDCSVNSRTSEKHSVDSVLTALQDSSKRKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MNSTEFTEDVEEVLKSITVKVETEAEDAALDCSVNSRTSEKHSVDSVLTALQDSSKRKQL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VSDGLLDSVPGVKRRRLIPEALLAGMRNRENSSPCQGNGEQAGRGRSLGNVWPGEEEPCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VSDGLLDSVPGVKRRRLIPEALLAGMRNRENSSPCQGNGEQAGRGRSLGNVWPGEEEPCN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DATTPSYKKPLYGISHKIMEKKNPPSGDLLNVYELFEKANASNSPSSLRLLNEPQKRDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DATTPSYKKPLYGISHKIMEKKNPPSGDLLNVYELFEKANASNSPSSLRLLNEPQKRDCG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 STGAGTDNDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVSRIKKQVSPTEMVAKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 STGAGTDNDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVSRIKKQVSPTEMVAKF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 QPPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QPPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 SLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREMEDSQPSGQVASFFEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREMEDSQPSGQVASFFEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 EQVDPGHFLDNKDQEEALSLDRSSTIASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EQVDPGHFLDNKDQEEALSLDRSSTIASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 ELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDEL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 EGLGLDAGSEGDPPRDDCYDSSSLPDDISVVKVEDSFEGERPGRRSKKIWLVPIDFDKLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EGLGLDAGSEGDPPRDDCYDSSSLPDDISVVKVEDSFEGERPGRRSKKIWLVPIDFDKLE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 IPQPDFEVPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IPQPDFEVPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGS 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 LGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 HVPGPECRDLTSYAINPERFREEFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 HVPGPECRDLTSYAINPERFREEFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE4 LSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLI 730 740 750 760 770 780 790 800 810 820 pF1KE4 RHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKKVEK :::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKKVEK 790 800 810 820 828 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:02:34 2016 done: Sun Nov 6 04:02:35 2016 Total Scan time: 3.990 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]