FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3089, 257 aa 1>>>pF1KE3089 257 - 257 aa - 257 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5824+/-0.000285; mu= 13.9095+/- 0.018 mean_var=76.0741+/-15.119, 0's: 0 Z-trim(118.9): 12 B-trim: 1023 in 1/51 Lambda= 0.147047 statistics sampled from 32285 (32297) to 32285 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.379), width: 16 Scan time: 6.670 The best scores are: opt bits E(85289) NP_001025046 (OMIM: 610890) regulator of G-protein ( 257) 1727 375.1 6.9e-104 XP_005248559 (OMIM: 610890) PREDICTED: regulator o ( 227) 1379 301.2 1e-81 NP_001258819 (OMIM: 610890) regulator of G-protein ( 124) 826 183.8 1.3e-46 NP_001258820 (OMIM: 610890) regulator of G-protein ( 94) 478 109.9 1.7e-24 NP_997274 (OMIM: 607814,608415) regulator of G-pro ( 235) 163 43.3 0.00048 >>NP_001025046 (OMIM: 610890) regulator of G-protein sig (257 aa) initn: 1727 init1: 1727 opt: 1727 Z-score: 1986.1 bits: 375.1 E(85289): 6.9e-104 Smith-Waterman score: 1727; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257) 10 20 30 40 50 60 pF1KE3 MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NTQVALYRELVISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NTQVALYRELVISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALED 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLPLKNQDDSSLLNLTPYPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLPLKNQDDSSLLNLTPYPL 190 200 210 220 230 240 250 pF1KE3 VRRRKRRFFGLCCLISS ::::::::::::::::: NP_001 VRRRKRRFFGLCCLISS 250 >>XP_005248559 (OMIM: 610890) PREDICTED: regulator of G- (227 aa) initn: 1379 init1: 1379 opt: 1379 Z-score: 1588.0 bits: 301.2 E(85289): 1e-81 Smith-Waterman score: 1379; 98.1% identity (98.6% similar) in 210 aa overlap (1-210:1-210) 10 20 30 40 50 60 pF1KE3 MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NTQVALYRELVISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NTQVALYRELVISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALED 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLPLKNQDDSSLLNLTPYPL :::::::::::::::::::::::: :. : XP_005 SSSSPVDSQQHSWQVSTDIENTERHERNEKPFKQTQGNYAFTIEKSR 190 200 210 220 >>NP_001258819 (OMIM: 610890) regulator of G-protein sig (124 aa) initn: 826 init1: 826 opt: 826 Z-score: 957.8 bits: 183.8 E(85289): 1.3e-46 Smith-Waterman score: 826; 100.0% identity (100.0% similar) in 124 aa overlap (134-257:1-124) 110 120 130 140 150 160 pF1KE3 QKLAAISGPEDGEIHPEICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTK :::::::::::::::::::::::::::::: NP_001 MYTTEMLKSICLLGSLQFHRKGKEPGGGTK 10 20 30 170 180 190 200 210 220 pF1KE3 SLDCKIEESAETPALEDSSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDCKIEESAETPALEDSSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLP 40 50 60 70 80 90 230 240 250 pF1KE3 LKNQDDSSLLNLTPYPLVRRRKRRFFGLCCLISS :::::::::::::::::::::::::::::::::: NP_001 LKNQDDSSLLNLTPYPLVRRRKRRFFGLCCLISS 100 110 120 >>NP_001258820 (OMIM: 610890) regulator of G-protein sig (94 aa) initn: 493 init1: 478 opt: 478 Z-score: 560.6 bits: 109.9 E(85289): 1.7e-24 Smith-Waterman score: 478; 94.8% identity (96.1% similar) in 77 aa overlap (134-210:1-77) 110 120 130 140 150 160 pF1KE3 QKLAAISGPEDGEIHPEICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTK :::::::::::::::::::::::::::::: NP_001 MYTTEMLKSICLLGSLQFHRKGKEPGGGTK 10 20 30 170 180 190 200 210 220 pF1KE3 SLDCKIEESAETPALEDSSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLP ::::::::::::::::::::::::::::::::::::::::: :. : NP_001 SLDCKIEESAETPALEDSSSSPVDSQQHSWQVSTDIENTERHERNEKPFKQTQGNYAFTI 40 50 60 70 80 90 230 240 250 pF1KE3 LKNQDDSSLLNLTPYPLVRRRKRRFFGLCCLISS NP_001 EKSR >>NP_997274 (OMIM: 607814,608415) regulator of G-protein (235 aa) initn: 99 init1: 58 opt: 163 Z-score: 193.6 bits: 43.3 E(85289): 0.00048 Smith-Waterman score: 163; 29.9% identity (67.3% similar) in 107 aa overlap (49-152:2-106) 20 30 40 50 60 70 pF1KE3 SIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEFNTQVALYRELVISIGDVS : ..:: :.. .: .: :..::...: : NP_997 MAREECKALLDGLNKTTACYHHLVLTVGG-S 10 20 30 80 90 100 110 120 130 pF1KE3 VSCPSLRAEMHKTRTKGCEMARQAHQKLAAI---SGPEDGEIHPEICRLYIQLQCCLEMY .. .:: :..::: :. :.: .. .:.:. : : . :. ::.. .. ::.. NP_997 ADSQNLRQELQKTRQKAQELAVSTCARLTAVLRDRGLAADE-RAEFERLWVAFSGCLDLL 40 50 60 70 80 140 150 160 170 180 190 pF1KE3 TTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALEDSSSSPVDSQQHSWQV ..: ... : ... .: NP_997 EADMRRALELGAAFPLHAPRRPLVRTGVAGASSGVAARALSTRSLRLEAEGDFDVADLRE 90 100 110 120 130 140 257 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:26:04 2016 done: Sun Nov 6 04:26:05 2016 Total Scan time: 6.670 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]