FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3089, 257 aa 1>>>pF1KE3089 257 - 257 aa - 257 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6013+/-0.00066; mu= 13.8258+/- 0.040 mean_var=76.0016+/-15.033, 0's: 0 Z-trim(111.8): 4 B-trim: 180 in 1/51 Lambda= 0.147117 statistics sampled from 12628 (12632) to 12628 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.388), width: 16 Scan time: 2.540 The best scores are: opt bits E(32554) CCDS34170.1 RGS7BP gene_id:401190|Hs108|chr5 ( 257) 1727 375.2 2.4e-104 >>CCDS34170.1 RGS7BP gene_id:401190|Hs108|chr5 (257 aa) initn: 1727 init1: 1727 opt: 1727 Z-score: 1986.9 bits: 375.2 E(32554): 2.4e-104 Smith-Waterman score: 1727; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257) 10 20 30 40 50 60 pF1KE3 MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSSAPNGRKKRPSRSTRSSIFQISKPPLQSGDWERRGSGSESAHKTQRALDDCKMLVQEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NTQVALYRELVISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NTQVALYRELVISIGDVSVSCPSLRAEMHKTRTKGCEMARQAHQKLAAISGPEDGEIHPE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ICRLYIQLQCCLEMYTTEMLKSICLLGSLQFHRKGKEPGGGTKSLDCKIEESAETPALED 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLPLKNQDDSSLLNLTPYPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMPLPLKNQDDSSLLNLTPYPL 190 200 210 220 230 240 250 pF1KE3 VRRRKRRFFGLCCLISS ::::::::::::::::: CCDS34 VRRRKRRFFGLCCLISS 250 257 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:26:03 2016 done: Sun Nov 6 04:26:04 2016 Total Scan time: 2.540 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]