(Linear) (Six-base) MAPSORT of: KIEE0898.seq Check: 9781 from: 1 to: 4107 KIEE0898.orf With 182 enzymes: SgfI * September 16, 2010 13:22 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1771 4107 Size: 1771 2336 Acc65I G'GTAC_C Cuts at: 0 1812 4107 Size: 1812 2295 AclI AA'CG_TT Cuts at: 0 2172 4107 Size: 2172 1935 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 536 1073 1271 1571 3110 4107 Size: 536 537 198 300 1539 997 Fragments arranged by size: 1539 997 537 536 300 198 AflIII A'CryG_T Cuts at: 0 3033 4107 Size: 3033 1074 AlwNI CAG_nnn'CTG Cuts at: 0 1314 4107 Size: 1314 2793 ApoI r'AATT_y Cuts at: 0 194 532 565 741 769 895 1017 1095 Size: 194 338 33 176 28 126 122 78 Cuts at: 1095 1575 1965 2159 2221 2258 2356 3150 4107 Size: 480 390 194 62 37 98 794 957 Fragments arranged by size: 957 794 480 390 338 194 194 176 126 122 98 78 62 37 33 28 AseI AT'TA_AT Cuts at: 0 269 2387 4107 Size: 269 2118 1720 Fragments arranged by size: 2118 1720 269 AvaI C'yCGr_G Cuts at: 0 1558 2000 4107 Size: 1558 442 2107 Fragments arranged by size: 2107 1558 442 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 1666 1699 1796 1829 4107 Size: 1666 33 97 33 2278 Fragments arranged by size: 2278 1666 97 33 33 BanI G'GyrC_C Cuts at: 0 1812 3265 4107 Size: 1812 1453 842 Fragments arranged by size: 1812 1453 842 BanII G_rGCy'C Cuts at: 0 173 4107 Size: 173 3934 BbsI GAAGACnn'nnnn_ Cuts at: 0 357 929 2065 3919 4107 Size: 357 572 1136 1854 188 Fragments arranged by size: 1854 1136 572 357 188 BbvCI CC'TCA_GC Cuts at: 0 3122 4107 Size: 3122 985 BclI T'GATC_A Cuts at: 0 302 3134 4107 Size: 302 2832 973 Fragments arranged by size: 2832 973 302 BfrBI ATG'CAT Cuts at: 0 3421 4107 Size: 3421 686 BglI GCCn_nnn'nGGC Cuts at: 0 103 4107 Size: 103 4004 BglII A'GATC_T Cuts at: 0 3363 4107 Size: 3363 744 BlpI GC'TnA_GC Cuts at: 0 1307 4107 Size: 1307 2800 BmrI ACTGGGnnnn_n' Cuts at: 0 2431 3283 4107 Size: 2431 852 824 Fragments arranged by size: 2431 852 824 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 14 147 1420 1976 2468 2744 4107 Size: 14 133 1273 556 492 276 1363 Fragments arranged by size: 1363 1273 556 492 276 133 14 Bpu10I CC'TnA_GC Cuts at: 0 878 2050 3122 4107 Size: 878 1172 1072 985 Fragments arranged by size: 1172 1072 985 878 BsaAI yAC'GTr Cuts at: 0 1462 3034 4107 Size: 1462 1572 1073 Fragments arranged by size: 1572 1462 1073 BsaBI GATnn'nnATC Cuts at: 0 2465 3570 4107 Size: 2465 1105 537 Fragments arranged by size: 2465 1105 537 BsaWI w'CCGG_w Cuts at: 0 1988 4107 Size: 1988 2119 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 566 775 3110 4107 Size: 566 209 2335 997 Fragments arranged by size: 2335 997 566 209 BseYI C'CCAG_C Cuts at: 0 942 2944 3593 4107 Size: 942 2002 649 514 Fragments arranged by size: 2002 942 649 514 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1586 4107 Size: 1586 2521 BsiEI CG_ry'CG Cuts at: 0 38 4107 Size: 38 4069 BsiHKAI G_wGCw'C Cuts at: 0 2454 4107 Size: 2454 1653 BsmI GAATG_Cn' Cuts at: 0 1524 2709 2743 4107 Size: 1524 1185 34 1364 Fragments arranged by size: 1524 1364 1185 34 BsmBI CGTCTCn'nnnn_ Cuts at: 0 2794 2893 3736 4107 Size: 2794 99 843 371 Fragments arranged by size: 2794 843 371 99 Bsp1286I G_dGCh'C Cuts at: 0 173 2454 4107 Size: 173 2281 1653 Fragments arranged by size: 2281 1653 173 BspEI T'CCGG_A Cuts at: 0 1988 4107 Size: 1988 2119 BspHI T'CATG_A Cuts at: 0 1083 2112 4107 Size: 1083 1029 1995 Fragments arranged by size: 1995 1083 1029 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1771 4107 Size: 1771 2336 BsrDI GCAATG_nn' Cuts at: 0 604 3147 3152 4107 Size: 604 2543 5 955 Fragments arranged by size: 2543 955 604 5 BsrFI r'CCGG_y Cuts at: 0 132 157 4107 Size: 132 25 3950 Fragments arranged by size: 3950 132 25 BsrGI T'GTAC_A Cuts at: 0 2032 2978 4107 Size: 2032 946 1129 Fragments arranged by size: 2032 1129 946 BstAPI GCAn_nnn'nTGC Cuts at: 0 3367 4107 Size: 3367 740 BstEII G'GTnAC_C Cuts at: 0 457 4107 Size: 457 3650 BstYI r'GATC_y Cuts at: 0 1554 1985 2541 3114 3363 3947 4107 Size: 1554 431 556 573 249 584 160 Fragments arranged by size: 1554 584 573 556 431 249 160 BtgI C'CryG_G Cuts at: 0 38 3386 4107 Size: 38 3348 721 Fragments arranged by size: 3348 721 38 BtsI GCAGTG_nn' Cuts at: 0 2241 4107 Size: 2241 1866 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 3324 3359 3689 3724 4107 Size: 3324 35 330 35 383 Fragments arranged by size: 3324 383 330 35 35 DraI TTT'AAA Cuts at: 0 843 1725 2465 4107 Size: 843 882 740 1642 Fragments arranged by size: 1642 882 843 740 DrdI GACnn_nn'nnGTC Cuts at: 0 3321 4107 Size: 3321 786 EaeI y'GGCC_r Cuts at: 0 35 134 3383 4107 Size: 35 99 3249 724 Fragments arranged by size: 3249 724 99 35 EagI C'GGCC_G Cuts at: 0 35 4107 Size: 35 4072 EarI CTCTTCn'nnn_ Cuts at: 0 533 626 752 1052 2360 2934 4107 Size: 533 93 126 300 1308 574 1173 Fragments arranged by size: 1308 1173 574 533 300 126 93 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 3406 4107 Size: 3406 701 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 14 147 536 1073 1271 1420 1571 1976 Size: 14 133 389 537 198 149 151 405 Cuts at: 1976 2468 2744 3110 4107 Size: 492 276 366 997 Fragments arranged by size: 997 537 492 405 389 366 276 198 151 149 133 14 EcoO109I rG'GnC_Cy Cuts at: 0 636 3960 4107 Size: 636 3324 147 Fragments arranged by size: 3324 636 147 EcoRI G'AATT_C Cuts at: 0 741 1965 4107 Size: 741 1224 2142 Fragments arranged by size: 2142 1224 741 EcoRV GAT'ATC Cuts at: 0 1981 4107 Size: 1981 2126 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 1855 2089 3382 4107 Size: 1855 234 1293 725 Fragments arranged by size: 1855 1293 725 234 FseI GG_CCGG'CC Cuts at: 0 136 4107 Size: 136 3971 HaeII r_GCGC'y Cuts at: 0 2934 4107 Size: 2934 1173 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 945 977 1170 1202 1970 1983 2002 2015 Size: 945 32 193 32 768 13 19 13 Cuts at: 2015 2644 2676 3085 3117 4107 Size: 629 32 409 32 990 Fragments arranged by size: 990 945 768 629 409 193 32 32 32 32 19 13 13 HincII GTy'rAC Cuts at: 0 3515 4107 Size: 3515 592 HindIII A'AGCT_T Cuts at: 0 4027 4107 Size: 4027 80 HpaI GTT'AAC Cuts at: 0 3515 4107 Size: 3515 592 KpnI G_GTAC'C Cuts at: 0 1816 4107 Size: 1816 2291 MfeI C'AATT_G Cuts at: 0 1739 3341 4107 Size: 1739 1602 766 Fragments arranged by size: 1739 1602 766 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1099 4107 Size: 1099 3008 MscI TGG'CCA Cuts at: 0 3385 4107 Size: 3385 722 MspA1I CmG'CkG Cuts at: 0 34 40 142 148 154 1045 3593 3993 Size: 34 6 102 6 6 891 2548 400 Cuts at: 3993 4107 Size: 114 Fragments arranged by size: 2548 891 400 114 102 34 6 6 6 NaeI GCC'GGC Cuts at: 0 134 159 4107 Size: 134 25 3948 Fragments arranged by size: 3948 134 25 NcoI C'CATG_G Cuts at: 0 3386 4107 Size: 3386 721 NdeI CA'TA_TG Cuts at: 0 627 4107 Size: 627 3480 NgoMIV G'CCGG_C Cuts at: 0 132 157 4107 Size: 132 25 3950 Fragments arranged by size: 3950 132 25 NotI GC'GGCC_GC Cuts at: 0 35 4107 Size: 35 4072 NsiI A_TGCA'T Cuts at: 0 3423 4107 Size: 3423 684 NspI r_CATG'y Cuts at: 0 1302 2458 2506 4107 Size: 1302 1156 48 1601 Fragments arranged by size: 1601 1302 1156 48 PfoI T'CCnGG_A Cuts at: 0 2760 4107 Size: 2760 1347 PmlI CAC'GTG Cuts at: 0 1462 4107 Size: 1462 2645 PpuMI rG'GwC_Cy Cuts at: 0 636 4107 Size: 636 3471 PshAI GACnn'nnGTC Cuts at: 0 2905 4107 Size: 2905 1202 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 2093 2125 3066 3098 4107 Size: 2093 32 941 32 1009 Fragments arranged by size: 2093 1009 941 32 32 PstI C_TGCA'G Cuts at: 0 1044 2742 3309 4073 4107 Size: 1044 1698 567 764 34 Fragments arranged by size: 1698 1044 764 567 34 PvuII CAG'CTG Cuts at: 0 1045 3593 3993 4107 Size: 1045 2548 400 114 Fragments arranged by size: 2548 1045 400 114 SacII CC_GC'GG Cuts at: 0 41 4107 Size: 41 4066 SapI GCTCTTCn'nnn_ Cuts at: 0 533 2934 4107 Size: 533 2401 1173 Fragments arranged by size: 2401 1173 533 ScaI AGT'ACT Cuts at: 0 1806 4107 Size: 1806 2301 SexAI A'CCwGG_T Cuts at: 0 2017 4107 Size: 2017 2090 SfcI C'TryA_G Cuts at: 0 989 1040 2738 3305 4069 4107 Size: 989 51 1698 567 764 38 Fragments arranged by size: 1698 989 764 567 51 38 SmlI C'TyrA_G Cuts at: 0 2000 4107 Size: 2000 2107 SphI G_CATG'C Cuts at: 0 1302 2506 4107 Size: 1302 1204 1601 Fragments arranged by size: 1601 1302 1204 SspI AAT'ATT Cuts at: 0 2347 2595 2793 4107 Size: 2347 248 198 1314 Fragments arranged by size: 2347 1314 248 198 StuI AGG'CCT Cuts at: 0 561 4107 Size: 561 3546 StyI C'CwwG_G Cuts at: 0 473 1610 3386 3750 4107 Size: 473 1137 1776 364 357 Fragments arranged by size: 1776 1137 473 364 357 SwaI ATTT'AAAT Cuts at: 0 2465 4107 Size: 2465 1642 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 3785 4107 Size: 3785 322 TatI w'GTAC_w Cuts at: 0 1804 2032 2325 2483 2978 3654 3765 4107 Size: 1804 228 293 158 495 676 111 342 Fragments arranged by size: 1804 676 495 342 293 228 158 111 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 2941 4107 Size: 2941 1166 XhoI C'TCGA_G Cuts at: 0 2000 4107 Size: 2000 2107 XmnI GAAnn'nnTTC Cuts at: 0 342 1202 1965 3926 4107 Size: 342 860 763 1961 181 Fragments arranged by size: 1961 860 763 342 181 Enzymes that do cut: AarI Acc65I AclI AcuI AflIII AlwNI ApoI AseI AvaI BaeI BanI BanII BbsI BbvCI BclI BfrBI BglI BglII BlpI BmrI BpmI Bpu10I BsaAI BsaBI BsaWI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrDI BsrFI BsrGI BstAPI BstEII BstYI BtgI BtsI CspCI DraI DrdI EaeI EagI EarI EciI Eco57MI EcoO109I EcoRI EcoRV FalI FseI HaeII Hin4I HincII HindIII HpaI KpnI MfeI MmeI MscI MspA1I NaeI NcoI NdeI NgoMIV NotI NsiI NspI PfoI PmlI PpuMI PshAI PsrI PstI PvuII SacII SapI ScaI SexAI SfcI SmlI SphI SspI StuI StyI SwaI TaqII TatI XcmI XhoI XmnI Enzymes that do not cut: AatII AccI AfeI AflII AgeI AhdI AleI AlfI AloI ApaI ApaLI AscI AsiSI AvrII BamHI BbeI BcgI BciVI Bme1580I BmgBI BmtI BplI BpuEI BsaI BsaHI BsaXI BsiWI BsrBI BssHII BssSI BstBI BstXI BstZ17I Bsu36I BtgZI ClaI DraIII EcoICRI EcoNI FspI FspAI KasI MluI MslI NarI NheI NruI PacI PasI PciI PflMI PmeI PpiI PsiI PspOMI PspXI PvuI RsrII SacI SalI SanDI SbfI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SrfI TstI Tth111I XbaI XmaI ZraI