FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1613, 125 aa 1>>>pF1KE1613 125 - 125 aa - 125 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6659+/-0.000688; mu= 10.5338+/- 0.042 mean_var=88.7704+/-17.221, 0's: 0 Z-trim(112.8): 24 B-trim: 249 in 1/51 Lambda= 0.136126 statistics sampled from 13459 (13478) to 13459 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.414), width: 16 Scan time: 1.670 The best scores are: opt bits E(32554) CCDS34014.1 CXCL9 gene_id:4283|Hs108|chr4 ( 125) 806 166.9 2.9e-42 >>CCDS34014.1 CXCL9 gene_id:4283|Hs108|chr4 (125 aa) initn: 806 init1: 806 opt: 806 Z-score: 872.1 bits: 166.9 E(32554): 2.9e-42 Smith-Waterman score: 806; 100.0% identity (100.0% similar) in 125 aa overlap (1-125:1-125) 10 20 30 40 50 60 pF1KE1 MKKSGVLFLLGIILLVLIGVQGTPVVRKGRCSCISTNQGTIHLQSLKDLKQFAPSPSCEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MKKSGVLFLLGIILLVLIGVQGTPVVRKGRCSCISTNQGTIHLQSLKDLKQFAPSPSCEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 IEIIATLKNGVQTCLNPDSADVKELIKKWEKQVSQKKKQKNGKKHQKKKVLKVRKSQRSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 IEIIATLKNGVQTCLNPDSADVKELIKKWEKQVSQKKKQKNGKKHQKKKVLKVRKSQRSR 70 80 90 100 110 120 pF1KE1 QKKTT ::::: CCDS34 QKKTT 125 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 11:23:56 2016 done: Sun Nov 6 11:23:57 2016 Total Scan time: 1.670 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]