FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2437, 455 aa 1>>>pF1KE2437 455 - 455 aa - 455 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.3757+/-0.000415; mu= -6.8811+/- 0.026 mean_var=495.5540+/-102.221, 0's: 0 Z-trim(124.8): 442 B-trim: 2029 in 1/60 Lambda= 0.057614 statistics sampled from 46784 (47259) to 46784 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.554), width: 16 Scan time: 8.700 The best scores are: opt bits E(85289) NP_005668 (OMIM: 603033,603034) acetylcholinestera ( 455) 3379 295.0 2.8e-79 NP_536799 (OMIM: 603033,603034) acetylcholinestera ( 445) 3163 277.0 7e-74 NP_536800 (OMIM: 603033,603034) acetylcholinestera ( 421) 2627 232.4 1.7e-60 NP_065084 (OMIM: 120251) collagen alpha-1(VIII) ch ( 744) 679 70.8 1.4e-11 NP_001841 (OMIM: 120251) collagen alpha-1(VIII) ch ( 744) 679 70.8 1.4e-11 XP_011532992 (OMIM: 610043) PREDICTED: collagen al ( 548) 674 70.2 1.5e-11 XP_016883155 (OMIM: 120270,600969,603932) PREDICTE ( 486) 672 70.0 1.6e-11 XP_011526847 (OMIM: 120270,600969,603932) PREDICTE ( 552) 672 70.1 1.7e-11 XP_011526344 (OMIM: 120216) PREDICTED: collagen al (1744) 684 71.7 1.8e-11 NP_056534 (OMIM: 120216) collagen alpha-3(V) chain (1745) 684 71.7 1.8e-11 NP_001844 (OMIM: 120270,600969,603932) collagen al ( 684) 672 70.2 2e-11 XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 679 71.2 2.4e-11 NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 679 71.3 2.5e-11 NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 679 71.3 2.5e-11 XP_011517442 (OMIM: 608461,615155) PREDICTED: coll (1842) 672 70.7 3.8e-11 XP_011508875 (OMIM: 120190,130000) PREDICTED: coll (1453) 669 70.3 3.8e-11 NP_000384 (OMIM: 120190,130000) collagen alpha-2(V (1499) 669 70.3 3.9e-11 XP_016855830 (OMIM: 120326) PREDICTED: collagen al (1028) 664 69.7 4.1e-11 XP_016855829 (OMIM: 120326) PREDICTED: collagen al (1077) 664 69.7 4.2e-11 XP_011539030 (OMIM: 120326) PREDICTED: collagen al (1089) 664 69.8 4.2e-11 NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 666 70.1 4.6e-11 XP_011533735 (OMIM: 120110,156500) PREDICTED: coll ( 680) 657 68.9 4.7e-11 NP_000484 (OMIM: 120110,156500) collagen alpha-1(X ( 680) 657 68.9 4.7e-11 XP_016865737 (OMIM: 120110,156500) PREDICTED: coll ( 680) 657 68.9 4.7e-11 XP_016865738 (OMIM: 120110,156500) PREDICTED: coll ( 680) 657 68.9 4.7e-11 XP_006715396 (OMIM: 120110,156500) PREDICTED: coll ( 680) 657 68.9 4.7e-11 XP_011533734 (OMIM: 120110,156500) PREDICTED: coll ( 680) 657 68.9 4.7e-11 XP_011539029 (OMIM: 120326) PREDICTED: collagen al (1302) 664 69.8 4.8e-11 XP_011519350 (OMIM: 120130,175780,180000,607595,61 (1605) 666 70.1 4.9e-11 NP_001836 (OMIM: 120130,175780,180000,607595,61177 (1669) 666 70.1 5e-11 XP_011539026 (OMIM: 120326) PREDICTED: collagen al (1563) 664 69.9 5.4e-11 XP_005270538 (OMIM: 120326) PREDICTED: collagen al (1588) 664 69.9 5.4e-11 XP_016855828 (OMIM: 120326) PREDICTED: collagen al (1592) 664 69.9 5.4e-11 XP_016855827 (OMIM: 120326) PREDICTED: collagen al (1593) 664 69.9 5.4e-11 NP_001847 (OMIM: 120326) collagen alpha-1(XVI) cha (1604) 664 69.9 5.5e-11 XP_011517447 (OMIM: 608461,615155) PREDICTED: coll (1049) 656 69.1 6.6e-11 XP_006717373 (OMIM: 608461,615155) PREDICTED: coll (1087) 656 69.1 6.7e-11 XP_016874320 (OMIM: 108300,120140,132450,150600,15 (1305) 658 69.3 6.8e-11 NP_149162 (OMIM: 108300,120140,132450,150600,15121 (1418) 658 69.4 7.1e-11 XP_016874319 (OMIM: 108300,120140,132450,150600,15 (1465) 658 69.4 7.3e-11 NP_001835 (OMIM: 108300,120140,132450,150600,15121 (1487) 658 69.4 7.4e-11 XP_016874318 (OMIM: 108300,120140,132450,150600,15 (1534) 658 69.4 7.5e-11 XP_016874317 (OMIM: 108300,120140,132450,150600,15 (1535) 658 69.4 7.5e-11 XP_016870728 (OMIM: 608461,615155) PREDICTED: coll (1214) 655 69.1 7.7e-11 XP_011539019 (OMIM: 120260,600204,603932,614284) P ( 508) 645 67.8 7.7e-11 XP_011517446 (OMIM: 608461,615155) PREDICTED: coll (1352) 656 69.2 7.8e-11 XP_011517445 (OMIM: 608461,615155) PREDICTED: coll (1353) 656 69.2 7.8e-11 NP_000485 (OMIM: 113811,122400,226650) collagen al (1497) 657 69.3 7.8e-11 XP_005257116 (OMIM: 114000,120150,130000,130060,16 (1158) 654 69.0 7.9e-11 XP_011522643 (OMIM: 114000,120150,130000,130060,16 (1398) 656 69.2 7.9e-11 >>NP_005668 (OMIM: 603033,603034) acetylcholinesterase c (455 aa) initn: 3379 init1: 3379 opt: 3379 Z-score: 1544.3 bits: 295.0 E(85289): 2.8e-79 Smith-Waterman score: 3379; 100.0% identity (100.0% similar) in 455 aa overlap (1-455:1-455) 10 20 30 40 50 60 pF1KE2 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKKRGGHKACCLLTPPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKKRGGHKACCLLTPPPPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 EKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 EKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 SRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 QKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 QKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 NPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 NPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 PFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 PFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGS 370 380 390 400 410 420 430 440 450 pF1KE2 DFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT ::::::::::::::::::::::::::::::::::: NP_005 DFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT 430 440 450 >>NP_536799 (OMIM: 603033,603034) acetylcholinesterase c (445 aa) initn: 3162 init1: 3162 opt: 3163 Z-score: 1447.4 bits: 277.0 E(85289): 7e-74 Smith-Waterman score: 3163; 98.1% identity (98.8% similar) in 432 aa overlap (27-455:14-445) 10 20 30 40 50 pF1KE2 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISA---ALPSLDQKKRGGHKACCLLTPP :...: :: :::::::::::::::::::::: NP_536 MTGSSFSLAHLLIISGLLCYSAGCLALPSLDQKKRGGHKACCLLTPP 10 20 30 40 60 70 80 90 100 110 pF1KE2 PPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 PPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTG 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE2 PKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 PKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKG 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 YPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 YPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRG 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 KQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 KQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTM 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 NVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 NVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPI 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE2 QLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 QLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDC 350 360 370 380 390 400 420 430 440 450 pF1KE2 DGSDFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT :::::::::::::::::::::::::::::::::::::: NP_536 DGSDFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT 410 420 430 440 >>NP_536800 (OMIM: 603033,603034) acetylcholinesterase c (421 aa) initn: 3125 init1: 2626 opt: 2627 Z-score: 1206.9 bits: 232.4 E(85289): 1.7e-60 Smith-Waterman score: 3061; 92.5% identity (92.5% similar) in 455 aa overlap (1-455:1-421) 10 20 30 40 50 60 pF1KE2 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKKRGGHKACCLLTPPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKKRGGHKACCLLTPPPPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKG ::::::::::::: ::::::::::::: NP_536 LFPPPFFRGGRSP----------------------------------GPPGLPGKTGPKG 70 80 130 140 150 160 170 180 pF1KE2 EKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 EKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPG 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE2 SRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 SRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQG 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE2 QKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 QKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERGFPGPPGRCLCGPTMNVN 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE2 NPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 NPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLT 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE2 PFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_536 PFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCGDGHRHEGVEDCDGS 330 340 350 360 370 380 430 440 450 pF1KE2 DFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT ::::::::::::::::::::::::::::::::::: NP_536 DFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT 390 400 410 420 >>NP_065084 (OMIM: 120251) collagen alpha-1(VIII) chain (744 aa) initn: 1423 init1: 564 opt: 679 Z-score: 328.9 bits: 70.8 E(85289): 1.4e-11 Smith-Waterman score: 719; 45.2% identity (58.4% similar) in 250 aa overlap (65-289:327-563) 40 50 60 70 80 90 pF1KE2 AALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCM : : ::.. : . . : . NP_065 PQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPG---------PPGL 300 310 320 330 340 100 110 120 130 140 150 pF1KE2 QGSLGSPGPPGPQGPPGL---PGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGP : .:.:: :::.: :. :: ::.:::: .: :: : :: ::.::.:::.: :: NP_065 PG-IGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGA 350 360 370 380 390 400 160 170 180 190 200 pF1KE2 ---EGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRG------EKGSRGEKGDLGPKGEKGF ::.:: : .: .: :: .: : .:.::. : : :: : .::::: : NP_065 IGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQ 410 420 430 440 450 460 210 220 230 240 250 260 pF1KE2 PGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGR : ::. : : .:::::::: : .: : :: : : :: .:::: :::.:.:: NP_065 KGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGI---PGIGGPSGPIGPPGIPGPKGEPGL 470 480 490 500 510 520 270 280 290 300 pF1KE2 PGPPG-P------------PPAGQLIMGPKGERGFPGPPGRCLCGPTMNVNNPSYGESVY ::::: : ::. .::.:. :.::::: NP_065 PGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGE 530 540 550 560 570 580 310 320 330 340 350 360 pF1KE2 GPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTA NP_065 YLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGR 590 600 610 620 630 640 >-- initn: 487 init1: 246 opt: 535 Z-score: 264.2 bits: 58.8 E(85289): 5.6e-08 Smith-Waterman score: 653; 40.2% identity (55.1% similar) in 276 aa overlap (24-289:45-311) 10 20 30 40 50 pF1KE2 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKKRG---GHKA : : . :.. .: . : : :.. NP_065 LTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEM 20 30 40 50 60 70 60 70 80 90 100 pF1KE2 CCLLTPPPPPLFPPPFFRGGRSPLLSPD-MKNLMLELETSQSPCMQGSLGSPGPPGPQGP : : .: . . .: .. . . . :. .. :: : ::: :: :: NP_065 PHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGP 80 90 100 110 120 130 110 120 130 140 150 160 pF1KE2 PGLPGKTGP--KGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLP :::::. : ::. : : :: :.:: ::.:: :: .: :: .: :.::..: ::.: NP_065 PGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIP 140 150 160 170 180 190 170 180 190 200 210 220 pF1KE2 GSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKG--EPGIAG : .:: : .: :: :. :. : :. ::::..: :.:: : .: : :: :: : NP_065 GPQGPPGPHGLPGI-GKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPG 200 210 220 230 240 250 230 240 250 260 270 280 pF1KE2 HRGPTGRPGKRGKQGQKG--DSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERG .:: : : : : : :: : :: :: :.:: :: ::: .:: : : NP_065 VKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGP-------QGPIGVPG 260 270 280 290 300 290 300 310 320 330 340 pF1KE2 FPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQ :::: NP_065 VQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMG 310 320 330 340 350 360 >>NP_001841 (OMIM: 120251) collagen alpha-1(VIII) chain (744 aa) initn: 1423 init1: 564 opt: 679 Z-score: 328.9 bits: 70.8 E(85289): 1.4e-11 Smith-Waterman score: 719; 45.2% identity (58.4% similar) in 250 aa overlap (65-289:327-563) 40 50 60 70 80 90 pF1KE2 AALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLELETSQSPCM : : ::.. : . . : . NP_001 PQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPG---------PPGL 300 310 320 330 340 100 110 120 130 140 150 pF1KE2 QGSLGSPGPPGPQGPPGL---PGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGP : .:.:: :::.: :. :: ::.:::: .: :: : :: ::.::.:::.: :: NP_001 PG-IGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGA 350 360 370 380 390 400 160 170 180 190 200 pF1KE2 ---EGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRG------EKGSRGEKGDLGPKGEKGF ::.:: : .: .: :: .: : .:.::. : : :: : .::::: : NP_001 IGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQ 410 420 430 440 450 460 210 220 230 240 250 260 pF1KE2 PGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGR : ::. : : .:::::::: : .: : :: : : :: .:::: :::.:.:: NP_001 KGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGI---PGIGGPSGPIGPPGIPGPKGEPGL 470 480 490 500 510 520 270 280 290 300 pF1KE2 PGPPG-P------------PPAGQLIMGPKGERGFPGPPGRCLCGPTMNVNNPSYGESVY ::::: : ::. .::.:. :.::::: NP_001 PGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGE 530 540 550 560 570 580 310 320 330 340 350 360 pF1KE2 GPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTA NP_001 YLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGR 590 600 610 620 630 640 >-- initn: 487 init1: 246 opt: 535 Z-score: 264.2 bits: 58.8 E(85289): 5.6e-08 Smith-Waterman score: 653; 40.2% identity (55.1% similar) in 276 aa overlap (24-289:45-311) 10 20 30 40 50 pF1KE2 MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAALPSLDQKKRG---GHKA : : . :.. .: . : : :.. NP_001 LTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEM 20 30 40 50 60 70 60 70 80 90 100 pF1KE2 CCLLTPPPPPLFPPPFFRGGRSPLLSPD-MKNLMLELETSQSPCMQGSLGSPGPPGPQGP : : .: . . .: .. . . . :. .. :: : ::: :: :: NP_001 PHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGP 80 90 100 110 120 130 110 120 130 140 150 160 pF1KE2 PGLPGKTGP--KGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLP :::::. : ::. : : :: :.:: ::.:: :: .: :: .: :.::..: ::.: NP_001 PGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIP 140 150 160 170 180 190 170 180 190 200 210 220 pF1KE2 GSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKG--EPGIAG : .:: : .: :: :. :. : :. ::::..: :.:: : .: : :: :: : NP_001 GPQGPPGPHGLPGI-GKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPG 200 210 220 230 240 250 230 240 250 260 270 280 pF1KE2 HRGPTGRPGKRGKQGQKG--DSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGERG .:: : : : : : :: : :: :: :.:: :: ::: .:: : : NP_001 VKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGP-------QGPIGVPG 260 270 280 290 300 290 300 310 320 330 340 pF1KE2 FPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQ :::: NP_001 VQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMG 310 320 330 340 350 360 >>XP_011532992 (OMIM: 610043) PREDICTED: collagen alpha- (548 aa) initn: 1804 init1: 521 opt: 674 Z-score: 328.2 bits: 70.2 E(85289): 1.5e-11 Smith-Waterman score: 674; 47.8% identity (58.8% similar) in 228 aa overlap (96-312:130-350) 70 80 90 100 110 120 pF1KE2 FFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGEL : :.:::::: : : :: :::::::. XP_011 LDGLAKIRTAREAPSECVCPPGPPGRRGKPGRRGDPGPPGPLGLDGKPGLPGPKGEKGDQ 100 110 120 130 140 150 130 140 150 160 170 180 pF1KE2 GRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGEK :. : : ::::: :: :: : : .:::: .: : : ::. : :: :: :: .:: XP_011 GQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEP 160 170 180 190 200 210 190 200 210 220 230 240 pF1KE2 GSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDS : :.::: : .. :: :: :. : :::.:: :. : :: :.::.:: .: : XP_011 GVPGKKGDDGTPSQ---PGPPGPKGEPGSMGPRGENGVDGAPGPKGEPGHRGTDGAAGPR 220 230 240 250 260 270 250 260 270 280 290 pF1KE2 GVMGPPGKPGPS---GQPGR-----PGPPGP--PPAGQLIMGPKGERGFPGPPG-RCLCG :. : :. : . :: ::::: ::. : : ::: :.:: :: : XP_011 GAPGLKGEQGDTVVIDYDGRILDALKGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKG 280 290 300 310 320 330 300 310 320 330 340 350 pF1KE2 PTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGW : . ..: :: ::. XP_011 PKGQKGDP--GEP--GPAGLKGEAGEMGLSGLPGADGLKGEKGESASDSLQESLAQLIVE 340 350 360 370 380 390 >-- initn: 728 init1: 389 opt: 465 Z-score: 234.4 bits: 52.9 E(85289): 2.6e-06 Smith-Waterman score: 492; 44.4% identity (57.0% similar) in 207 aa overlap (99-295:351-537) 70 80 90 100 110 120 pF1KE2 GGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGELGRP : : : .: :::: : :::::: . XP_011 GELGLPGAPGIDGEKGPKGQKGDPGEPGPAGLKGEAGEMGLSGLPGADGLKGEKGESASD 330 340 350 360 370 380 130 140 150 160 170 180 pF1KE2 GRKGRPGPPGV-PGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGEKGS . . . : :: ::: ::: :: ::: : .:: :: :..::::. XP_011 SLQESLAQLIVEPGPPGP---PGPPGP---------MGLQGIQGP---KGLDGAKGEKGA 390 400 410 420 190 200 210 220 230 240 pF1KE2 RGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGV ::.: : : : ::. :. : ::: : ::::. : :: :. : :...:.::. :: XP_011 SGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKGERGV 430 440 450 460 470 480 250 260 270 280 290 pF1KE2 MGPPGKPGPSGQPGRPGPPG---PPPAGQLIMGPKGERGFPG--PPGR----CLCGPTMN ::. : .:: :.::::: : :. . : :.:: :: :.: : :: XP_011 ---PGRKGVKGQKGEPGPPGLDQPCPVENPTCG--GRRGAPGWRGPARGNGPCPAGPDGL 490 500 510 520 530 540 300 310 320 330 340 350 pF1KE2 VNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQ XP_011 PVPGCWHK >>XP_016883155 (OMIM: 120270,600969,603932) PREDICTED: c (486 aa) initn: 1041 init1: 589 opt: 672 Z-score: 328.0 bits: 70.0 E(85289): 1.6e-11 Smith-Waterman score: 674; 41.2% identity (55.8% similar) in 301 aa overlap (56-317:140-431) 30 40 50 60 70 80 pF1KE2 FINSVLPISAALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLE :: : .: . : .: : ... : XP_016 GPPGLGGKGLPGPPGEAGVSGPPGGIGLRGPPGPSGLPG--LPGPPGPPGPPGHPGVLPE 110 120 130 140 150 160 90 100 110 120 130 140 pF1KE2 LETS-QSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGELGRPGRKGRPGPPGVPGMPG :. : : :. :::::: : ::. : :: :::.::.:. :.:: ::::: :.:: XP_016 GATDLQCP----SICPPGPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPG 170 180 190 200 210 220 150 160 170 180 190 pF1KE2 PIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPG---------SRGEKGS---RGEKG .: ::.: :: : :: ::.:::.: .: :: .:::.: :: :: XP_016 SVGLQGPRGLRGLPGPLGP---PGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKG 230 240 250 260 270 280 200 210 220 230 pF1KE2 DLG------------PKGEKGFPG------FPGMLGQKGEMGPKGEPGIAGHRGPTGRPG ::: :.:: :.:: ::. ::::: : .: :: : : : :: XP_016 DLGRPGPKGTPGVAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPG 290 300 310 320 330 340 240 250 260 270 280 pF1KE2 KRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPP----PAGQL-IMGPKGERGFPGPPG . :..:.::. : : :. ::::.:: :: : : ::. : : .: :: :: XP_016 RAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPG 350 360 370 380 390 400 290 300 310 320 330 340 pF1KE2 -RCLCGPTMNVNNPSYG--ESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSL : . : ....:. ... : . : : XP_016 VRGFQGQKGSMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSG 410 420 430 440 450 460 350 360 370 380 390 400 pF1KE2 YFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCG XP_016 LVGPKGEEVTLRGDGGNASPRLPPPC 470 480 >>XP_011526847 (OMIM: 120270,600969,603932) PREDICTED: c (552 aa) initn: 1613 init1: 586 opt: 672 Z-score: 327.3 bits: 70.1 E(85289): 1.7e-11 Smith-Waterman score: 674; 41.2% identity (55.8% similar) in 301 aa overlap (56-317:140-431) 30 40 50 60 70 80 pF1KE2 FINSVLPISAALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLE :: : .: . : .: : ... : XP_011 GPPGLGGKGLPGPPGEAGVSGPPGGIGLRGPPGPSGLPG--LPGPPGPPGPPGHPGVLPE 110 120 130 140 150 160 90 100 110 120 130 140 pF1KE2 LETS-QSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGELGRPGRKGRPGPPGVPGMPG :. : : :. :::::: : ::. : :: :::.::.:. :.:: ::::: :.:: XP_011 GATDLQCP----SICPPGPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPG 170 180 190 200 210 220 150 160 170 180 190 pF1KE2 PIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPG---------SRGEKGS---RGEKG .: ::.: :: : :: ::.:::.: .: :: .:::.: :: :: XP_011 SVGLQGPRGLRGLPGPLGP---PGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKG 230 240 250 260 270 280 200 210 220 230 pF1KE2 DLG------------PKGEKGFPG------FPGMLGQKGEMGPKGEPGIAGHRGPTGRPG ::: :.:: :.:: ::. ::::: : .: :: : : : :: XP_011 DLGRPGPKGTPGVAGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPG 290 300 310 320 330 340 240 250 260 270 280 pF1KE2 KRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPP----PAGQL-IMGPKGERGFPGPPG . :..:.::. : : :. ::::.:: :: : : ::. : : .: :: :: XP_011 RAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPG 350 360 370 380 390 400 290 300 310 320 330 340 pF1KE2 -RCLCGPTMNVNNPSYG--ESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRRDQRSL : . : ....:. ... : . : : XP_011 VRGFQGQKGSMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSG 410 420 430 440 450 460 350 360 370 380 390 400 pF1KE2 YFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCHRAYCG XP_011 LVGPKGESGSRGELGPKGTQGPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEA 470 480 490 500 510 520 >>XP_011526344 (OMIM: 120216) PREDICTED: collagen alpha- (1744 aa) initn: 609 init1: 609 opt: 684 Z-score: 326.8 bits: 71.7 E(85289): 1.8e-11 Smith-Waterman score: 695; 44.3% identity (60.6% similar) in 264 aa overlap (56-315:597-837) 30 40 50 60 70 80 pF1KE2 FINSVLPISAALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLE : : :. : ::. .: : . .. XP_011 FGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGP---RGSPGPTGRPGVTGI--- 570 580 590 600 610 620 90 100 110 120 130 140 pF1KE2 LETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGELGRPGRKGRPGPPGVPGMPG- . .: .:..: :: ::: : : :. : : .: .: ::.:: :: ::.::.:: XP_011 ---DGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGS 630 640 650 660 670 150 160 170 180 190 200 pF1KE2 --PIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGF :.: :: ::: :::: .: ::: :: :::: :: ::. :..: : ::::: XP_011 DGPLGHPGHEGPTGEKG---AQGPPGSAGP---PGYPGPRGVKGTSGNRGLQGEKGEKGE 680 690 700 710 720 730 210 220 230 240 250 260 pF1KE2 PGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGR ::::. ::..: ::. : : :: :. : .: .:: :..: ::::. : .:. : XP_011 DGFPGF---KGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGV 740 750 760 770 780 270 280 290 300 310 320 pF1KE2 PGPPGPPPAGQLIMGPKGERGFPGPPGRC-LCGPTMNVNNPSYGESVYGPSSPRVPVIFV :: :: : :. :::: ::::: : : . ....:. :. :: . : XP_011 PGLPGYP--GR--PGPKGSIGFPGPLGPIGEKGKSGKTGQPGL-EGERGPPGSRGERGQP 790 800 810 820 830 840 330 340 350 360 370 380 pF1KE2 VNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQ XP_011 GATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGEL 850 860 870 880 890 900 >-- initn: 1014 init1: 553 opt: 596 Z-score: 287.3 bits: 64.3 E(85289): 2.9e-09 Smith-Waterman score: 652; 41.2% identity (55.6% similar) in 277 aa overlap (95-343:1254-1528) 70 80 90 100 110 120 pF1KE2 PFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGE .::.: : :: :::: :: .: : :: XP_011 KGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGE 1230 1240 1250 1260 1270 1280 130 140 150 160 170 180 pF1KE2 LGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGE : :: : :::::. : :: : :: .:: :. : : : :..: : : :: : XP_011 KGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGP 1290 1300 1310 1320 1330 1340 190 200 210 220 230 pF1KE2 KGSRGEKGDLGPKGEKGFPG---FPGMLGQKGEMGPKGE------PGIAGHRGPTGRPGK :.:: : .::.: .:.:: ::.:: :.::: : ::. : :: :. :. XP_011 MGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGH 1350 1360 1370 1380 1390 1400 240 250 260 270 pF1KE2 ---------RGKQGQKGDSGVMGPPGKPGPSGQPGRPGP------PGPPP-AGQLIMGPK :. :.:::.:. : : :::.:.:: ::: :::: :: : : : XP_011 IGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPL--GQK 1410 1420 1430 1440 1450 1460 280 290 300 310 320 330 pF1KE2 GERGFPGPPG-RCLCGPTMNVNNPSYGESVYGPSSPR--VPVIFVVNNQEELERLNTQNA : .: :: : : ::. . :. ..: : ::: . : . : : . .. XP_011 GSKGSPGSMGPRGDTGPAGPPGPPGAPAELHGLRRRRRFVPVPLPVVEGGLEEVLASLTS 1470 1480 1490 1500 1510 1520 340 350 360 370 380 390 pF1KE2 IAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDD .... .: XP_011 LSLELEQLRRPPGTAERPGLVCHELHRNHPHLPDGEYWIDPNQGCARDSFRVFCNFTAGG 1530 1540 1550 1560 1570 1580 >-- initn: 539 init1: 539 opt: 596 Z-score: 287.3 bits: 64.3 E(85289): 2.9e-09 Smith-Waterman score: 680; 44.7% identity (58.7% similar) in 264 aa overlap (96-317:928-1181) 70 80 90 100 110 120 pF1KE2 FFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPG---LPGKTGPKGEK : :: ::::: :::: ::: : .: : XP_011 GQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAK 900 910 920 930 940 950 130 140 150 160 170 pF1KE2 GELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGD------LGMMGLPGSRGPMG-- :::: :: :. :: :. :.::: : :: :: : ::: .: : :: :::.: XP_011 GELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPA 960 970 980 990 1000 1010 180 190 200 210 220 pF1KE2 ----------SKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIA :.: : :.::::::.: :: :. :.:: : :: : ::.:: : XP_011 GGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEG-- 1020 1030 1040 1050 1060 1070 230 240 250 260 270 pF1KE2 GHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGP--------PPA--GQL .: .: ::..:..:.:::.: :::.:: : :.::::: ::. :: XP_011 -DKGDVGAPGHKGSKGDKGDAG---PPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQK 1080 1090 1100 1110 1120 1130 280 290 300 310 320 pF1KE2 ----------IMGPKGERGFPGPPGRCLCGPTMNVNNPSYG-ESVYGPSSPRVPVIFVVN ..:: : .:.:::::. : . .:. :.: ... :: .:. : XP_011 GDDGVRGFVGVIGPPGLQGLPGPPGE--KGEVGDVG--SMGPHGAPGPRGPQGPTGSEGT 1140 1150 1160 1170 1180 330 340 350 360 370 380 pF1KE2 NQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPG XP_011 PGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGP 1190 1200 1210 1220 1230 1240 >-- initn: 1046 init1: 387 opt: 467 Z-score: 229.3 bits: 53.6 E(85289): 4.9e-06 Smith-Waterman score: 500; 41.9% identity (55.2% similar) in 203 aa overlap (92-273:393-593) 70 80 90 100 110 120 pF1KE2 FPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGE : : : :: :: ::::.:: :: : XP_011 TQFQIFPGAGEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPGFPGDPGPPGP 370 380 390 400 410 420 130 140 150 160 pF1KE2 KGELGRPGRKGRPGPPG-VPGMPGPIGWPGPEGPR-----------------GEKGDLGM : : :: : :::: : :: .. . .:: . :: : XP_011 AGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGP 430 440 450 460 470 480 170 180 190 200 210 220 pF1KE2 MGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGI .:: : ::.: :.:: .::.:..: .: : .: .: :: : .:. : : .: :: XP_011 VGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGD 490 500 510 520 530 540 230 240 250 260 270 280 pF1KE2 AG---HRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKG .: :: : :: :..::.:: : .: :: :: .:. : ::::: .:: XP_011 TGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGP--TGQAGEPGPR 550 560 570 580 590 600 290 300 310 320 330 340 pF1KE2 ERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFR XP_011 GLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTP 610 620 630 640 650 660 >>NP_056534 (OMIM: 120216) collagen alpha-3(V) chain pre (1745 aa) initn: 609 init1: 609 opt: 684 Z-score: 326.8 bits: 71.7 E(85289): 1.8e-11 Smith-Waterman score: 695; 44.3% identity (60.6% similar) in 264 aa overlap (56-315:598-838) 30 40 50 60 70 80 pF1KE2 FINSVLPISAALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSPLLSPDMKNLMLE : : :. : ::. .: : . .. NP_056 FGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGP---RGSPGPTGRPGVTGI--- 570 580 590 600 610 620 90 100 110 120 130 140 pF1KE2 LETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGELGRPGRKGRPGPPGVPGMPG- . .: .:..: :: ::: : : :. : : .: .: ::.:: :: ::.::.:: NP_056 ---DGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGS 630 640 650 660 670 150 160 170 180 190 200 pF1KE2 --PIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGF :.: :: ::: :::: .: ::: :: :::: :: ::. :..: : ::::: NP_056 DGPLGHPGHEGPTGEKG---AQGPPGSAGP---PGYPGPRGVKGTSGNRGLQGEKGEKGE 680 690 700 710 720 730 210 220 230 240 250 260 pF1KE2 PGFPGMLGQKGEMGPKGEPGIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGR ::::. ::..: ::. : : :: :. : .: .:: :..: ::::. : .:. : NP_056 DGFPGF---KGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGV 740 750 760 770 780 270 280 290 300 310 320 pF1KE2 PGPPGPPPAGQLIMGPKGERGFPGPPGRC-LCGPTMNVNNPSYGESVYGPSSPRVPVIFV :: :: : :. :::: ::::: : : . ....:. :. :: . : NP_056 PGLPGYP--GR--PGPKGSIGFPGPLGPIGEKGKSGKTGQPGL-EGERGPPGSRGERGQP 790 800 810 820 830 840 330 340 350 360 370 380 pF1KE2 VNNQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQ NP_056 GATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGEL 850 860 870 880 890 900 >-- initn: 1014 init1: 553 opt: 596 Z-score: 287.3 bits: 64.3 E(85289): 2.9e-09 Smith-Waterman score: 652; 41.2% identity (55.6% similar) in 277 aa overlap (95-343:1255-1529) 70 80 90 100 110 120 pF1KE2 PFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGE .::.: : :: :::: :: .: : :: NP_056 KGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGE 1230 1240 1250 1260 1270 1280 130 140 150 160 170 180 pF1KE2 LGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSRGPMGSKGYPGSRGE : :: : :::::. : :: : :: .:: :. : : : :..: : : :: : NP_056 KGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGP 1290 1300 1310 1320 1330 1340 190 200 210 220 230 pF1KE2 KGSRGEKGDLGPKGEKGFPG---FPGMLGQKGEMGPKGE------PGIAGHRGPTGRPGK :.:: : .::.: .:.:: ::.:: :.::: : ::. : :: :. :. NP_056 MGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGH 1350 1360 1370 1380 1390 1400 240 250 260 270 pF1KE2 ---------RGKQGQKGDSGVMGPPGKPGPSGQPGRPGP------PGPPP-AGQLIMGPK :. :.:::.:. : : :::.:.:: ::: :::: :: : : : NP_056 IGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPL--GQK 1410 1420 1430 1440 1450 1460 280 290 300 310 320 330 pF1KE2 GERGFPGPPG-RCLCGPTMNVNNPSYGESVYGPSSPR--VPVIFVVNNQEELERLNTQNA : .: :: : : ::. . :. ..: : ::: . : . : : . .. NP_056 GSKGSPGSMGPRGDTGPAGPPGPPGAPAELHGLRRRRRFVPVPLPVVEGGLEEVLASLTS 1470 1480 1490 1500 1510 1520 340 350 360 370 380 390 pF1KE2 IAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDD .... .: NP_056 LSLELEQLRRPPGTAERPGLVCHELHRNHPHLPDGEYWIDPNQGCARDSFRVFCNFTAGG 1530 1540 1550 1560 1570 1580 >-- initn: 539 init1: 539 opt: 596 Z-score: 287.3 bits: 64.3 E(85289): 2.9e-09 Smith-Waterman score: 680; 44.7% identity (58.7% similar) in 264 aa overlap (96-317:929-1182) 70 80 90 100 110 120 pF1KE2 FFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPG---LPGKTGPKGEK : :: ::::: :::: ::: : .: : NP_056 GQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAK 900 910 920 930 940 950 130 140 150 160 170 pF1KE2 GELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGD------LGMMGLPGSRGPMG-- :::: :: :. :: :. :.::: : :: :: : ::: .: : :: :::.: NP_056 GELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPA 960 970 980 990 1000 1010 180 190 200 210 220 pF1KE2 ----------SKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGIA :.: : :.::::::.: :: :. :.:: : :: : ::.:: : NP_056 GGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEG-- 1020 1030 1040 1050 1060 1070 230 240 250 260 270 pF1KE2 GHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGP--------PPA--GQL .: .: ::..:..:.:::.: :::.:: : :.::::: ::. :: NP_056 -DKGDVGAPGHKGSKGDKGDAG---PPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQK 1080 1090 1100 1110 1120 1130 280 290 300 310 320 pF1KE2 ----------IMGPKGERGFPGPPGRCLCGPTMNVNNPSYG-ESVYGPSSPRVPVIFVVN ..:: : .:.:::::. : . .:. :.: ... :: .:. : NP_056 GDDGVRGFVGVIGPPGLQGLPGPPGE--KGEVGDVG--SMGPHGAPGPRGPQGPTGSEGT 1140 1150 1160 1170 1180 330 340 350 360 370 380 pF1KE2 NQEELERLNTQNAIAFRRDQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPG NP_056 PGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGP 1190 1200 1210 1220 1230 1240 >-- initn: 1046 init1: 387 opt: 467 Z-score: 229.3 bits: 53.6 E(85289): 4.9e-06 Smith-Waterman score: 500; 41.9% identity (55.2% similar) in 203 aa overlap (92-273:394-594) 70 80 90 100 110 120 pF1KE2 FPPPFFRGGRSPLLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQGPPGLPGKTGPKGE : : : :: :: ::::.:: :: : NP_056 TQFQIFPGAGEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPGFPGDPGPPGP 370 380 390 400 410 420 130 140 150 160 pF1KE2 KGELGRPGRKGRPGPPG-VPGMPGPIGWPGPEGPR-----------------GEKGDLGM : : :: : :::: : :: .. . .:: . :: : NP_056 AGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGP 430 440 450 460 470 480 170 180 190 200 210 220 pF1KE2 MGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEPGI .:: : ::.: :.:: .::.:..: .: : .: .: :: : .:. : : .: :: NP_056 VGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGD 490 500 510 520 530 540 230 240 250 260 270 280 pF1KE2 AG---HRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKG .: :: : :: :..::.:: : .: :: :: .:. : ::::: .:: NP_056 TGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGP--TGQAGEPGPR 550 560 570 580 590 600 290 300 310 320 330 340 pF1KE2 ERGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFR NP_056 GLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTP 610 620 630 640 650 660 455 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:56:25 2016 done: Mon Nov 7 19:56:27 2016 Total Scan time: 8.700 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]