FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1708, 214 aa 1>>>pF1KE1708 214 - 214 aa - 214 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0469+/-0.000326; mu= 14.9046+/- 0.020 mean_var=61.8255+/-12.140, 0's: 0 Z-trim(115.3): 34 B-trim: 11 in 1/52 Lambda= 0.163114 statistics sampled from 25637 (25670) to 25637 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.301), width: 16 Scan time: 6.600 The best scores are: opt bits E(85289) NP_037372 (OMIM: 614553) hemK methyltransferase fa ( 214) 1403 338.3 5.6e-93 NP_877426 (OMIM: 614553) hemK methyltransferase fa ( 186) 690 170.5 1.6e-42 >>NP_037372 (OMIM: 614553) hemK methyltransferase family (214 aa) initn: 1403 init1: 1403 opt: 1403 Z-score: 1790.3 bits: 338.3 E(85289): 5.6e-93 Smith-Waterman score: 1403; 100.0% identity (100.0% similar) in 214 aa overlap (1-214:1-214) 10 20 30 40 50 60 pF1KE1 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_037 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_037 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 FNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_037 FNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE 130 140 150 160 170 180 190 200 210 pF1KE1 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS :::::::::::::::::::::::::::::::::: NP_037 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 190 200 210 >>NP_877426 (OMIM: 614553) hemK methyltransferase family (186 aa) initn: 690 init1: 690 opt: 690 Z-score: 884.4 bits: 170.5 E(85289): 1.6e-42 Smith-Waterman score: 1150; 86.9% identity (86.9% similar) in 214 aa overlap (1-214:1-186) 10 20 30 40 50 60 pF1KE1 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_877 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLV ::::::::::::::::::::::::::::::::::::::::::::: NP_877 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLV--------------- 70 80 90 100 130 140 150 160 170 180 pF1KE1 FNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE ::::::::::::::::::::::::::::::::::::::::::::::: NP_877 -------------GSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE 110 120 130 140 150 190 200 210 pF1KE1 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS :::::::::::::::::::::::::::::::::: NP_877 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 160 170 180 214 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:02:00 2016 done: Sun Nov 6 12:02:01 2016 Total Scan time: 6.600 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]