FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1708, 214 aa 1>>>pF1KE1708 214 - 214 aa - 214 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2798+/-0.000706; mu= 13.5000+/- 0.042 mean_var=59.2249+/-12.007, 0's: 0 Z-trim(108.5): 18 B-trim: 554 in 1/48 Lambda= 0.166656 statistics sampled from 10210 (10222) to 10210 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.314), width: 16 Scan time: 2.240 The best scores are: opt bits E(32554) CCDS33526.1 N6AMT1 gene_id:29104|Hs108|chr21 ( 214) 1403 345.3 1.7e-95 CCDS33525.1 N6AMT1 gene_id:29104|Hs108|chr21 ( 186) 690 173.8 6.2e-44 >>CCDS33526.1 N6AMT1 gene_id:29104|Hs108|chr21 (214 aa) initn: 1403 init1: 1403 opt: 1403 Z-score: 1827.8 bits: 345.3 E(32554): 1.7e-95 Smith-Waterman score: 1403; 100.0% identity (100.0% similar) in 214 aa overlap (1-214:1-214) 10 20 30 40 50 60 pF1KE1 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 FNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 FNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE 130 140 150 160 170 180 190 200 210 pF1KE1 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS :::::::::::::::::::::::::::::::::: CCDS33 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 190 200 210 >>CCDS33525.1 N6AMT1 gene_id:29104|Hs108|chr21 (186 aa) initn: 690 init1: 690 opt: 690 Z-score: 902.2 bits: 173.8 E(32554): 6.2e-44 Smith-Waterman score: 1150; 86.9% identity (86.9% similar) in 214 aa overlap (1-214:1-186) 10 20 30 40 50 60 pF1KE1 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MAGENFATPFHGHVGRGAFSDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGSGSGVVS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLV ::::::::::::::::::::::::::::::::::::::::::::: CCDS33 AFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLV--------------- 70 80 90 100 130 140 150 160 170 180 pF1KE1 FNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE ::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 -------------GSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPE 110 120 130 140 150 190 200 210 pF1KE1 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS :::::::::::::::::::::::::::::::::: CCDS33 EILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 160 170 180 214 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:02:00 2016 done: Sun Nov 6 12:02:00 2016 Total Scan time: 2.240 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]