FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5623, 474 aa 1>>>pF1KE5623 474 - 474 aa - 474 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5387+/-0.00104; mu= 17.3578+/- 0.063 mean_var=101.5623+/-21.860, 0's: 0 Z-trim(105.7): 125 B-trim: 427 in 1/52 Lambda= 0.127265 statistics sampled from 8418 (8568) to 8418 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.263), width: 16 Scan time: 2.590 The best scores are: opt bits E(32554) CCDS33335.1 RBM45 gene_id:129831|Hs108|chr2 ( 474) 3156 590.5 1.2e-168 >>CCDS33335.1 RBM45 gene_id:129831|Hs108|chr2 (474 aa) initn: 3156 init1: 3156 opt: 3156 Z-score: 3141.0 bits: 590.5 E(32554): 1.2e-168 Smith-Waterman score: 3156; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474) 10 20 30 40 50 60 pF1KE5 MDEAGSSASGGGFRPGVDSLDEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MDEAGSSASGGGFRPGVDSLDEPPNSRIFLVISKYTPESVLRERFSPFGDIQDIWVVRDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 HTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHRDVEDEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 HTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVFIAQSRSSGSHRDVEDEEL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 TRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 CDRSFRAILAEPKNKASESSEQDYYSNMRQEALGHEPRVNMFPFEQQSEFSSFDKNDSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 CDRSFRAILAEPKNKASESSEQDYYSNMRQEALGHEPRVNMFPFEQQSEFSSFDKNDSRG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QEAISKRLSVVSRVPFTEEQLFSIFDIVPGLEYCEVQRDPYSNYGHGVVQYFNVASAIYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QEAISKRLSVVSRVPFTEEQLFSIFDIVPGLEYCEVQRDPYSNYGHGVVQYFNVASAIYA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 KYKLHGFQYPPGNRIGVSFIDDGSNATDLLRKMATQMVAAQLASMVWNNPSQQQFMQFGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KYKLHGFQYPPGNRIGVSFIDDGSNATDLLRKMATQMVAAQLASMVWNNPSQQQFMQFGG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 SSGSQLPQIQTDVVLPSCKKKAPAETPVKERLFIVFNPHPLPLDVLEDIFCRFGNLIEVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SSGSQLPQIQTDVVLPSCKKKAPAETPVKERLFIVFNPHPLPLDVLEDIFCRFGNLIEVY 370 380 390 400 410 420 430 440 450 460 470 pF1KE5 LVSGKNVGYAKYADRISANDAIATLHGKILNGVRLKVMLADSPREESNKRQRTY :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LVSGKNVGYAKYADRISANDAIATLHGKILNGVRLKVMLADSPREESNKRQRTY 430 440 450 460 470 474 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:15:59 2016 done: Tue Nov 8 05:15:59 2016 Total Scan time: 2.590 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]