FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3689, 685 aa 1>>>pF1KE3689 685 - 685 aa - 685 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2920+/-0.00121; mu= 15.6960+/- 0.071 mean_var=124.2413+/-26.721, 0's: 0 Z-trim(105.4): 94 B-trim: 363 in 1/50 Lambda= 0.115064 statistics sampled from 8325 (8416) to 8325 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.259), width: 16 Scan time: 3.520 The best scores are: opt bits E(32554) CCDS33237.1 RNF103 gene_id:7844|Hs108|chr2 ( 685) 4731 797.6 0 >>CCDS33237.1 RNF103 gene_id:7844|Hs108|chr2 (685 aa) initn: 4731 init1: 4731 opt: 4731 Z-score: 4254.0 bits: 797.6 E(32554): 0 Smith-Waterman score: 4731; 100.0% identity (100.0% similar) in 685 aa overlap (1-685:1-685) 10 20 30 40 50 60 pF1KE3 MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 VQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 STSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKSDQYWLKIYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 STSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKSDQYWLKIYLF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDIGIYNMPSYILRTPEGIYRYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDIGIYNMPSYILRTPEGIYRYG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 NHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 LSTYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LSTYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVES 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 DWDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DWDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 SENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 NEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 NEDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCP 610 620 630 640 650 660 670 680 pF1KE3 VCRWPSYKKKQPYAQHQPLSNDVPS ::::::::::::::::::::::::: CCDS33 VCRWPSYKKKQPYAQHQPLSNDVPS 670 680 685 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:32:20 2016 done: Sat Nov 5 23:32:20 2016 Total Scan time: 3.520 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]