FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0714, 411 aa 1>>>pF1KE0714 411 - 411 aa - 411 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.8439+/-0.000578; mu= -16.9059+/- 0.036 mean_var=852.2665+/-178.772, 0's: 0 Z-trim(123.0): 419 B-trim: 699 in 1/60 Lambda= 0.043933 statistics sampled from 41490 (41990) to 41490 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.492), width: 16 Scan time: 7.370 The best scores are: opt bits E(85289) NP_940881 (OMIM: 611166) tetra-peptide repeat home ( 411) 3021 206.5 1e-52 XP_016857330 (OMIM: 606373,616193) PREDICTED: form (1102) 555 50.7 2e-05 XP_016857329 (OMIM: 606373,616193) PREDICTED: form (1102) 555 50.7 2e-05 XP_016857328 (OMIM: 606373,616193) PREDICTED: form (1159) 555 50.8 2.1e-05 XP_011542539 (OMIM: 606373,616193) PREDICTED: form (1360) 555 50.9 2.3e-05 XP_016857327 (OMIM: 606373,616193) PREDICTED: form (1384) 555 50.9 2.4e-05 XP_016857326 (OMIM: 606373,616193) PREDICTED: form (1417) 555 50.9 2.4e-05 NP_064450 (OMIM: 606373,616193) formin-2 isoform 2 (1722) 555 51.0 2.7e-05 NP_001292353 (OMIM: 606373,616193) formin-2 isofor (1726) 555 51.0 2.7e-05 XP_016884752 (OMIM: 301050,303630) PREDICTED: coll (1136) 478 45.9 0.00061 XP_016867496 (OMIM: 604918,608027) PREDICTED: prot (2561) 488 47.0 0.00065 XP_016884751 (OMIM: 301050,303630) PREDICTED: coll (1289) 478 46.0 0.00066 XP_016884750 (OMIM: 301050,303630) PREDICTED: coll (1330) 478 46.0 0.00068 XP_016867495 (OMIM: 604918,608027) PREDICTED: prot (2838) 488 47.0 0.00069 NP_000486 (OMIM: 301050,303630) collagen alpha-5(I (1685) 478 46.1 0.00078 XP_016884749 (OMIM: 301050,303630) PREDICTED: coll (1690) 478 46.1 0.00078 NP_203699 (OMIM: 301050,303630) collagen alpha-5(I (1691) 478 46.1 0.00078 XP_016884748 (OMIM: 301050,303630) PREDICTED: coll (1693) 478 46.1 0.00078 XP_011529151 (OMIM: 301050,303630) PREDICTED: coll (1696) 478 46.1 0.00078 NP_055325 (OMIM: 604918,608027) protein piccolo is (4935) 488 47.3 0.00097 NP_149015 (OMIM: 604918,608027) protein piccolo is (5142) 488 47.4 0.00099 XP_011508874 (OMIM: 120131,203780) PREDICTED: coll (1132) 448 44.0 0.0023 XP_005262513 (OMIM: 300688) PREDICTED: BCL-6 corep (1655) 453 44.5 0.0023 XP_006724842 (OMIM: 300688) PREDICTED: BCL-6 corep (1687) 453 44.5 0.0023 NP_068765 (OMIM: 300688) BCL-6 corepressor-like pr (1711) 453 44.5 0.0024 NP_001171701 (OMIM: 300688) BCL-6 corepressor-like (1785) 453 44.6 0.0024 XP_005262511 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_006724839 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_006724840 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_005262510 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_016885211 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_005262509 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_016885210 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_005262512 (OMIM: 300688) PREDICTED: BCL-6 corep (1785) 453 44.6 0.0024 XP_011508860 (OMIM: 120131,203780) PREDICTED: coll (1654) 448 44.2 0.0029 XP_011533734 (OMIM: 120110,156500) PREDICTED: coll ( 680) 429 42.5 0.0039 XP_011533735 (OMIM: 120110,156500) PREDICTED: coll ( 680) 429 42.5 0.0039 XP_016865737 (OMIM: 120110,156500) PREDICTED: coll ( 680) 429 42.5 0.0039 NP_000484 (OMIM: 120110,156500) collagen alpha-1(X ( 680) 429 42.5 0.0039 XP_006715396 (OMIM: 120110,156500) PREDICTED: coll ( 680) 429 42.5 0.0039 XP_016865738 (OMIM: 120110,156500) PREDICTED: coll ( 680) 429 42.5 0.0039 NP_001281276 (OMIM: 120252,136800,609140) collagen ( 638) 428 42.4 0.0039 NP_005193 (OMIM: 120252,136800,609140) collagen al ( 703) 428 42.4 0.0041 XP_005270534 (OMIM: 120252,136800,609140) PREDICTE ( 780) 428 42.5 0.0044 NP_000485 (OMIM: 113811,122400,226650) collagen al (1497) 437 43.4 0.0044 NP_008938 (OMIM: 604979) cleavage and polyadenylat ( 551) 423 42.0 0.0044 XP_005268647 (OMIM: 604979) PREDICTED: cleavage an ( 552) 423 42.0 0.0044 XP_011536691 (OMIM: 601234) PREDICTED: nascent pol (2078) 435 43.5 0.0059 XP_006719477 (OMIM: 601234) PREDICTED: nascent pol (2082) 435 43.5 0.0059 XP_006719475 (OMIM: 601234) PREDICTED: nascent pol (2082) 435 43.5 0.0059 >>NP_940881 (OMIM: 611166) tetra-peptide repeat homeobox (411 aa) initn: 3021 init1: 3021 opt: 3021 Z-score: 1067.6 bits: 206.5 E(85289): 1e-52 Smith-Waterman score: 3021; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411) 10 20 30 40 50 60 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 GILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 IPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 IPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 GPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 GPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 GPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 GPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 GLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 GLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPL 310 320 330 340 350 360 370 380 390 400 410 pF1KE0 DPLEGSSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 DPLEGSSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL 370 380 390 400 410 >>XP_016857330 (OMIM: 606373,616193) PREDICTED: formin-2 (1102 aa) initn: 497 init1: 307 opt: 555 Z-score: 218.2 bits: 50.7 E(85289): 2e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:260-632) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : XP_016 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 230 240 250 260 270 280 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: XP_016 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 290 300 310 320 330 340 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : XP_016 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 350 360 370 380 390 400 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. XP_016 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 410 420 430 440 450 460 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : XP_016 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 470 480 490 500 510 520 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : XP_016 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 530 540 550 560 570 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : XP_016 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 580 590 600 610 620 630 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: XP_016 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 640 650 660 670 680 690 >>XP_016857329 (OMIM: 606373,616193) PREDICTED: formin-2 (1102 aa) initn: 497 init1: 307 opt: 555 Z-score: 218.2 bits: 50.7 E(85289): 2e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:260-632) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : XP_016 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 230 240 250 260 270 280 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: XP_016 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 290 300 310 320 330 340 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : XP_016 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 350 360 370 380 390 400 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. XP_016 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 410 420 430 440 450 460 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : XP_016 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 470 480 490 500 510 520 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : XP_016 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 530 540 550 560 570 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : XP_016 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 580 590 600 610 620 630 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: XP_016 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 640 650 660 670 680 690 >>XP_016857328 (OMIM: 606373,616193) PREDICTED: formin-2 (1159 aa) initn: 497 init1: 307 opt: 555 Z-score: 218.0 bits: 50.8 E(85289): 2.1e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:317-689) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : XP_016 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 290 300 310 320 330 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: XP_016 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 340 350 360 370 380 390 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : XP_016 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 400 410 420 430 440 450 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. XP_016 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 460 470 480 490 500 510 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : XP_016 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 520 530 540 550 560 570 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : XP_016 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 580 590 600 610 620 630 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : XP_016 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 640 650 660 670 680 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: XP_016 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 690 700 710 720 730 740 >>XP_011542539 (OMIM: 606373,616193) PREDICTED: formin-2 (1360 aa) initn: 307 init1: 307 opt: 555 Z-score: 217.2 bits: 50.9 E(85289): 2.3e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:884-1256) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : XP_011 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 860 870 880 890 900 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: XP_011 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 910 920 930 940 950 960 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : XP_011 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 970 980 990 1000 1010 1020 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. XP_011 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 1030 1040 1050 1060 1070 1080 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : XP_011 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1090 1100 1110 1120 1130 1140 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : XP_011 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 1150 1160 1170 1180 1190 1200 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : XP_011 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 1210 1220 1230 1240 1250 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: XP_011 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 1260 1270 1280 1290 1300 1310 >>XP_016857327 (OMIM: 606373,616193) PREDICTED: formin-2 (1384 aa) initn: 307 init1: 307 opt: 555 Z-score: 217.1 bits: 50.9 E(85289): 2.4e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:884-1256) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : XP_016 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 860 870 880 890 900 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: XP_016 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 910 920 930 940 950 960 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : XP_016 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 970 980 990 1000 1010 1020 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. XP_016 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 1030 1040 1050 1060 1070 1080 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : XP_016 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1090 1100 1110 1120 1130 1140 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : XP_016 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 1150 1160 1170 1180 1190 1200 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : XP_016 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 1210 1220 1230 1240 1250 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: XP_016 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 1260 1270 1280 1290 1300 1310 >>XP_016857326 (OMIM: 606373,616193) PREDICTED: formin-2 (1417 aa) initn: 307 init1: 307 opt: 555 Z-score: 217.0 bits: 50.9 E(85289): 2.4e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:884-1256) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : XP_016 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 860 870 880 890 900 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: XP_016 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 910 920 930 940 950 960 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : XP_016 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 970 980 990 1000 1010 1020 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. XP_016 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 1030 1040 1050 1060 1070 1080 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : XP_016 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1090 1100 1110 1120 1130 1140 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : XP_016 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 1150 1160 1170 1180 1190 1200 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : XP_016 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 1210 1220 1230 1240 1250 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: XP_016 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 1260 1270 1280 1290 1300 1310 >>NP_064450 (OMIM: 606373,616193) formin-2 isoform 2 [Ho (1722 aa) initn: 307 init1: 307 opt: 555 Z-score: 216.1 bits: 51.0 E(85289): 2.7e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:880-1252) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : NP_064 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 850 860 870 880 890 900 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: NP_064 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 910 920 930 940 950 960 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : NP_064 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 970 980 990 1000 1010 1020 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. NP_064 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 1030 1040 1050 1060 1070 1080 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : NP_064 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1090 1100 1110 1120 1130 1140 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : NP_064 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 1150 1160 1170 1180 1190 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : NP_064 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 1200 1210 1220 1230 1240 1250 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: NP_064 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 1260 1270 1280 1290 1300 1310 >>NP_001292353 (OMIM: 606373,616193) formin-2 isoform 1 (1726 aa) initn: 307 init1: 307 opt: 555 Z-score: 216.1 bits: 51.0 E(85289): 2.7e-05 Smith-Waterman score: 644; 37.0% identity (48.7% similar) in 392 aa overlap (30-367:884-1256) 10 20 30 40 50 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGP : .::. ..: .: :.. :: : NP_001 KNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGM------TVPTLP--STAIPQPPP 860 870 880 890 900 60 70 80 90 100 110 pF1KE0 ---SGILPAAEPTICSLH----QAWGGPGCRAQKGIPAALSPGPGPIP-APIPGPAQIPG . .:: : . . : : .:.: : : :.: : :: : .:: NP_001 LQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPG 910 920 930 940 950 960 120 130 140 150 pF1KE0 ---PLPGSIPGP-IPGPAQIPS---PIPAPIPGP-ISGPVQIPG---PFRGPIPGP-ISG ::: .:: :: : .:. : : :.:: : : .:: : :.:: : NP_001 AGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 970 980 990 1000 1010 1020 160 170 180 190 200 pF1KE0 PAPIPG---PISGPFSG---PNPGPIPG---PNPGPIPG---PISGPIPGPISVPIPGPI : :.:: : :. : : : :.:: : : :.:: : :.:: ..: : :. NP_001 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPPPPPL 1030 1040 1050 1060 1070 1080 210 220 230 240 250 pF1KE0 PG---PISGPISG---PNPGPIPG---PIPGPISG---PNPGPIPG---PISGPNPGL-I :: : :. : : : :.:: : : :. : : : :.:: : : :: : NP_001 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1090 1100 1110 1120 1130 1140 260 270 280 290 300 pF1KE0 PGPIPGPISG---PGPIIGP-IPSPAQIPGPGRLQGPGPILSPGR-MRSPGSLPGLAPIL : : : : : : :. : :: : .:: : . : :. :: . : :::.. : NP_001 PPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG-IPPPPPL--PGVGIPPPPPLPGVG-IP 1150 1160 1170 1180 1190 1200 310 320 330 340 350 360 pF1KE0 GPGSGPGSG-SVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG : ::.: : :.:: : ::::: : : .. .: :.: :: : : NP_001 PPPPLPGAGIPPPPPLPGMGIPPAPAP--PLPPPGTG-IPPPPLLPVSGP---PLLPQVG 1210 1220 1230 1240 1250 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL :: NP_001 SSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRPMKPLYWTRIQLHSKRDSS 1260 1270 1280 1290 1300 1310 >>XP_016884752 (OMIM: 301050,303630) PREDICTED: collagen (1136 aa) initn: 254 init1: 144 opt: 478 Z-score: 191.7 bits: 45.9 E(85289): 0.00061 Smith-Waterman score: 538; 35.7% identity (51.2% similar) in 434 aa overlap (35-406:3-408) 10 20 30 40 50 60 pF1KE0 REQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGR-GARAAPLVPAASASAPQRGPSGIL :..:. :. .:: .:. .. : : :. XP_016 MKGDKGELGSPGAPGLPGLPGTPGQDGLPGLP 10 20 30 70 80 90 100 110 pF1KE0 -PAAEPTICSLHQAWGGPGCRAQKGIPAALSP-GP---GPIPAP-----IPGPAQIPGPL : .:: ... : :: . :.:. ..: :: :: :.: : : : :: XP_016 GPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGP-PGPVGEKGIQGVAGNPGQ- 40 50 60 70 80 90 120 130 140 150 160 pF1KE0 PGSIPGPIPGPAQ-IPSPIPAPIPG-PI-SGPVQIPG----PFRGPIPG-PISGPAP-IP :: :::: :.: : .: .:: : .: : .:: : . .:: : : : :: XP_016 PG-IPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIP 100 110 120 130 140 170 180 190 200 210 pF1KE0 G-PISGPFSGPNPGP-IPGPNPGP-IPGPIS--GP-----IPGPISVP---IPGPIPGPI : . :: ::. : :::: .: :: :. :: .::: . : .::: ::: XP_016 GIGLPGP-PGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGP-PGPP 150 160 170 180 190 200 220 230 240 250 pF1KE0 SGP----ISGPN-----PGPIPGP--------IPGPISGPNPGPIPGPISGPN-PGL-IP . : ::. ::: ::: .::: . .:. :::.. :. ::. . XP_016 GLPGFKGALGPKGDRGFPGP-PGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQ 210 220 230 240 250 260 260 270 280 290 300 pF1KE0 GPIPGPISGPGPIIGP----IPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGP :: ::: . :::: : ::. ::: :. ::: ::. ::: .:: :: :: XP_016 GP-PGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGP---PGERGSPG-IPG-AP--GP 270 280 290 300 310 310 320 330 340 350 360 pF1KE0 GSGPGSGSVP--APIPG-PGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPLDPLEG . ::: ..: : : ::. . . : .: . .: . : : : :.: XP_016 IGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPG----LKGDDGLQG 320 330 340 350 360 370 370 380 390 400 410 pF1KE0 SSVSTMTSQYQEG-DDSMGKKHSGSQPQEEG--GSVNENHSGPRLLLDL : : :.: : ..: : : .. : : . XP_016 ----------QPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGVSG 380 390 400 410 420 XP_016 PKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQG 430 440 450 460 470 480 411 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:39:44 2016 done: Tue Nov 8 04:39:45 2016 Total Scan time: 7.370 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]