FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0714, 411 aa 1>>>pF1KE0714 411 - 411 aa - 411 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.2156+/-0.00134; mu= -1.8921+/- 0.081 mean_var=714.3061+/-147.304, 0's: 0 Z-trim(115.2): 199 B-trim: 0 in 0/52 Lambda= 0.047988 statistics sampled from 15602 (15788) to 15602 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.485), width: 16 Scan time: 3.390 The best scores are: opt bits E(32554) CCDS33066.1 TPRX1 gene_id:284355|Hs108|chr19 ( 411) 3021 223.9 2.3e-58 >>CCDS33066.1 TPRX1 gene_id:284355|Hs108|chr19 (411 aa) initn: 3021 init1: 3021 opt: 3021 Z-score: 1161.4 bits: 223.9 E(32554): 2.3e-58 Smith-Waterman score: 3021; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411) 10 20 30 40 50 60 pF1KE0 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MLSLREQQLQVWFKNRRAKLARERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GILPAAEPTICSLHQAWGGPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 IPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 IPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 GPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 GPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 GLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GLAPILGPGSGPGSGSVPAPIPGPGSLPAPAPLWPQSPDASDFLPDTQLFPHFTELLLPL 310 320 330 340 350 360 370 380 390 400 410 pF1KE0 DPLEGSSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DPLEGSSVSTMTSQYQEGDDSMGKKHSGSQPQEEGGSVNENHSGPRLLLDL 370 380 390 400 410 411 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:39:43 2016 done: Tue Nov 8 04:39:44 2016 Total Scan time: 3.390 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]