Result of FASTA (ccds) for
pFN21AB9439
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9439, 463 aa
1>>>pF1KB9439 463 - 463 aa - 463 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.6926+/-0.000869; mu= 1.8167+/- 0.053
mean_var=317.5800+/-64.283, 0's: 0 Z-trim(117.2): 35 B-trim: 0 in 0/53
Lambda= 0.071969
statistics sampled from 17852 (17887) to 17852 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.822), E-opt: 0.2 (0.549), width: 16
Scan time: 3.860
The best scores are: opt bits E(32554)
CCDS33035.1 POU2F2 gene_id:5452|Hs108|chr19 ( 463) 3152 340.3 2.5e-93
CCDS58665.1 POU2F2 gene_id:5452|Hs108|chr19 ( 400) 2590 281.9 8.3e-76
CCDS56095.1 POU2F2 gene_id:5452|Hs108|chr19 ( 479) 2113 232.4 7.7e-61
CCDS56094.1 POU2F2 gene_id:5452|Hs108|chr19 ( 467) 2003 221.0 2.1e-57
CCDS55655.1 POU2F1 gene_id:5451|Hs108|chr1 ( 703) 1089 126.3 1e-28
CCDS55656.1 POU2F1 gene_id:5451|Hs108|chr1 ( 755) 1079 125.3 2.2e-28
CCDS1259.2 POU2F1 gene_id:5451|Hs108|chr1 ( 766) 1079 125.3 2.2e-28
CCDS58190.1 POU2F3 gene_id:25833|Hs108|chr11 ( 438) 939 110.5 3.6e-24
CCDS8431.1 POU2F3 gene_id:25833|Hs108|chr11 ( 436) 934 110.0 5.1e-24
>>CCDS33035.1 POU2F2 gene_id:5452|Hs108|chr19 (463 aa)
initn: 3152 init1: 3152 opt: 3152 Z-score: 1789.0 bits: 340.3 E(32554): 2.5e-93
Smith-Waterman score: 3152; 100.0% identity (100.0% similar) in 463 aa overlap (1-463:1-463)
10 20 30 40 50 60
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPPKCLEPPSHPEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPPKCLEPPSHPEE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 MVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVT
370 380 390 400 410 420
430 440 450 460
pF1KB9 PPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
:::::::::::::::::::::::::::::::::::::::::::
CCDS33 PPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
430 440 450 460
>>CCDS58665.1 POU2F2 gene_id:5452|Hs108|chr19 (400 aa)
initn: 2698 init1: 2590 opt: 2590 Z-score: 1474.4 bits: 281.9 E(32554): 8.3e-76
Smith-Waterman score: 2590; 99.5% identity (99.7% similar) in 386 aa overlap (1-386:1-386)
10 20 30 40 50 60
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPPKCLEPPSHPEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPPKCLEPPSHPEE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 LANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 MVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVT
:::::::::::::::::::::::. :
CCDS58 MVTPQGGAGTLPLSQASSSLSTTAQTPALKAATRLSACQA
370 380 390 400
>>CCDS56095.1 POU2F2 gene_id:5452|Hs108|chr19 (479 aa)
initn: 2019 init1: 2019 opt: 2113 Z-score: 1205.8 bits: 232.4 E(32554): 7.7e-61
Smith-Waterman score: 3110; 96.7% identity (96.7% similar) in 479 aa overlap (1-463:1-479)
10 20 30 40 50 60
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
70 80 90 100 110 120
130 140 150 160
pF1KB9 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQ-------------
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 ---PPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTT
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 ISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKK
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 RTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSA
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 APMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 APMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGG
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 GGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
430 440 450 460 470
>>CCDS56094.1 POU2F2 gene_id:5452|Hs108|chr19 (467 aa)
initn: 1909 init1: 1909 opt: 2003 Z-score: 1144.2 bits: 221.0 E(32554): 2.1e-57
Smith-Waterman score: 3000; 96.6% identity (96.6% similar) in 467 aa overlap (1-451:1-467)
10 20 30 40 50 60
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 TKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHL
70 80 90 100 110 120
130 140 150 160
pF1KB9 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQ-------------
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 ---PPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTT
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB9 ISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKK
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB9 RTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSA
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 APMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 APMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGG
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 GGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTG
430 440 450 460
>>CCDS55655.1 POU2F1 gene_id:5451|Hs108|chr1 (703 aa)
initn: 1213 init1: 556 opt: 1089 Z-score: 629.1 bits: 126.3 E(32554): 1e-28
Smith-Waterman score: 1287; 53.2% identity (72.4% similar) in 453 aa overlap (42-452:75-516)
20 30 40 50 60 70
pF1KB9 RMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGD
:: :: .... . ... :... :::
CCDS55 QTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTS-LQAAAQSLNVQSKSNEESGD
50 60 70 80 90 100
80 90 100 110 120
pF1KB9 SA-PAAPLPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQ-------LVLV-PGHHLQP
: :. : .: .::.::::.:.:..::.::: :::: .::: : .:::
CCDS55 SQQPSQPSQQPSVQAAIPQTQLMLAGGQITGDLQQLQQLQQQNLNLQQFVLVHPTTNLQP
110 120 130 140 150 160
130 140 150 160
pF1KB9 PAQFLLPQAQQSQPGLLPTPNLF-QLPQQTQGALLTSQPRAGLPTQP-------------
:::.. :. :.: ::: . ::. :::::.:. :: ::: : .::
CCDS55 -AQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQ
170 180 190 200 210 220
170 180 190 200 210 220
pF1KB9 --------PKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDF
:: .. :: :::::::::::::.::::::::::::::::::::::::::::
CCDS55 TLPQSQSTPKRIDTPSL-EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDF
230 240 250 260 270 280
230 240 250 260 270 280
pF1KB9 SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGR
:::::::::::::::::::::::::::::::::..: :::: ::. :.:: :..:: .:
CCDS55 SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSP--GIEGL-SR
290 300 310 320 330
290 300 310 320 330 340
pF1KB9 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRIN
:::::::::::.: ::::::: ::::::::: .::.::.:::::::::::::::::::::
CCDS55 RRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRIN
340 350 360 370 380 390
350 360 370 380 390
pF1KB9 P-----CSAAPM---LPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVG
: :..:. .::: . .. .: .:: ...: :: .: . :..::.:: ..:
CCDS55 PPSSGGTSSSPIKAIFPSPTSLVATTPSLVT-SSAATTLTVSPVLPLTSAAVTNLS-VTG
400 410 420 430 440 450
400 410 420 430 440
pF1KB9 TLHPSRTAGGGGGGGGAAPPLNSI---PSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPS
: . :... . ..::: .: ::..: : :.. ::. . ..:... . .:
CCDS55 T--SDTTSNNTATVISTAPPASSAVTSPSLSPSPSASA-STSEASSASETSTTQTTSTPL
460 470 480 490 500 510
450 460
pF1KB9 TGPGLWWNPAPYQP
..:
CCDS55 SSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGA
520 530 540 550 560 570
>>CCDS55656.1 POU2F1 gene_id:5451|Hs108|chr1 (755 aa)
initn: 1191 init1: 556 opt: 1079 Z-score: 623.1 bits: 125.3 E(32554): 2.2e-28
Smith-Waterman score: 1207; 48.3% identity (69.2% similar) in 487 aa overlap (20-452:92-568)
10 20 30 40
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKT
..: ..::.. ... :.:. . ..
CCDS55 HLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQI
70 80 90 100 110 120
50 60 70 80 90
pF1KB9 SPFSVSPTGPSTKIKAEDPSGDSAPAAPLPPQPAQPH------------LPQAQLMLTGS
. ....:. . .. . ... :: . .: : :..:. :.
CCDS55 TGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQP
130 140 150 160 170 180
100 110 120 130 140
pF1KB9 -QLAGDIQQLLQLQQ-------LVLV-PGHHLQPPAQFLLPQAQQSQPGLLPTPNLF-QL
:.: :.::: :::: .::: : .::: :::.. :. :.: ::: . ::. ::
CCDS55 IQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQP-AQFIISQTPQGQQGLLQAQNLLTQL
190 200 210 220 230 240
150 160 170 180
pF1KB9 PQQTQGALLTSQPRAGLPTQP---------------------PKCLEPPSHPEEPSDLEE
:::.:. :: ::: : .:: :: .. :: ::::::::
CCDS55 PQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSL-EEPSDLEE
250 260 270 280 290
190 200 210 220 230 240
pF1KB9 LEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
300 310 320 330 340 350
250 260 270 280 290 300
pF1KB9 KWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKP
:::::::..: :::: ::. :.:: :..:: .::::::::::::.: ::::::: ::::
CCDS55 KWLNDAENLSSDSSLSSPSALNSP--GIEGL-SRRRKKRTSIETNIRVALEKSFLENQKP
360 370 380 390 400 410
310 320 330 340 350
pF1KB9 TSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINP-----CSAAPM---LPSPGKPASYS
::::: .::.::.:::::::::::::::::::::: :..:. .::: . .. .
CCDS55 TSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATT
420 430 440 450 460 470
360 370 380 390 400 410
pF1KB9 PHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSI--
: .:: ...: :: .: . :..::.:: ..:: . :... . ..::: .:
CCDS55 PSLVT-SSAATTLTVSPVLPLTSAAVTNLS-VTGT--SDTTSNNTATVISTAPPASSAVT
480 490 500 510 520 530
420 430 440 450 460
pF1KB9 -PSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
::..: : :.. ::. . ..:... . .: ..:
CCDS55 SPSLSPSPSASA-STSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQG
540 550 560 570 580 590
CCDS55 AAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATI
600 610 620 630 640 650
>>CCDS1259.2 POU2F1 gene_id:5451|Hs108|chr1 (766 aa)
initn: 1191 init1: 556 opt: 1079 Z-score: 623.0 bits: 125.3 E(32554): 2.2e-28
Smith-Waterman score: 1207; 48.3% identity (69.2% similar) in 487 aa overlap (20-452:103-579)
10 20 30 40
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKT
..: ..::.. ... :.:. . ..
CCDS12 HLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQI
80 90 100 110 120 130
50 60 70 80 90
pF1KB9 SPFSVSPTGPSTKIKAEDPSGDSAPAAPLPPQPAQPH------------LPQAQLMLTGS
. ....:. . .. . ... :: . .: : :..:. :.
CCDS12 TGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQP
140 150 160 170 180 190
100 110 120 130 140
pF1KB9 -QLAGDIQQLLQLQQ-------LVLV-PGHHLQPPAQFLLPQAQQSQPGLLPTPNLF-QL
:.: :.::: :::: .::: : .::: :::.. :. :.: ::: . ::. ::
CCDS12 IQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQP-AQFIISQTPQGQQGLLQAQNLLTQL
200 210 220 230 240 250
150 160 170 180
pF1KB9 PQQTQGALLTSQPRAGLPTQP---------------------PKCLEPPSHPEEPSDLEE
:::.:. :: ::: : .:: :: .. :: ::::::::
CCDS12 PQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSL-EEPSDLEE
260 270 280 290 300 310
190 200 210 220 230 240
pF1KB9 LEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
320 330 340 350 360 370
250 260 270 280 290 300
pF1KB9 KWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKP
:::::::..: :::: ::. :.:: :..:: .::::::::::::.: ::::::: ::::
CCDS12 KWLNDAENLSSDSSLSSPSALNSP--GIEGL-SRRRKKRTSIETNIRVALEKSFLENQKP
380 390 400 410 420
310 320 330 340 350
pF1KB9 TSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINP-----CSAAPM---LPSPGKPASYS
::::: .::.::.:::::::::::::::::::::: :..:. .::: . .. .
CCDS12 TSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATT
430 440 450 460 470 480
360 370 380 390 400 410
pF1KB9 PHMVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSI--
: .:: ...: :: .: . :..::.:: ..:: . :... . ..::: .:
CCDS12 PSLVT-SSAATTLTVSPVLPLTSAAVTNLS-VTGT--SDTTSNNTATVISTAPPASSAVT
490 500 510 520 530 540
420 430 440 450 460
pF1KB9 -PSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
::..: : :.. ::. . ..:... . .: ..:
CCDS12 SPSLSPSPSASA-STSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQG
550 560 570 580 590 600
CCDS12 AAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATI
610 620 630 640 650 660
>>CCDS58190.1 POU2F3 gene_id:25833|Hs108|chr11 (438 aa)
initn: 701 init1: 525 opt: 939 Z-score: 547.5 bits: 110.5 E(32554): 3.6e-24
Smith-Waterman score: 1125; 52.5% identity (69.1% similar) in 408 aa overlap (62-439:46-434)
40 50 60 70 80 90
pF1KB9 DTERNGPDTNHQNPQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQ
.::.:: : :: . : .: :: :.
CCDS58 SGDVADSTDARSTLSQVEPGNDRNGLDFNRQIKTEDLS-DSLQQT-LSHRPC--HLSQGP
20 30 40 50 60 70
100 110 120 130 140
pF1KB9 LMLTGSQLAG-------DIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNL
:..:.:..: :. .: :::::::::: :: .:::: :.: .: :: :::
CCDS58 AMMSGNQMSGLNASPCQDMASLHPLQQLVLVPGH-LQSVSQFLLSQTQPGQQGL--QPNL
80 90 100 110 120
150 160 170 180
pF1KB9 FQLPQQTQGALLTSQPRAGLPTQ-------PPKCLEP----------PSH-P-----EEP
. .::: :..:: : :: .: : . ::: :.: : .::
CCDS58 LPFPQQ-QSGLLLPQTGPGLASQAFGHPGLPGSSLEPHLEASQHLPVPKHLPSSGGADEP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKL
:::::::.::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 KPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFL
::::::::::::. : :. .:. : :::. . ::.::::::::::.:..::: :
CCDS58 KPLLEKWLNDAESSPSDPSVSTPS--SYPSLSE--VFGRKRKKRTSIETNIRLTLEKRFQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHM
: ::.:::: .::::: :::::.::::::::::::::: : .: .: :: :. ..
CCDS58 DNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRIN-CPVA----TPIKPPVYNSRL
310 320 330 340 350
370 380 390 400 410 420
pF1KB9 VTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTP
:.:.:. : : . . :.. :::. : .. .:: ..: ... .: :: .:.
CCDS58 VSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNS
360 370 380 390 400 410
430 440 450 460
pF1KB9 PPPATTNSTNPSPQGSHSAIGLSGLNPSTGPGLWWNPAPYQP
.. ::.. . .::
CCDS58 A--SSFNSSGSWYRWNHSTYLH
420 430
>>CCDS8431.1 POU2F3 gene_id:25833|Hs108|chr11 (436 aa)
initn: 749 init1: 525 opt: 934 Z-score: 544.7 bits: 110.0 E(32554): 5.1e-24
Smith-Waterman score: 1134; 49.6% identity (67.0% similar) in 448 aa overlap (28-439:6-432)
10 20 30 40 50
pF1KB9 MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQNPQNKTSPFSVSPTGP-
: ::: . .: .. . .. : .: : .
CCDS84 MVNLESMHTDIKMSGDVADSTDARSTLS--QVEPGNDR
10 20 30
60 70 80 90 100
pF1KB9 -----STKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAG-------DIQQLL
. .::.:: : :: . : .: :: :. :..:.:..: :. .:
CCDS84 NGLDFNRQIKTEDLS-DSLQQT-LSHRPC--HLSQGPAMMSGNQMSGLNASPCQDMASLH
40 50 60 70 80 90
110 120 130 140 150 160
pF1KB9 QLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQ
:::::::::: :: .:::: :.: .: :: :::. .::: :..:: : :: .:
CCDS84 PLQQLVLVPGH-LQSVSQFLLSQTQPGQQGL--QPNLLPFPQQ-QSGLLLPQTGPGLASQ
100 110 120 130 140
170 180 190 200
pF1KB9 -------PPKCLEP----------PSH-P-----EEPSDLEELEQFARTFKQRRIKLGFT
: . ::: :.: : .:::::::::.::.::::::::::::
CCDS84 AFGHPGLPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKFAKTFKQRRIKLGFT
150 160 170 180 190 200
210 220 230 240 250 260
pF1KB9 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSP
:::::::::::::::::::::::::::::::::::::::::::::::::. : :. .:
CCDS84 QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSDPSVSTP
210 220 230 240 250 260
270 280 290 300 310 320
pF1KB9 NQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEV
. : :::. . ::.::::::::::.:..::: : : ::.:::: .::::: :::::
CCDS84 S--SYPSLSE--VFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEV
270 280 290 300 310 320
330 340 350 360 370 380
pF1KB9 IRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTV
.::::::::::::::: : .: .: :: :. ..:.:.:. : : . . :.. ::
CCDS84 VRVWFCNRRQKEKRIN-CPVA----TPIKPPVYNSRLVSPSGSLGPLSVPPVHSTMPGTV
330 340 350 360 370
390 400 410 420 430 440
pF1KB9 TTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLS
:. : .. .:: ..: ... .: :: .:. .. ::.. . .::
CCDS84 TSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSA--SSFNSSGSWYRWNHSTYLH
380 390 400 410 420 430
450 460
pF1KB9 GLNPSTGPGLWWNPAPYQP
463 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:11:10 2016 done: Sun Nov 6 12:11:10 2016
Total Scan time: 3.860 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]