(Linear) (Six-base) MAPSORT of: KIBB9439.seq Check: 7776 from: 1 to: 1389 KIBB9439.orf With 182 enzymes: SgfI * July 15, 2010 18:32 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 375 1389 Size: 375 1014 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 215 642 1389 Size: 215 427 747 Fragments arranged by size: 747 427 215 AflIII A'CryG_T Cuts at: 0 710 1389 Size: 710 679 AlwNI CAG_nnn'CTG Cuts at: 0 333 378 1389 Size: 333 45 1011 Fragments arranged by size: 1011 333 45 ApaI G_GGCC'C Cuts at: 0 1354 1389 Size: 1354 35 AvaI C'yCGr_G Cuts at: 0 479 532 1389 Size: 479 53 857 Fragments arranged by size: 857 479 53 BanI G'GyrC_C Cuts at: 0 995 1389 Size: 995 394 BanII G_rGCy'C Cuts at: 0 24 462 542 1354 1389 Size: 24 438 80 812 35 Fragments arranged by size: 812 438 80 35 24 BbeI G_GCGC'C Cuts at: 0 999 1389 Size: 999 390 BbsI GAAGACnn'nnnn_ Cuts at: 0 203 1389 Size: 203 1186 BbvCI CC'TCA_GC Cuts at: 0 239 443 1164 1389 Size: 239 204 721 225 Fragments arranged by size: 721 239 225 204 BglI GCCn_nnn'nGGC Cuts at: 0 407 833 1304 1389 Size: 407 426 471 85 Fragments arranged by size: 471 426 407 85 BlpI GC'TnA_GC Cuts at: 0 799 1389 Size: 799 590 Bme1580I G_kGCm'C Cuts at: 0 1354 1389 Size: 1354 35 BmrI ACTGGGnnnn_n' Cuts at: 0 170 197 536 1389 Size: 170 27 339 853 Fragments arranged by size: 853 339 170 27 BmtI G_CTAG'C Cuts at: 0 298 1389 Size: 298 1091 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 8 70 304 310 343 571 580 754 Size: 8 62 234 6 33 228 9 174 Cuts at: 754 1220 1389 Size: 466 169 Fragments arranged by size: 466 234 228 174 169 62 33 9 8 6 Bpu10I CC'TnA_GC Cuts at: 0 239 443 697 1164 1389 Size: 239 204 254 467 225 Fragments arranged by size: 467 254 239 225 204 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 706 759 1286 1389 Size: 706 53 527 103 Fragments arranged by size: 706 527 103 53 BsaHI Gr'CG_yC Cuts at: 0 996 1389 Size: 996 393 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 299 329 1389 Size: 299 30 1060 Fragments arranged by size: 1060 299 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 307 550 568 940 1389 Size: 307 243 18 372 449 Fragments arranged by size: 449 372 307 243 18 BseYI C'CCAG_C Cuts at: 0 219 248 298 392 473 600 784 808 Size: 219 29 50 94 81 127 184 24 Cuts at: 808 1045 1186 1294 1342 1389 Size: 237 141 108 48 47 Fragments arranged by size: 237 219 184 141 127 108 94 81 50 48 47 29 24 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 937 1389 Size: 937 452 BsiEI CG_ry'CG Cuts at: 0 837 1389 Size: 837 552 BsiHKAI G_wGCw'C Cuts at: 0 89 462 1144 1389 Size: 89 373 682 245 Fragments arranged by size: 682 373 245 89 BsmBI CGTCTCn'nnnn_ Cuts at: 0 834 1389 Size: 834 555 Bsp1286I G_dGCh'C Cuts at: 0 24 89 462 542 1144 1354 1389 Size: 24 65 373 80 602 210 35 Fragments arranged by size: 602 373 210 80 65 35 24 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 375 1389 Size: 375 1014 BsrFI r'CCGG_y Cuts at: 0 243 992 1059 1389 Size: 243 749 67 330 Fragments arranged by size: 749 330 243 67 BstAPI GCAn_nnn'nTGC Cuts at: 0 336 1389 Size: 336 1053 BstXI CCAn_nnnn'nTGG Cuts at: 0 298 513 549 1389 Size: 298 215 36 840 Fragments arranged by size: 840 298 215 36 BstYI r'GATC_y Cuts at: 0 929 1389 Size: 929 460 BtgI C'CryG_G Cuts at: 0 632 1389 Size: 632 757 BtsI GCAGTG_nn' Cuts at: 0 1032 1389 Size: 1032 357 EaeI y'GGCC_r Cuts at: 0 629 834 1061 1271 1389 Size: 629 205 227 210 118 Fragments arranged by size: 629 227 210 205 118 EagI C'GGCC_G Cuts at: 0 834 1389 Size: 834 555 EarI CTCTTCn'nnn_ Cuts at: 0 467 844 886 1389 Size: 467 377 42 503 Fragments arranged by size: 503 467 377 42 EcoICRI GAG'CTC Cuts at: 0 460 1389 Size: 460 929 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 8 70 215 304 310 343 571 580 Size: 8 62 145 89 6 33 228 9 Cuts at: 580 642 754 1220 1389 Size: 62 112 466 169 Fragments arranged by size: 466 228 169 145 112 89 62 62 33 9 8 6 EcoO109I rG'GnC_Cy Cuts at: 0 687 1106 1351 1389 Size: 687 419 245 38 Fragments arranged by size: 687 419 245 38 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 621 1389 Size: 621 768 HaeII r_GCGC'y Cuts at: 0 999 1389 Size: 999 390 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 64 96 411 443 508 540 748 780 Size: 64 32 315 32 65 32 208 32 Cuts at: 780 1389 Size: 609 Fragments arranged by size: 609 315 208 65 64 32 32 32 32 HincII GTy'rAC Cuts at: 0 281 1389 Size: 281 1108 HindIII A'AGCT_T Cuts at: 0 1124 1389 Size: 1124 265 KasI G'GCGC_C Cuts at: 0 995 1389 Size: 995 394 MscI TGG'CCA Cuts at: 0 631 1389 Size: 631 758 MspA1I CmG'CkG Cuts at: 0 333 798 951 1168 1198 1389 Size: 333 465 153 217 30 191 Fragments arranged by size: 465 333 217 191 153 30 NaeI GCC'GGC Cuts at: 0 245 1061 1389 Size: 245 816 328 Fragments arranged by size: 816 328 245 NarI GG'CG_CC Cuts at: 0 996 1389 Size: 996 393 NcoI C'CATG_G Cuts at: 0 632 1389 Size: 632 757 NdeI CA'TA_TG Cuts at: 0 1079 1389 Size: 1079 310 NgoMIV G'CCGG_C Cuts at: 0 243 1059 1389 Size: 243 816 330 Fragments arranged by size: 816 330 243 NheI G'CTAG_C Cuts at: 0 294 1389 Size: 294 1095 NspI r_CATG'y Cuts at: 0 714 1389 Size: 714 675 PasI CC'CwG_GG Cuts at: 0 453 1051 1389 Size: 453 598 338 Fragments arranged by size: 598 453 338 PciI A'CATG_T Cuts at: 0 710 1389 Size: 710 679 PflMI CCAn_nnn'nTGG Cuts at: 0 333 1389 Size: 333 1056 PfoI T'CCnGG_A Cuts at: 0 731 1389 Size: 731 658 PpuMI rG'GwC_Cy Cuts at: 0 1106 1389 Size: 1106 283 PshAI GACnn'nnGTC Cuts at: 0 871 1389 Size: 871 518 PspOMI G'GGCC_C Cuts at: 0 1350 1389 Size: 1350 39 PstI C_TGCA'G Cuts at: 0 1027 1389 Size: 1027 362 PvuII CAG'CTG Cuts at: 0 333 798 951 1168 1198 1389 Size: 333 465 153 217 30 191 Fragments arranged by size: 465 333 217 191 153 30 SacI G_AGCT'C Cuts at: 0 462 1389 Size: 462 927 SapI GCTCTTCn'nnn_ Cuts at: 0 467 1389 Size: 467 922 SfcI C'TryA_G Cuts at: 0 1023 1068 1389 Size: 1023 45 321 Fragments arranged by size: 1023 321 45 SfiI GGCCn_nnn'nGGCC Cuts at: 0 833 1389 Size: 833 556 SfoI GGC'GCC Cuts at: 0 997 1389 Size: 997 392 SmaI CCC'GGG Cuts at: 0 481 1389 Size: 481 908 SmlI C'TyrA_G Cuts at: 0 721 774 1301 1389 Size: 721 53 527 88 Fragments arranged by size: 721 527 88 53 StuI AGG'CCT Cuts at: 0 410 1334 1389 Size: 410 924 55 Fragments arranged by size: 924 410 55 StyI C'CwwG_G Cuts at: 0 632 1092 1389 Size: 632 460 297 Fragments arranged by size: 632 460 297 TatI w'GTAC_w Cuts at: 0 178 1389 Size: 178 1211 Tth111I GACn'n_nGTC Cuts at: 0 762 1389 Size: 762 627 XmaI C'CCGG_G Cuts at: 0 479 1389 Size: 479 910 Enzymes that do cut: AarI AcuI AflIII AlwNI ApaI AvaI BanI BanII BbeI BbsI BbvCI BglI BlpI Bme1580I BmrI BmtI BpmI Bpu10I BpuEI BsaHI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmBI Bsp1286I BspMI BsrFI BstAPI BstXI BstYI BtgI BtsI EaeI EagI EarI EcoICRI Eco57MI EcoO109I FalI HaeII Hin4I HincII HindIII KasI MscI MspA1I NaeI NarI NcoI NdeI NgoMIV NheI NspI PasI PciI PflMI PfoI PpuMI PshAI PspOMI PstI PvuII SacI SapI SfcI SfiI SfoI SmaI SmlI StuI StyI TatI Tth111I XmaI Enzymes that do not cut: AatII AccI Acc65I AclI AfeI AflII AgeI AhdI AleI AlfI AloI ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI BcgI BciVI BclI BfrBI BglII BmgBI BplI BsaI BsaAI BsaBI BsaWI BsiWI BsmI BspEI BspHI BsrBI BsrDI BsrGI BssHII BssSI BstBI BstEII BstZ17I Bsu36I BtgZI ClaI CspCI DraI DraIII DrdI EciI EcoNI EcoRI EcoRV FseI FspI FspAI HpaI KpnI MfeI MluI MmeI MslI NotI NruI NsiI PacI PmeI PmlI PpiI PsiI PspXI PsrI PvuI RsrII SacII SalI SanDI SbfI ScaI SexAI SgfI SgrAI SnaBI SpeI SphI SrfI SspI SwaI TaqII TstI XbaI XcmI XhoI XmnI ZraI