Result of FASTA (ccds) for
pFN21AE6513
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6513, 139 aa
1>>>pF1KE6513 139 - 139 aa - 139 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9071+/-0.000781; mu= 12.6477+/- 0.047
mean_var=52.2924+/-10.346, 0's: 0 Z-trim(106.1): 25 B-trim: 0 in 0/49
Lambda= 0.177360
statistics sampled from 8749 (8773) to 8749 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.269), width: 16
Scan time: 1.550
The best scores are: opt bits E(32554)
CCDS33024.1 LGALS13 gene_id:29124|Hs108|chr19 ( 139) 958 252.7 5.5e-68
CCDS54267.1 LGALS16 gene_id:148003|Hs108|chr19 ( 142) 687 183.3 4.2e-47
CCDS46073.1 LGALS14 gene_id:56891|Hs108|chr19 ( 139) 651 174.1 2.4e-44
CCDS12542.1 LGALS14 gene_id:56891|Hs108|chr19 ( 168) 619 166.0 8.4e-42
CCDS33025.1 CLC gene_id:1178|Hs108|chr19 ( 142) 485 131.6 1.5e-31
CCDS12521.1 LGALS4 gene_id:3960|Hs108|chr19 ( 323) 241 69.4 1.9e-12
CCDS11222.1 LGALS9 gene_id:3965|Hs108|chr17 ( 355) 235 67.8 6.1e-12
CCDS82093.1 LGALS9 gene_id:3965|Hs108|chr17 ( 246) 233 67.3 6.3e-12
CCDS32592.1 LGALS9 gene_id:3965|Hs108|chr17 ( 323) 233 67.3 8e-12
CCDS42283.1 LGALS9B gene_id:284194|Hs108|chr17 ( 355) 224 65.0 4.3e-11
CCDS32587.1 LGALS9C gene_id:654346|Hs108|chr17 ( 356) 221 64.3 7.3e-11
>>CCDS33024.1 LGALS13 gene_id:29124|Hs108|chr19 (139 aa)
initn: 958 init1: 958 opt: 958 Z-score: 1334.0 bits: 252.7 E(32554): 5.5e-68
Smith-Waterman score: 958; 100.0% identity (100.0% similar) in 139 aa overlap (1-139:1-139)
10 20 30 40 50 60
pF1KE6 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF
70 80 90 100 110 120
130
pF1KE6 VKMVQVSRDISLTSVCVCN
:::::::::::::::::::
CCDS33 VKMVQVSRDISLTSVCVCN
130
>>CCDS54267.1 LGALS16 gene_id:148003|Hs108|chr19 (142 aa)
initn: 687 init1: 687 opt: 687 Z-score: 959.1 bits: 183.3 E(32554): 4.2e-47
Smith-Waterman score: 687; 75.5% identity (87.1% similar) in 139 aa overlap (1-139:1-139)
10 20 30 40 50 60
pF1KE6 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN
:: : :::::::::::::::::::: : : ::.:::::::::.:.:::.:::..:::.:
CCDS54 MSFLTVPYKLPVSLSVGSCVIIKGTLIDSSINEPQLQVDFYTEMNEDSEIAFHLRVHLGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF
.:::: ::::::::::. :::::::: :.: ::: .::::.:::: ::.::::::::.
CCDS54 RVVMNSREFGIWMLEENLHYVPFEDGKPFDLRIYVCHNEYEVKVNGEYIYAFVHRIPPSY
70 80 90 100 110 120
130
pF1KE6 VKMVQVSRDISLTSVCVCN
:::.:: ::.:: :: : :
CCDS54 VKMIQVWRDVSLDSVLVNNGRR
130 140
>>CCDS46073.1 LGALS14 gene_id:56891|Hs108|chr19 (139 aa)
initn: 662 init1: 651 opt: 651 Z-score: 909.5 bits: 174.1 E(32554): 2.4e-44
Smith-Waterman score: 651; 67.6% identity (84.2% similar) in 139 aa overlap (1-139:1-139)
10 20 30 40 50 60
pF1KE6 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN
:::::::: ::::: ::::::: :::: .:..::::.:.::: :::::::::.::.:::.
CCDS46 MSSLPVPYTLPVSLPVGSCVIITGTPILTFVKDPQLEVNFYTGMDEDSDIAFQFRLHFGH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF
..:: :::: :: :.:::::: :::::::...::.. ::: :::.:.::.::.
CCDS46 PAIMNSCVFGIWRYEEKCYYLPFEDGKPFELCIYVRHKEYKVMVNGQRIYNFAHRFPPAS
70 80 90 100 110 120
130
pF1KE6 VKMVQVSRDISLTSVCVCN
:::.:: :::::: : . .
CCDS46 VKMLQVFRDISLTRVLISD
130
>>CCDS12542.1 LGALS14 gene_id:56891|Hs108|chr19 (168 aa)
initn: 619 init1: 619 opt: 619 Z-score: 864.0 bits: 166.0 E(32554): 8.4e-42
Smith-Waterman score: 619; 66.4% identity (83.6% similar) in 134 aa overlap (6-139:35-168)
10 20 30
pF1KE6 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQ
::: ::::: ::::::: :::: .:..:::
CCDS12 HRLHLCKYWGCAVSNVCRFWEGRPLPLMIVVPYTLPVSLPVGSCVIITGTPILTFVKDPQ
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE6 LQVDFYTDMDEDSDIAFRFRVHFGNHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYV
:.:.::: :::::::::.::.:::. ..:: :::: :: :.:::::: :::::::
CCDS12 LEVNFYTGMDEDSDIAFQFRLHFGHPAIMNSCVFGIWRYEEKCYYLPFEDGKPFELCIYV
70 80 90 100 110 120
100 110 120 130
pF1KE6 HYNEYEIKVNGIRIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN
...::.. ::: :::.:.::.::. :::.:: :::::: : . .
CCDS12 RHKEYKVMVNGQRIYNFAHRFPPASVKMLQVFRDISLTRVLISD
130 140 150 160
>>CCDS33025.1 CLC gene_id:1178|Hs108|chr19 (142 aa)
initn: 485 init1: 485 opt: 485 Z-score: 679.8 bits: 131.6 E(32554): 1.5e-31
Smith-Waterman score: 485; 55.5% identity (73.0% similar) in 137 aa overlap (1-137:1-137)
10 20 30 40 50 60
pF1KE6 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFRFRVHFGN
:: ::::: .:::.:: : ::: :. :.:.: :::::.:.: :.:::.:.:.: ::
CCDS33 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF
.:::: ::.: : . . .::.::..::: : : ..:.. ::: : : ::: :
CCDS33 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA
70 80 90 100 110 120
130
pF1KE6 VKMVQVSRDISLTSVCVCN
:::::: ::::::. :
CCDS33 VKMVQVWRDISLTKFNVSYLKR
130 140
>>CCDS12521.1 LGALS4 gene_id:3960|Hs108|chr19 (323 aa)
initn: 191 init1: 163 opt: 241 Z-score: 336.8 bits: 69.4 E(32554): 1.9e-12
Smith-Waterman score: 241; 34.1% identity (61.5% similar) in 135 aa overlap (3-135:16-147)
10 20 30 40
pF1KE6 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDED
.:: .: .:.:: : :.:. . . .. :.: . .:
CCDS12 MAYVPAPGYQPTYNPTLPYYQPIPGGLNVGMSVYIQGVASEHM---KRFFVNFVVGQDPG
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 SDIAFRFRVHFG--NHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVN
::.::.: .: ..::.: . : : :: .::. : ::: . : ..:.. ::
CCDS12 SDVAFHFNPRFDGWDKVVFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYKVVVN
60 70 80 90 100 110
110 120 130
pF1KE6 GIRIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN
: .: . ::.: ..: .::. :..: :.
CCDS12 GNPFYEYGHRLPLQMVTHLQVDGDLQLQSINFIGGQPLRPQGPPMMPPYPGPGHCHQQLN
120 130 140 150 160 170
>>CCDS11222.1 LGALS9 gene_id:3965|Hs108|chr17 (355 aa)
initn: 202 init1: 162 opt: 235 Z-score: 327.9 bits: 67.8 E(32554): 6.1e-12
Smith-Waterman score: 235; 31.2% identity (62.3% similar) in 138 aa overlap (6-139:15-149)
10 20 30 40
pF1KE6 MSSLPVPYKLPVS--LSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSD
::.. .. :. : . ..:: . : . .. :.: : .. .:
CCDS11 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSS--SGTRFAVNFQTGFS-GND
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 IAFRFRVHF--GNHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGI
:::.: .: :..:: : :. : : :: ..::. : :.::. :. ..... ::::
CCDS11 IAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGI
60 70 80 90 100 110
110 120 130
pF1KE6 RIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN
. . ::.: : ..:. ...:. . :
CCDS11 LFVQYFHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPRGR
120 130 140 150 160 170
CCDS11 RQKPPGVWPANPAPITQTVIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYP
180 190 200 210 220 230
>>CCDS82093.1 LGALS9 gene_id:3965|Hs108|chr17 (246 aa)
initn: 202 init1: 162 opt: 233 Z-score: 327.6 bits: 67.3 E(32554): 6.3e-12
Smith-Waterman score: 233; 31.3% identity (63.4% similar) in 134 aa overlap (6-135:15-145)
10 20 30 40
pF1KE6 MSSLPVPYKLPVS--LSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSD
::.. .. :. : . ..:: . : . .. :.: : .. .:
CCDS82 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSS--SGTRFAVNFQTGFS-GND
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 IAFRFRVHF--GNHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGI
:::.: .: :..:: : :. : : :: ..::. : :.::. :. ..... ::::
CCDS82 IAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGI
60 70 80 90 100 110
110 120 130
pF1KE6 RIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN
. . ::.: : ..:. ...:. .
CCDS82 LFVQYFHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFS
120 130 140 150 160 170
>>CCDS32592.1 LGALS9 gene_id:3965|Hs108|chr17 (323 aa)
initn: 202 init1: 162 opt: 233 Z-score: 325.7 bits: 67.3 E(32554): 8e-12
Smith-Waterman score: 233; 31.3% identity (63.4% similar) in 134 aa overlap (6-135:15-145)
10 20 30 40
pF1KE6 MSSLPVPYKLPVS--LSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSD
::.. .. :. : . ..:: . : . .. :.: : .. .:
CCDS32 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSS--SGTRFAVNFQTGFS-GND
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 IAFRFRVHF--GNHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGI
:::.: .: :..:: : :. : : :: ..::. : :.::. :. ..... ::::
CCDS32 IAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGI
60 70 80 90 100 110
110 120 130
pF1KE6 RIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN
. . ::.: : ..:. ...:. .
CCDS32 LFVQYFHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFS
120 130 140 150 160 170
>>CCDS42283.1 LGALS9B gene_id:284194|Hs108|chr17 (355 aa)
initn: 190 init1: 150 opt: 224 Z-score: 312.6 bits: 65.0 E(32554): 4.3e-11
Smith-Waterman score: 224; 30.4% identity (61.6% similar) in 138 aa overlap (6-139:15-149)
10 20 30 40
pF1KE6 MSSLPVPYKLPVS--LSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSD
::.. .. :. : . ..:. . : . .. ::: : .. .:
CCDS42 MAFSGSQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSS--SGTRFAVDFQTGFS-GND
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 IAFRFRVHF--GNHVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGI
:::.: .: :..:: : :. : : :: ..::. : :.::. :. ..... :::
CCDS42 IAFHFNPRFEDGGYVVCNTRQKGRWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGS
60 70 80 90 100 110
110 120 130
pF1KE6 RIYGFVHRIPPSFVKMVQVSRDISLTSVCVCN
. . ::.: : ..:. ...:. . :
CCDS42 LFVQYFHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPRGR
120 130 140 150 160 170
CCDS42 RQKPPSVRPANPAPITQTVIHTVQSASGQMFSTPAIPPMMYPHPAYPMPFITTIPGGLYP
180 190 200 210 220 230
139 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:59:20 2016 done: Tue Nov 8 13:59:20 2016
Total Scan time: 1.550 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]