Result of FASTA (ccds) for
pFN21AE2274
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2274, 299 aa
1>>>pF1KE2274 299 - 299 aa - 299 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3544+/-0.000704; mu= 16.0833+/- 0.043
mean_var=84.6326+/-17.089, 0's: 0 Z-trim(110.8): 47 B-trim: 0 in 0/51
Lambda= 0.139414
statistics sampled from 11854 (11903) to 11854 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.366), width: 16
Scan time: 2.810
The best scores are: opt bits E(32554)
CCDS32720.1 CD300A gene_id:11314|Hs108|chr17 ( 299) 1991 409.8 1.3e-114
CCDS58590.1 CD300A gene_id:11314|Hs108|chr17 ( 186) 1098 230.0 1e-60
CCDS82197.1 CD300A gene_id:11314|Hs108|chr17 ( 169) 1068 224.0 6.3e-59
CCDS11701.1 CD300C gene_id:10871|Hs108|chr17 ( 224) 806 171.4 5.7e-43
CCDS82196.1 CD300A gene_id:11314|Hs108|chr17 ( 150) 639 137.6 5.4e-33
CCDS11702.1 CD300E gene_id:342510|Hs108|chr17 ( 205) 454 100.5 1.1e-21
CCDS11700.2 CD300LB gene_id:124599|Hs108|chr17 ( 201) 350 79.6 2.1e-15
CCDS54132.1 CD300LG gene_id:146894|Hs108|chr17 ( 273) 335 76.7 2.2e-14
CCDS42379.1 CD300LD gene_id:100131439|Hs108|chr17 ( 194) 304 70.3 1.3e-12
CCDS74152.1 CD300LF gene_id:146722|Hs108|chr17 ( 305) 303 70.3 2e-12
CCDS54133.1 CD300LG gene_id:146894|Hs108|chr17 ( 233) 293 68.2 6.7e-12
CCDS74150.1 CD300LF gene_id:146722|Hs108|chr17 ( 239) 286 66.8 1.8e-11
CCDS54131.1 CD300LG gene_id:146894|Hs108|chr17 ( 307) 285 66.7 2.5e-11
CCDS11470.1 CD300LG gene_id:146894|Hs108|chr17 ( 332) 285 66.7 2.7e-11
CCDS4855.1 NCR2 gene_id:9436|Hs108|chr6 ( 276) 284 66.5 2.7e-11
CCDS56429.1 NCR2 gene_id:9436|Hs108|chr6 ( 258) 278 65.2 5.8e-11
CCDS74151.1 CD300LF gene_id:146722|Hs108|chr17 ( 244) 277 65.0 6.4e-11
CCDS11704.1 CD300LF gene_id:146722|Hs108|chr17 ( 290) 277 65.1 7.3e-11
>>CCDS32720.1 CD300A gene_id:11314|Hs108|chr17 (299 aa)
initn: 1991 init1: 1991 opt: 1991 Z-score: 2171.4 bits: 409.8 E(32554): 1.3e-114
Smith-Waterman score: 1991; 99.7% identity (100.0% similar) in 299 aa overlap (1-299:1-299)
10 20 30 40 50 60
pF1KE2 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHDPVVEV
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS32 IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 EVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 LLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLELLMWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLELLMWP
190 200 210 220 230 240
250 260 270 280 290
pF1KE2 LQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREEEPDSDYSVIRKT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREEEPDSDYSVIRKT
250 260 270 280 290
>>CCDS58590.1 CD300A gene_id:11314|Hs108|chr17 (186 aa)
initn: 1098 init1: 1098 opt: 1098 Z-score: 1203.5 bits: 230.0 E(32554): 1e-60
Smith-Waterman score: 1098; 100.0% identity (100.0% similar) in 174 aa overlap (126-299:13-186)
100 110 120 130 140 150
pF1KE2 EDAGTYWCGVDTPWLQDFHDPVVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTT
::::::::::::::::::::::::::::::
CCDS58 MWLPWALLLLWVPASTSMTPASITAAKTSTITTAFPPVSSTT
10 20 30 40
160 170 180 190 200 210
pF1KE2 LFAVGATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LFAVGATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSE
50 60 70 80 90 100
220 230 240 250 260 270
pF1KE2 LSQNPKQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LSQNPKQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSN
110 120 130 140 150 160
280 290
pF1KE2 TNRIAAQRPREEEPDSDYSVIRKT
::::::::::::::::::::::::
CCDS58 TNRIAAQRPREEEPDSDYSVIRKT
170 180
>>CCDS82197.1 CD300A gene_id:11314|Hs108|chr17 (169 aa)
initn: 1068 init1: 1068 opt: 1068 Z-score: 1171.4 bits: 224.0 E(32554): 6.3e-59
Smith-Waterman score: 1068; 100.0% identity (100.0% similar) in 169 aa overlap (131-299:1-169)
110 120 130 140 150 160
pF1KE2 YWCGVDTPWLQDFHDPVVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVG
::::::::::::::::::::::::::::::
CCDS82 MTPASITAAKTSTITTAFPPVSSTTLFAVG
10 20 30
170 180 190 200 210 220
pF1KE2 ATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE2 KQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIA
100 110 120 130 140 150
290
pF1KE2 AQRPREEEPDSDYSVIRKT
:::::::::::::::::::
CCDS82 AQRPREEEPDSDYSVIRKT
160
>>CCDS11701.1 CD300C gene_id:10871|Hs108|chr17 (224 aa)
initn: 828 init1: 773 opt: 806 Z-score: 885.0 bits: 171.4 E(32554): 5.7e-43
Smith-Waterman score: 806; 61.8% identity (74.2% similar) in 217 aa overlap (2-209:6-220)
10 20 30 40 50
pF1KE2 MWLPW---ALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPP
: : ::::: ::: : ::. :::::::::::::: ::::::::::.:::::
CCDS11 MTARAWASWRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 QIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDF
::. :::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS11 QILRCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDF
70 80 90 100 110 120
120 130 140 150 160
pF1KE2 HDPVVEVEVSVFPASTSMTPASITAAKTSTITTAFP----PVSSTTLFAVGATHSASIQE
:::.::::::::::.:. . . .. :: : .: : . . : .:.
CCDS11 HDPIVEVEVSVFPAGTTTASSPQSSMGTSGPPTKLPVHTWPSVTRKDSPEPSPHPGSLFS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE2 ETEEV--VNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQS
... . : .::::::.:. .: :. . : :.: :
CCDS11 NVRFLLLVLLELPLLLSMLGAVL--WVNRPQRSSRSRQNWPKGENQ
190 200 210 220
230 240 250 260 270 280
pF1KE2 ELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREE
>>CCDS82196.1 CD300A gene_id:11314|Hs108|chr17 (150 aa)
initn: 651 init1: 636 opt: 639 Z-score: 705.8 bits: 137.6 E(32554): 5.4e-33
Smith-Waterman score: 778; 79.3% identity (79.3% similar) in 174 aa overlap (126-299:13-150)
100 110 120 130 140 150
pF1KE2 EDAGTYWCGVDTPWLQDFHDPVVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTT
::::::::::::::::::::::::::::::
CCDS82 MWLPWALLLLWVPASTSMTPASITAAKTSTITTAFPPVSSTT
10 20 30 40
160 170 180 190 200 210
pF1KE2 LFAVGATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LFAVGATHSASIQEETEEVVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSE
50 60 70 80 90 100
220 230 240 250 260 270
pF1KE2 LSQNPKQAATQSELHYANLELLMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSN
:::::::: ::::::::::::::::
CCDS82 LSQNPKQA------------------------------------SPREELHYASVVFDSN
110 120
280 290
pF1KE2 TNRIAAQRPREEEPDSDYSVIRKT
::::::::::::::::::::::::
CCDS82 TNRIAAQRPREEEPDSDYSVIRKT
130 140 150
>>CCDS11702.1 CD300E gene_id:342510|Hs108|chr17 (205 aa)
initn: 440 init1: 214 opt: 454 Z-score: 502.9 bits: 100.5 E(32554): 1.1e-21
Smith-Waterman score: 454; 41.9% identity (60.9% similar) in 215 aa overlap (1-211:1-204)
10 20 30 40 50 60
pF1KE2 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK
::: ::::: . ::..:. .:.: .: ::.: : ::. .. :::::: :..
CCDS11 MWLLPALLLLCLSGCLSLKGPGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCES
10 20 30 40 50 60
70 80 90 100 110
pF1KE2 IVETKGSAG-KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDF--HDPV
:::::: .::::::::: : :.::::..::.:.:::.::: ..: :. : .::
CCDS11 IVETKGEEKVERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQTVWVLDSWSRDPS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 VEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNS
:.: : :: : :: : : : . : . . : :...... ..:
CCDS11 DLVRVYVSPAIT--TPRRTTHPATPPIFLVVNPGRNLSTGEV-LTQNSGFR------LSS
130 140 150 160 170
180 190 200 210 220 230
pF1KE2 QLPLLLSLLAL-LLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLEL
::. :: : ::: ..:: . : .: :
CCDS11 PHFLLVVLLKLPLLLSMLGAVF--WVNRPQWAPPGR
180 190 200
240 250 260 270 280 290
pF1KE2 LMWPLQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREEEPDSDYSVI
>>CCDS11700.2 CD300LB gene_id:124599|Hs108|chr17 (201 aa)
initn: 347 init1: 211 opt: 350 Z-score: 389.9 bits: 79.6 E(32554): 2.1e-15
Smith-Waterman score: 350; 41.9% identity (69.1% similar) in 136 aa overlap (1-135:1-132)
10 20 30 40 50 60
pF1KE2 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK
:::: ::::: . :::... ..: .: :::.::: :.. .: :.::: . :
CCDS11 MWLPPALLLLSLSGCFSIQGPESVRAPEQGSLTVQCHYKQGWETYIKWWCRGVRWDTCKI
10 20 30 40 50 60
70 80 90 100 110
pF1KE2 IVETKGSA-GKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHDPVVE
..::.:: :... ::::.:. . .::::.:.: ..:: .::::.. . : ..
CCDS11 LIETRGSEQGEKSDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIE----RRGPDLGTQ
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 VEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQL
:.: : : ... : ::
CCDS11 VKVIVDPEGAASTTASSPTNSNMAVFIGSHKRNHYMLLVFVKVPILLILVTAILWLKGSQ
120 130 140 150 160 170
>>CCDS54132.1 CD300LG gene_id:146894|Hs108|chr17 (273 aa)
initn: 347 init1: 155 opt: 335 Z-score: 371.9 bits: 76.7 E(32554): 2.2e-14
Smith-Waterman score: 335; 40.9% identity (62.3% similar) in 159 aa overlap (3-157:6-156)
10 20 30 40 50
pF1KE2 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFL
: :. ::: :: :: . ..: : ..:.:: :..: : ::::: :..
CCDS54 MRLLVLLWGCLLL--PGYEALEGPEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILF
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 --CDKIV--ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDF
:. . : .:. . :::::::: .::. ::: ::: .::: :::::. .
CCDS54 SRCSGTIYAEEEGQETMK-GRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVE----KRG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 HDPVVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEE
: . . . ::::: .. ::. :: . .: . : ::. .:. .
CCDS54 PDESLLISLFVFPASPGLYPAATTAKQGKTGAEA-PPLPGTSQYGHERTSQYTGTSPHPA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 VVNSQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYAN
CCDS54 TSPPAGSSRPPMQLDSTSAEDTSPALSSGSSKPRVSIPMVRILAPVLVLLSLLSAAGLIA
180 190 200 210 220 230
>>CCDS42379.1 CD300LD gene_id:100131439|Hs108|chr17 (194 aa)
initn: 317 init1: 152 opt: 304 Z-score: 340.2 bits: 70.3 E(32554): 1.3e-12
Smith-Waterman score: 323; 36.1% identity (60.8% similar) in 194 aa overlap (1-190:1-185)
10 20 30 40 50
pF1KE2 MWLPWALLLLWVPGCFALSKCR---TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFL
::: .:::: .:: .: :: : :::.::: : . .: :. :. .
CCDS42 MWLSPSLLLLILPGYSIAAKITGPTTVNGSEQGSLTVQCAYGSGWETYLKWRCQGADWNY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 CDKIVETKGSAGK-RNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHDP
:. .:.:.:: . ...::::::. : ::::.::: ..:: .::::.. : . :
CCDS42 CNILVKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERPGI----DL
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 VVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVN
:.:.:.. :. : .... :.: . :: ...: . :.: . . .
CCDS42 GVKVQVTINPG----TQTAVSEWTTTTASLAFT-AAATQKTSSPLTRSPLKSTHFLFLFL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 SQLPLLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLEL
.::::::.:. .:
CCDS42 LELPLLLSMLGTVLWVNRPQRRS
180 190
>>CCDS74152.1 CD300LF gene_id:146722|Hs108|chr17 (305 aa)
initn: 419 init1: 168 opt: 303 Z-score: 336.4 bits: 70.3 E(32554): 2e-12
Smith-Waterman score: 448; 35.4% identity (60.1% similar) in 316 aa overlap (7-298:8-304)
10 20 30 40 50
pF1KE2 MWLPWALLLLWVPGCFALSKCR---TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIF
:::.:. : ... :: : :::.::: :.. .: :.:::
CCDS74 MPLLTLYLLLFWLSGYSIVTQITGPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 LCDKIVETKGSAGK-RNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLQDFHD
: .:.:.:: . . ::::.:. : .::::.:.: . :: :::::.. . .:
CCDS74 DCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIE----KTGND
70 80 90 100 110
120 130 140 150 160 170
pF1KE2 PVVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVV
: :.:.. :::: :: : ::: :: ::.. . . : .. .. ....
CCDS74 LGVTVQVTIDPAST---PAPTT--PTSTTFTA--PVTQEET-SSSPTLTGHHLDNRHKLL
120 130 140 150 160
180 190 200 210 220 230
pF1KE2 NSQLPLLLSLL-ALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQA--ATQSELHYA
.: .:: :. ..::::::.::::::::.. ::. : :.:. ...: ::
CCDS74 --KLSVLLPLIFTILLLLLVAASLLAWRMMKYQQKAAGMS-----PEQVLQPLEGDLCYA
170 180 190 200 210 220
240 250 260 270
pF1KE2 NLELLMWPLQEKPAPPR-------EVEVEYSTVAS-PREELHYASVVFDS--------NT
.: : . . . : . .::::: :.:: :.:.. :::... . :
CCDS74 DLTLQLAGTSPQKATTKLSSAQVDQVEVEYVTMASLPKEDISYASLTLGAEDQEPTYCNM
230 240 250 260 270 280
280 290
pF1KE2 NRIAAQRP-REEEPDSDYSVIRKT
...... : : : ..::.: .
CCDS74 GHLSSHLPGRGPEEPTEYSTISRP
290 300
299 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:14:04 2016 done: Sun Nov 6 12:14:04 2016
Total Scan time: 2.810 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]