FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7816, 596 aa 1>>>pF1KB7816 596 - 596 aa - 596 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.3098+/-0.000825; mu= 6.9635+/- 0.050 mean_var=173.0024+/-35.202, 0's: 0 Z-trim(114.3): 17 B-trim: 477 in 2/49 Lambda= 0.097510 statistics sampled from 14838 (14853) to 14838 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.456), width: 16 Scan time: 4.250 The best scores are: opt bits E(32554) CCDS32690.1 HSF5 gene_id:124535|Hs108|chr17 ( 596) 4096 588.2 1e-167 >>CCDS32690.1 HSF5 gene_id:124535|Hs108|chr17 (596 aa) initn: 4096 init1: 4096 opt: 4096 Z-score: 3124.6 bits: 588.2 E(32554): 1e-167 Smith-Waterman score: 4096; 100.0% identity (100.0% similar) in 596 aa overlap (1-596:1-596) 10 20 30 40 50 60 pF1KB7 MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MEALLSTPINPNNFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 GTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GTAGAGAEPELFKTTSFTSFIRQLNLYGFRKVVLGGPGGGKPAGNGPLHHFHNPHFRRDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 PQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 PQLLVHLKRLTSANKAKLAAGLEVPCRPPNRFQRLLITSASAATAPLQHQQPPPPAGPRP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 EPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EPHGPVAVGQFHRSFRRDSLSPYSCVSTPSHDHSTYPLKGLDRTPVPHRIWQNSLGMHPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 QVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QVETSPTFSDKGVPFPVLQRFPTEVTYTLQPSTTSVHVQQGPQTMVSSSQKYSNYTPSAQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 YSQAYYPTAVLQCCSPTHMDALSSCVTPTASSYAHCNYFQNPSMQSSYPVEFLPSNWPCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 YSQAYYPTAVLQCCSPTHMDALSSCVTPTASSYAHCNYFQNPSMQSSYPVEFLPSNWPCS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 TTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TTDENTKTEVNLEAVFQIVDELHSSPKLEMVKVEPVENQCPTSPSYRGQHILANSNNSNP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB7 CSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 CSASQASQLEPLTPVGSDIMSFVVGTEQAVACSLPQSPEYIYTIHTAQPVENSTIQESAA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB7 IQQAHVKLKEHLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 IQQAHVKLKEHLNHNPSPSSVVFVQEGPPFSTHQVDANIKCQTSSRENILPSEQMGFLIS 490 500 510 520 530 540 550 560 570 580 590 pF1KB7 EMGPASKPSEDTGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EMGPASKPSEDTGLATPARYREHRSNSQQGKSPDLHLLVDVACKQERFPKEEELKE 550 560 570 580 590 596 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:33:16 2016 done: Sun Nov 6 05:33:17 2016 Total Scan time: 4.250 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]