FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3010, 97 aa 1>>>pF1KE3010 97 - 97 aa - 97 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5144+/-0.000238; mu= 13.8933+/- 0.015 mean_var=57.3362+/-11.354, 0's: 0 Z-trim(122.6): 8 B-trim: 603 in 1/56 Lambda= 0.169379 statistics sampled from 41073 (41083) to 41073 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.837), E-opt: 0.2 (0.482), width: 16 Scan time: 4.720 The best scores are: opt bits E(85289) NP_004151 (OMIM: 600781) peptide YY preproprotein ( 97) 662 168.4 1.6e-42 XP_011523337 (OMIM: 600781) PREDICTED: peptide YY ( 97) 651 165.7 1e-41 NP_000896 (OMIM: 162640) pro-neuropeptide Y prepro ( 97) 332 87.8 3e-18 NP_002713 (OMIM: 167780) pancreatic prohormone iso ( 95) 177 49.9 7.5e-07 NP_001306138 (OMIM: 167780) pancreatic prohormone ( 101) 177 49.9 7.9e-07 XP_011523280 (OMIM: 167780) PREDICTED: pancreatic ( 104) 177 49.9 8.1e-07 >>NP_004151 (OMIM: 600781) peptide YY preproprotein [Hom (97 aa) initn: 662 init1: 662 opt: 662 Z-score: 884.3 bits: 168.4 E(85289): 1.6e-42 Smith-Waterman score: 662; 99.0% identity (99.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE3 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYASLRHYLNLVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYASLRHYLNLVT 10 20 30 40 50 60 70 80 90 pF1KE3 RQRYGKRDGPDRLLSKTFFPDGEDRPVRSRSEGPDLW ::::::::::: ::::::::::::::::::::::::: NP_004 RQRYGKRDGPDTLLSKTFFPDGEDRPVRSRSEGPDLW 70 80 90 >>XP_011523337 (OMIM: 600781) PREDICTED: peptide YY isof (97 aa) initn: 651 init1: 651 opt: 651 Z-score: 869.8 bits: 165.7 E(85289): 1e-41 Smith-Waterman score: 651; 97.9% identity (97.9% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE3 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYASLRHYLNLVT :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: XP_011 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPREDASPEELNRYYASLRHYLNLVT 10 20 30 40 50 60 70 80 90 pF1KE3 RQRYGKRDGPDRLLSKTFFPDGEDRPVRSRSEGPDLW ::::::::::: ::::::::::::::::::::::::: XP_011 RQRYGKRDGPDTLLSKTFFPDGEDRPVRSRSEGPDLW 70 80 90 >>NP_000896 (OMIM: 162640) pro-neuropeptide Y preproprot (97 aa) initn: 314 init1: 286 opt: 332 Z-score: 448.5 bits: 87.8 E(85289): 3e-18 Smith-Waterman score: 332; 54.1% identity (80.0% similar) in 85 aa overlap (13-97:13-97) 10 20 30 40 50 60 pF1KE3 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYASLRHYLNLVT :. :.::::::::..::: ::. ::::: :.. :::..::::.::.: NP_000 MLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPGEDAPAEDMARYYSALRHYINLIT 10 20 30 40 50 60 70 80 90 pF1KE3 RQRYGKRDGPDRLLSKTFFPDGEDRPVRSRSEGPDLW :::::::..:. :.: .. .. . :.: : : .: NP_000 RQRYGKRSSPETLISDLLMRESTENVPRTRLEDPAMW 70 80 90 >>NP_002713 (OMIM: 167780) pancreatic prohormone isoform (95 aa) initn: 175 init1: 167 opt: 177 Z-score: 244.0 bits: 49.9 E(85289): 7.5e-07 Smith-Waterman score: 177; 46.8% identity (71.0% similar) in 62 aa overlap (12-73:15-74) 10 20 30 40 50 pF1KE3 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYASLRHYLN : : : : ::: .. :..: ::..:.::.. .: :.::.:.: NP_002 MAAARLCLSLLLLSTCVALLLQPLLGA--QGAPLEPVYPGDNATPEQMAQYAADLRRYIN 10 20 30 40 50 60 70 80 90 pF1KE3 LVTRQRYGKRDGPDRLLSKTFFPDGEDRPVRSRSEGPDLW ..:: ::::: : : NP_002 MLTRPRYGKRHKEDTLAFSEWGSPHAAVPRELSPLDL 60 70 80 90 >>NP_001306138 (OMIM: 167780) pancreatic prohormone isof (101 aa) initn: 175 init1: 167 opt: 177 Z-score: 243.6 bits: 49.9 E(85289): 7.9e-07 Smith-Waterman score: 177; 46.8% identity (71.0% similar) in 62 aa overlap (12-73:21-80) 10 20 30 40 50 pF1KE3 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRYYAS : : : : ::: .. :..: ::..:.::.. .: :. NP_001 MCDCDLMAAARLCLSLLLLSTCVALLLQPLLGA--QGAPLEPVYPGDNATPEQMAQYAAD 10 20 30 40 50 60 70 80 90 pF1KE3 LRHYLNLVTRQRYGKRDGPDRLLSKTFFPDGEDRPVRSRSEGPDLW ::.:.:..:: ::::: : : NP_001 LRRYINMLTRPRYGKRHKEDTLAFSEWGSPHAAVPRELSPLDL 60 70 80 90 100 >>XP_011523280 (OMIM: 167780) PREDICTED: pancreatic proh (104 aa) initn: 175 init1: 167 opt: 177 Z-score: 243.4 bits: 49.9 E(85289): 8.1e-07 Smith-Waterman score: 177; 46.8% identity (71.0% similar) in 62 aa overlap (12-73:24-83) 10 20 30 40 pF1KE3 MVFVRRPWPALTTVLLALLVCLGALVDAYPIKPEAPGEDASPEELNRY : : : : ::: .. :..: ::..:.::.. .: XP_011 MTFVFALWNMAAARLCLSLLLLSTCVALLLQPLLGA--QGAPLEPVYPGDNATPEQMAQY 10 20 30 40 50 50 60 70 80 90 pF1KE3 YASLRHYLNLVTRQRYGKRDGPDRLLSKTFFPDGEDRPVRSRSEGPDLW :.::.:.:..:: ::::: : : XP_011 AADLRRYINMLTRPRYGKRHKEDTLAFSEWGSPHAAVPRELSPLDL 60 70 80 90 100 97 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:14:33 2016 done: Sun Nov 6 12:14:34 2016 Total Scan time: 4.720 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]