FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3972, 436 aa 1>>>pF1KE3972 436 - 436 aa - 436 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3714+/-0.000373; mu= 17.2407+/- 0.023 mean_var=84.9878+/-18.019, 0's: 0 Z-trim(114.2): 153 B-trim: 206 in 1/52 Lambda= 0.139122 statistics sampled from 23731 (23907) to 23731 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.28), width: 16 Scan time: 7.490 The best scores are: opt bits E(85289) NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 2974 607.1 2.8e-173 XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 2883 588.9 9.5e-168 NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 2372 486.3 6.5e-137 NP_001171835 (OMIM: 609086) F-box/LRR-repeat prote ( 404) 1935 398.5 1.6e-110 XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 441) 1935 398.6 1.7e-110 XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 1846 380.7 4.2e-105 XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 1650 341.2 2.2e-93 XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 1650 341.2 2.2e-93 NP_001165184 (OMIM: 605652) F-box/LRR-repeat prote ( 355) 1215 254.0 4.6e-67 XP_005265072 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1124 235.7 1.4e-61 XP_016861582 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1124 235.7 1.4e-61 XP_016861581 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1124 235.7 1.4e-61 XP_005265073 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1124 235.7 1.4e-61 XP_011531861 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 1124 235.7 1.4e-61 XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 576 125.9 2.9e-28 NP_001104508 (OMIM: 609080) F-box/LRR-repeat prote ( 690) 576 126.0 3.1e-28 XP_005250265 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 576 126.0 3.4e-28 XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 520 114.6 5.4e-25 NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 520 114.6 5.4e-25 XP_016864751 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 486) 520 114.6 5.7e-25 NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 520 114.6 5.8e-25 XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 584) 454 101.4 6.4e-21 XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 454 101.5 7.6e-21 XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 454 101.5 7.6e-21 XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 454 101.5 7.6e-21 NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 454 101.5 7.6e-21 XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 454 101.5 7.9e-21 XP_005250264 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 792) 454 101.5 8e-21 XP_016867339 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 822) 454 101.5 8.3e-21 XP_005250262 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 825) 454 101.5 8.3e-21 XP_011514231 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 783) 452 101.1 1.1e-20 XP_016867340 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 809) 452 101.1 1.1e-20 NP_699181 (OMIM: 609082) F-box/LRR-repeat protein ( 479) 445 99.5 1.9e-20 NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 410 92.7 3.4e-18 XP_011514230 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 797) 410 92.7 3.7e-18 XP_011541876 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 621) 337 78.0 7.9e-14 XP_011541877 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 618) 332 77.0 1.6e-13 XP_011541880 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 582) 331 76.7 1.7e-13 XP_011541879 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 589) 331 76.7 1.7e-13 XP_011541878 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 610) 331 76.7 1.8e-13 NP_001156787 (OMIM: 609083) F-box/LRR-repeat prote ( 701) 331 76.8 2e-13 XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 712) 331 76.8 2e-13 XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 319 74.2 6.8e-13 XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 319 74.2 7e-13 NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 319 74.2 7.2e-13 XP_016865218 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 567) 305 71.5 6.3e-12 XP_016866217 (OMIM: 605654,615471) PREDICTED: F-bo ( 379) 273 64.9 4e-10 NP_001265645 (OMIM: 605654,615471) F-box/LRR-repea ( 621) 273 65.1 5.8e-10 NP_036292 (OMIM: 605654,615471) F-box/LRR-repeat p ( 621) 273 65.1 5.8e-10 XP_016866215 (OMIM: 605654,615471) PREDICTED: F-bo ( 621) 273 65.1 5.8e-10 >>NP_116264 (OMIM: 609086) F-box/LRR-repeat protein 20 i (436 aa) initn: 2974 init1: 2974 opt: 2974 Z-score: 3231.8 bits: 607.1 E(85289): 2.8e-173 Smith-Waterman score: 2974; 100.0% identity (100.0% similar) in 436 aa overlap (1-436:1-436) 10 20 30 40 50 60 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_116 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP 370 380 390 400 410 420 430 pF1KE3 SVGGSRQRFCRCCIIL :::::::::::::::: NP_116 SVGGSRQRFCRCCIIL 430 >>XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-repea (473 aa) initn: 2883 init1: 2883 opt: 2883 Z-score: 3132.6 bits: 588.9 E(85289): 9.5e-168 Smith-Waterman score: 2883; 100.0% identity (100.0% similar) in 422 aa overlap (15-436:52-473) 10 20 30 40 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVT :::::::::::::::::::::::::::::: XP_005 AALPQSRHIQKRRKMAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVT 30 40 50 60 70 80 50 60 70 80 90 100 pF1KE3 LCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGV 90 100 110 120 130 140 110 120 130 140 150 160 pF1KE3 GDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKAL 150 160 170 180 190 200 170 180 190 200 210 220 pF1KE3 SEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELV 210 220 230 240 250 260 230 240 250 260 270 280 pF1KE3 TLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCS 270 280 290 300 310 320 290 300 310 320 330 340 pF1KE3 QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR 330 340 350 360 370 380 350 360 370 380 390 400 pF1KE3 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHL 390 400 410 420 430 440 410 420 430 pF1KE3 PNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL :::::::::::::::::::::::::::::::: XP_005 PNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL 450 460 470 >>NP_036289 (OMIM: 605652) F-box/LRR-repeat protein 2 is (423 aa) initn: 2372 init1: 2372 opt: 2372 Z-score: 2579.0 bits: 486.3 E(85289): 6.5e-137 Smith-Waterman score: 2372; 78.2% identity (94.5% similar) in 422 aa overlap (15-436:2-423) 10 20 30 40 50 60 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL .:::.::..::::::::::::::::::.::::::::.:.:::.::: NP_036 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILAL 10 20 30 40 70 80 90 100 110 120 pF1KE3 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE :::::::::::.:: :.::::::::::::::::::::::::.::::..:.:::::::::: NP_036 DGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIE 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD :::::::: ::.:: :::.:::::.::::.::.:::: :::..:::: :: ::.:::: NP_036 HLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI :.:::::.:::::: :::::.:.:::::::::::.: .: :::.::::.: .:::::.. NP_036 QITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVV 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE ::::::.::.:: :::::.::: :.::: :::::.:::.::::.:::.::: ::::::: NP_036 QICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE3 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE :::::::::. ::::::::::::::.::.:::::::::::::: ::.:..:.:..:.:.: NP_036 LEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLE 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE3 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP :::: ::::..::::..:..:::.:::::::.:::::::.:..::..:::::::::::: NP_036 LDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPT 350 360 370 380 390 400 430 pF1KE3 SVGGSRQRFCRCCIIL .:.:: ::.::::.:: NP_036 AVAGSGQRLCRCCVIL 410 420 >>NP_001171835 (OMIM: 609086) F-box/LRR-repeat protein 2 (404 aa) initn: 1880 init1: 1880 opt: 1935 Z-score: 2105.2 bits: 398.5 E(85289): 1.6e-110 Smith-Waterman score: 2696; 92.7% identity (92.7% similar) in 436 aa overlap (1-436:1-404) 10 20 30 40 50 60 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD ::::::::::::: ::::::::::::::: NP_001 VLNLNGCTKTTDA--------------------------------EGCPLLEQLNISWCD 130 140 190 200 210 220 230 240 pF1KE3 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE3 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE3 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE3 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP 330 340 350 360 370 380 430 pF1KE3 SVGGSRQRFCRCCIIL :::::::::::::::: NP_001 SVGGSRQRFCRCCIIL 390 400 >>XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-repea (441 aa) initn: 1880 init1: 1880 opt: 1935 Z-score: 2104.7 bits: 398.6 E(85289): 1.7e-110 Smith-Waterman score: 2605; 92.4% identity (92.4% similar) in 422 aa overlap (15-436:52-441) 10 20 30 40 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVT :::::::::::::::::::::::::::::: XP_005 AALPQSRHIQKRRKMAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVT 30 40 50 60 70 80 50 60 70 80 90 100 pF1KE3 LCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGV 90 100 110 120 130 140 110 120 130 140 150 160 pF1KE3 GDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKAL ::::::::::::::::::::::::::::: XP_005 GDNALRTFAQNCRNIEVLNLNGCTKTTDA------------------------------- 150 160 170 170 180 190 200 210 220 pF1KE3 SEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 -EGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELV 180 190 200 210 220 230 240 250 260 270 280 pF1KE3 TLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCS 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE3 QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIR 290 300 310 320 330 340 350 360 370 380 390 400 pF1KE3 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 HLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHL 350 360 370 380 390 400 410 420 430 pF1KE3 PNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL :::::::::::::::::::::::::::::::: XP_005 PNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL 410 420 430 440 >>XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-repea (454 aa) initn: 2724 init1: 1797 opt: 1846 Z-score: 2008.0 bits: 380.7 E(85289): 4.2e-105 Smith-Waterman score: 2300; 72.8% identity (88.1% similar) in 453 aa overlap (15-436:2-454) 10 20 30 40 50 60 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL .:::.::..::::::::::::::::::.::::::::.:.:::.::: XP_005 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILAL 10 20 30 40 70 80 90 100 110 120 pF1KE3 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE :::::::::::.:: :.::::::::::::::::::::::::.::::..:.:::::::::: XP_005 DGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIE 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD :::::::: ::.:: :::.:::::.::::.::.:::: :::..:::: :: ::.:::: XP_005 HLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCD 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI :.:::::.:::::: :::::.:.:::::::::::.: .: :::.::::.: .:::::.. XP_005 QITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVV 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE ::::::.::.:: :::::.::: :.::: :::::.:::.::::.:::.::: ::::::: XP_005 QICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHE 230 240 250 260 270 280 310 320 330 pF1KE3 LEKMDLEECVQITDSTLIQLSIHCPRLQVL------------------------------ :::::::::. ::::::::::::::.::.: XP_005 LEKMDLEECILITDSTLIQLSIHCPKLQALVSLSFSDIIHLLKMKEPSHHNKKLFGFSFC 290 300 310 320 330 340 340 350 360 370 380 pF1KE3 -SLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDC ::::::::::::: ::.:..:.:..:.:.::::: ::::..::::..:..:::.::::: XP_005 KSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDC 350 360 370 380 390 400 390 400 410 420 430 pF1KE3 QQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL ::.:::::::.:..::..:::::::::::: .:.:: ::.::::.:: XP_005 QQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 410 420 430 440 450 >>XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-repea (318 aa) initn: 1650 init1: 1650 opt: 1650 Z-score: 1797.4 bits: 341.2 E(85289): 2.2e-93 Smith-Waterman score: 1650; 75.3% identity (93.4% similar) in 304 aa overlap (133-436:15-318) 110 120 130 140 150 160 pF1KE3 GVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLK .:: :::.:::::.::::.::.:::: ::: XP_016 MDAQKSLTVRLLFFSTCYSLSRFCSKLKHLDLTSCVSITNSSLK 10 20 30 40 170 180 190 200 210 220 pF1KE3 ALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPE ..:::: :: ::.:::::.:::::.:::::: :::::.:.:::::::::::.: .: : XP_016 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE3 LVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVAR ::.::::.: .:::::.. ::::::.::.:: :::::.::: :.::: :::::.:::.:: XP_016 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR 110 120 130 140 150 160 290 300 310 320 330 340 pF1KE3 CSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDG ::.:::.::: ::::::::::::::::. ::::::::::::::.::.::::::::::::: XP_016 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDG 170 180 190 200 210 220 350 360 370 380 390 400 pF1KE3 IRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRT : ::.:..:.:..:.:.::::: ::::..::::..:..:::.:::::::.:::::::.:. XP_016 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA 230 240 250 260 270 280 410 420 430 pF1KE3 HLPNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL .::..:::::::::::: .:.:: ::.::::.:: XP_016 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 290 300 310 >>XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-repea (318 aa) initn: 1650 init1: 1650 opt: 1650 Z-score: 1797.4 bits: 341.2 E(85289): 2.2e-93 Smith-Waterman score: 1650; 75.3% identity (93.4% similar) in 304 aa overlap (133-436:15-318) 110 120 130 140 150 160 pF1KE3 GVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLK .:: :::.:::::.::::.::.:::: ::: XP_005 MDAQKSLTVRLLFFSTCYSLSRFCSKLKHLDLTSCVSITNSSLK 10 20 30 40 170 180 190 200 210 220 pF1KE3 ALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPE ..:::: :: ::.:::::.:::::.:::::: :::::.:.:::::::::::.: .: : XP_005 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE3 LVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVAR ::.::::.: .:::::.. ::::::.::.:: :::::.::: :.::: :::::.:::.:: XP_005 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR 110 120 130 140 150 160 290 300 310 320 330 340 pF1KE3 CSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDG ::.:::.::: ::::::::::::::::. ::::::::::::::.::.::::::::::::: XP_005 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDG 170 180 190 200 210 220 350 360 370 380 390 400 pF1KE3 IRHLGNGACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRT : ::.:..:.:..:.:.::::: ::::..::::..:..:::.:::::::.:::::::.:. XP_005 ILHLSNSTCGHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRA 230 240 250 260 270 280 410 420 430 pF1KE3 HLPNIKVHAYFAPVTPPPSVGGSRQRFCRCCIIL .::..:::::::::::: .:.:: ::.::::.:: XP_005 QLPHVKVHAYFAPVTPPTAVAGSGQRLCRCCVIL 290 300 310 >>NP_001165184 (OMIM: 605652) F-box/LRR-repeat protein 2 (355 aa) initn: 1340 init1: 1215 opt: 1215 Z-score: 1324.9 bits: 254.0 E(85289): 4.6e-67 Smith-Waterman score: 1863; 65.6% identity (79.6% similar) in 422 aa overlap (15-436:2-355) 10 20 30 40 50 60 pF1KE3 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL .:::.::..::::::::::::::::::.::::::::.:.:::.::: NP_001 MVFSNNDEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILAL 10 20 30 40 70 80 90 100 110 120 pF1KE3 DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIE :::::::::::.:: :.::::::::::::::::::::::::.::::..:.:::::::::: NP_001 DGSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIE 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 VLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCD :::::::: ::.:: :::.:::::.: NP_001 HLNLNGCTKITDSTCYSLSRFCSKLKH--------------------------------- 110 120 130 190 200 210 220 230 240 pF1KE3 QVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLI : .: :::.::::.: .:::::.. NP_001 -----------------------------------IQNYCHELVSLNLQSCSRITDEGVV 140 150 250 260 270 280 290 300 pF1KE3 TICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE ::::::.::.:: :::::.::: :.::: :::::.:::.::::.:::.::: ::::::: NP_001 QICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHE 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE3 LEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIE :::::::::. ::::::::::::::.::.:::::::::::::: ::.:..:.:..:.:.: NP_001 LEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHERLRVLE 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE3 LDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP :::: ::::..::::..:..:::.:::::::.:::::::.:..::..:::::::::::: NP_001 LDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPT 280 290 300 310 320 330 430 pF1KE3 SVGGSRQRFCRCCIIL .:.:: ::.::::.:: NP_001 AVAGSGQRLCRCCVIL 340 350 >>XP_005265072 (OMIM: 605652) PREDICTED: F-box/LRR-repea (349 aa) initn: 1964 init1: 1075 opt: 1124 Z-score: 1226.3 bits: 235.7 E(85289): 1.4e-61 Smith-Waterman score: 1578; 68.4% identity (84.8% similar) in 335 aa overlap (133-436:15-349) 110 120 130 140 150 160 pF1KE3 GVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLK .:: :::.:::::.::::.::.:::: ::: XP_005 MDAQKSLTVRLLFFSTCYSLSRFCSKLKHLDLTSCVSITNSSLK 10 20 30 40 170 180 190 200 210 220 pF1KE3 ALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPE ..:::: :: ::.:::::.:::::.:::::: :::::.:.:::::::::::.: .: : XP_005 GISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHE 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE3 LVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVAR ::.::::.: .:::::.. ::::::.::.:: :::::.::: :.::: :::::.:::.:: XP_005 LVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAAR 110 120 130 140 150 160 290 300 310 320 330 pF1KE3 CSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVL------------ ::.:::.::: ::::::::::::::::. ::::::::::::::.::.: XP_005 CSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALVSLSFSDIIHLL 170 180 190 200 210 220 340 350 360 370 pF1KE3 -------------------SLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDAS ::::::::::::: ::.:..:.:..:.:.::::: ::::.. XP_005 KMKEPSHHNKKLFGFSFCKSLSHCELITDDGILHLSNSTCGHERLRVLELDNCLLITDVA 230 240 250 260 270 280 380 390 400 410 420 430 pF1KE3 LEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRFCR ::::..:..:::.:::::::.:::::::.:..::..:::::::::::: .:.:: ::.:: XP_005 LEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYFAPVTPPTAVAGSGQRLCR 290 300 310 320 330 340 pF1KE3 CCIIL ::.:: XP_005 CCVIL 436 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:27:09 2016 done: Sun Nov 6 08:27:10 2016 Total Scan time: 7.490 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]