FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2226, 353 aa 1>>>pF1KE2226 353 - 353 aa - 353 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2857+/-0.00066; mu= 17.1701+/- 0.040 mean_var=75.2506+/-14.640, 0's: 0 Z-trim(111.5): 11 B-trim: 0 in 0/50 Lambda= 0.147849 statistics sampled from 12407 (12411) to 12407 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.381), width: 16 Scan time: 2.970 The best scores are: opt bits E(32554) CCDS32631.1 MRM1 gene_id:79922|Hs108|chr17 ( 353) 2371 514.6 4.9e-146 >>CCDS32631.1 MRM1 gene_id:79922|Hs108|chr17 (353 aa) initn: 2371 init1: 2371 opt: 2371 Z-score: 2735.2 bits: 514.6 E(32554): 4.9e-146 Smith-Waterman score: 2371; 100.0% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE2 MALLSTVRGATWGRLVTRHFSHAARHGERPGGEELSRLLLDDLVPTSRLELLFGMTPCLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MALLSTVRGATWGRLVTRHFSHAARHGERPGGEELSRLLLDDLVPTSRLELLFGMTPCLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ALQAARRSVARLLLQAGKAGLQGKRAELLRMAEARDIPVLRPRRQKLDTMCRYQVHQGVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ALQAARRSVARLLLQAGKAGLQGKRAELLRMAEARDIPVLRPRRQKLDTMCRYQVHQGVC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 MEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPRNFGAVLRSAHFLGVDKVITSRRN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 SCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 MSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILL 250 260 270 280 290 300 310 320 330 340 350 pF1KE2 HSICSQRKGFPTEGERRQLLQDPQEPSARSEGLSMAQHPGLSSGPEKERQNEG ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 HSICSQRKGFPTEGERRQLLQDPQEPSARSEGLSMAQHPGLSSGPEKERQNEG 310 320 330 340 350 353 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:52:11 2016 done: Mon Nov 7 15:52:12 2016 Total Scan time: 2.970 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]