Result of FASTA (ccds) for
pFN21AE2199
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2199, 93 aa
1>>>pF1KE2199 93 - 93 aa - 93 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8104+/-0.000615; mu= 11.2306+/- 0.037
mean_var=54.8164+/-10.824, 0's: 0 Z-trim(110.9): 48 B-trim: 197 in 1/48
Lambda= 0.173228
statistics sampled from 11904 (11953) to 11904 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.367), width: 16
Scan time: 1.520
The best scores are: opt bits E(32554)
CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 ( 93) 619 161.8 5.5e-41
CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 ( 92) 574 150.5 1.3e-37
CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 ( 92) 418 111.6 7.3e-26
CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 ( 87) 379 101.8 6e-23
CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 ( 89) 371 99.8 2.4e-22
CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 ( 91) 338 91.6 7.5e-20
CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 ( 93) 323 87.8 1e-18
CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17 ( 109) 290 79.6 3.6e-16
CCDS77002.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 96) 277 76.3 3e-15
CCDS77000.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 103) 273 75.4 6.5e-15
CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17 ( 98) 272 75.1 7.4e-15
CCDS77001.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 103) 270 74.6 1.1e-14
CCDS76999.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 64) 266 73.5 1.5e-14
CCDS77004.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 64) 266 73.5 1.5e-14
CCDS77003.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 86) 266 73.6 1.9e-14
CCDS11280.1 CCL8 gene_id:6355|Hs108|chr17 ( 99) 248 69.1 4.8e-13
CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17 ( 99) 248 69.1 4.8e-13
CCDS59282.1 CCL23 gene_id:6368|Hs108|chr17 ( 120) 247 68.9 6.6e-13
CCDS11304.1 CCL15 gene_id:6359|Hs108|chr17 ( 113) 243 67.9 1.3e-12
CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7 ( 94) 241 67.3 1.5e-12
CCDS11303.1 CCL16 gene_id:6360|Hs108|chr17 ( 120) 240 67.1 2.2e-12
CCDS11277.1 CCL2 gene_id:6347|Hs108|chr17 ( 99) 237 66.3 3.2e-12
CCDS11305.1 CCL23 gene_id:6368|Hs108|chr17 ( 137) 238 66.7 3.5e-12
CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17 ( 97) 231 64.8 8.9e-12
CCDS34670.1 CCL24 gene_id:6369|Hs108|chr7 ( 119) 224 63.1 3.5e-11
>>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 (93 aa)
initn: 619 init1: 619 opt: 619 Z-score: 849.2 bits: 161.8 E(32554): 5.5e-41
Smith-Waterman score: 619; 100.0% identity (100.0% similar) in 93 aa overlap (1-93:1-93)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
10 20 30 40 50 60
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:::::::::::::::::::::::::::::::::
CCDS32 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
70 80 90
>>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 (92 aa)
initn: 572 init1: 460 opt: 574 Z-score: 788.5 bits: 150.5 E(32554): 1.3e-37
Smith-Waterman score: 574; 94.6% identity (97.8% similar) in 93 aa overlap (1-93:1-92)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:::::::::::::::::::: .:: :::::::::::::::::::::::::::::::::::
CCDS11 MQVSTAALAVLLCTMALCNQ-FSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
10 20 30 40 50
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:.:::::::.:::::::::::::::::::::::
CCDS11 PGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA
60 70 80 90
>>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 (92 aa)
initn: 413 init1: 378 opt: 418 Z-score: 577.8 bits: 111.6 E(32554): 7.3e-26
Smith-Waterman score: 418; 58.7% identity (90.2% similar) in 92 aa overlap (1-92:1-92)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:.. ...:..:. . :.:. .::::...: :::::::::.:..:.::..::.:::: ::.
CCDS11 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:.:.: :::..:::::::: :::.:: ::::.
CCDS11 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN
70 80 90
>>CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 (87 aa)
initn: 372 init1: 229 opt: 379 Z-score: 525.5 bits: 101.8 E(32554): 6e-23
Smith-Waterman score: 379; 55.4% identity (85.9% similar) in 92 aa overlap (1-92:1-87)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:.. ...:..:. . :.:. .::::...: :::::::::.:..:.::..::.:::: ::.
CCDS32 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:.:. :.:::::::: :::.:: ::::.
CCDS32 PAVV-----GKQVCADPSESWVQEYVYDLELN
70 80
>>CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 (89 aa)
initn: 385 init1: 319 opt: 371 Z-score: 514.6 bits: 99.8 E(32554): 2.4e-22
Smith-Waterman score: 371; 60.2% identity (79.6% similar) in 93 aa overlap (1-93:1-89)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:. .::: ::.:::::: : .. . ::. ::: ::::.::.:: ::: :: :
CCDS11 MKGLAAALLVLVCTMALC----SCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPK
10 20 30 40 50
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:.::.:::::::.::::...:::::.:::.:.:
CCDS11 PGVILLTKRGRQICADPNKKWVQKYISDLKLNA
60 70 80
>>CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 (91 aa)
initn: 339 init1: 260 opt: 338 Z-score: 469.9 bits: 91.6 E(32554): 7.5e-20
Smith-Waterman score: 338; 48.9% identity (83.7% similar) in 92 aa overlap (1-92:1-91)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:.::.:::::.: . ::: . ..: ..:: : :::.: .: .:. : .:: ::..::.
CCDS11 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN
10 20 30 40 50
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:.:.:.:...:::::.: ..::..:...::.:
CCDS11 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS
60 70 80 90
>>CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 (93 aa)
initn: 325 init1: 307 opt: 323 Z-score: 449.5 bits: 87.8 E(32554): 1e-18
Smith-Waterman score: 323; 47.3% identity (82.4% similar) in 91 aa overlap (1-90:1-91)
10 20 30 40 50
pF1KE2 MQVSTAALAV-LLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCS
:..:.::. :: :.:: ... :. . :. :::.::. .::.. : ::.::.::::
CCDS32 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS
10 20 30 40 50 60
60 70 80 90
pF1KE2 KPSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
::...:.::::..::..::..::: :..:..
CCDS32 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
70 80 90
>>CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17 (109 aa)
initn: 310 init1: 279 opt: 290 Z-score: 403.9 bits: 79.6 E(32554): 3.6e-16
Smith-Waterman score: 290; 55.0% identity (91.7% similar) in 60 aa overlap (31-90:48-107)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:. :::.::. .::.. : ::.::.:::::
CCDS45 LGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSK
20 30 40 50 60 70
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:...:.::::..::..::..::: :..:..
CCDS45 PGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
80 90 100
>>CCDS77002.1 CCL4L2 gene_id:9560|Hs108|chr17 (96 aa)
initn: 272 init1: 229 opt: 277 Z-score: 387.1 bits: 76.3 E(32554): 3e-15
Smith-Waterman score: 277; 45.7% identity (79.0% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:.. ...:..:. . :.:. .::::...: :::::::::.:..:.::..::.:::: ::.
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE2 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
:.:. : .. : : :
CCDS77 PAVVAAPGRIPSTRAAPHGPWSGRGRCLPQARDKAR
70 80 90
>>CCDS77000.1 CCL4L2 gene_id:9560|Hs108|chr17 (103 aa)
initn: 264 init1: 229 opt: 273 Z-score: 381.3 bits: 75.4 E(32554): 6.5e-15
Smith-Waterman score: 273; 46.9% identity (80.2% similar) in 81 aa overlap (1-77:1-81)
10 20 30 40 50 60
pF1KE2 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
:.. ...:..:. . :.:. .::::...: :::::::::.:..:.::..::.:::: ::.
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE2 PSVIFLTKRGR--QVCA--DPSEEWVQKYVSDLELSA
:.:. .: : :. ::
CCDS77 PAVVEWKLQGVCFQCCSGKDPIHQSCPTWTMVRQRKMPTTGKG
70 80 90 100
93 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:37:06 2016 done: Sun Nov 6 06:37:06 2016
Total Scan time: 1.520 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]