FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6469, 530 aa 1>>>pF1KE6469 530 - 530 aa - 530 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0330+/-0.000537; mu= 14.2174+/- 0.033 mean_var=74.0940+/-14.158, 0's: 0 Z-trim(106.7): 53 B-trim: 0 in 0/50 Lambda= 0.148999 statistics sampled from 14761 (14793) to 14761 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.518), E-opt: 0.2 (0.173), width: 16 Scan time: 5.990 The best scores are: opt bits E(85289) NP_006575 (OMIM: 610730) T-complex protein 1 subun ( 530) 3350 730.4 3.3e-210 NP_001753 (OMIM: 104613) T-complex protein 1 subun ( 531) 2959 646.3 6.5e-185 XP_016879512 (OMIM: 610730) PREDICTED: T-complex p ( 464) 2956 645.7 9e-185 NP_001180459 (OMIM: 610730) T-complex protein 1 su ( 485) 2688 588.1 2.1e-167 XP_011522505 (OMIM: 610730) PREDICTED: T-complex p ( 388) 2495 546.5 5.2e-155 NP_001009186 (OMIM: 104613) T-complex protein 1 su ( 486) 2330 511.1 3e-144 XP_016879513 (OMIM: 610730) PREDICTED: T-complex p ( 351) 1860 410.0 5.9e-114 NP_001180458 (OMIM: 610730) T-complex protein 1 su ( 493) 1860 410.1 8e-114 NP_005989 (OMIM: 600114) T-complex protein 1 subun ( 545) 890 201.6 5.1e-51 NP_036205 (OMIM: 256840,610150) T-complex protein ( 541) 847 192.3 3.1e-48 NP_001293082 (OMIM: 256840,610150) T-complex prote ( 520) 840 190.8 8.4e-48 NP_001293085 (OMIM: 256840,610150) T-complex prote ( 503) 836 190.0 1.5e-47 NP_006421 (OMIM: 605142) T-complex protein 1 subun ( 539) 815 185.5 3.6e-46 NP_001008800 (OMIM: 600114) T-complex protein 1 su ( 507) 755 172.6 2.6e-42 NP_110379 (OMIM: 186980) T-complex protein 1 subun ( 556) 741 169.6 2.3e-41 NP_006420 (OMIM: 605140) T-complex protein 1 subun ( 543) 670 154.3 8.8e-37 NP_001293083 (OMIM: 256840,610150) T-complex prote ( 486) 638 147.4 9.3e-35 NP_001293084 (OMIM: 256840,610150) T-complex prote ( 448) 634 146.5 1.6e-34 NP_001243650 (OMIM: 605142) T-complex protein 1 su ( 509) 626 144.8 5.8e-34 NP_006422 (OMIM: 605139) T-complex protein 1 subun ( 535) 614 142.3 3.6e-33 NP_001159757 (OMIM: 605140) T-complex protein 1 su ( 499) 610 141.4 6.2e-33 XP_011530780 (OMIM: 605140) PREDICTED: T-complex p ( 499) 610 141.4 6.2e-33 XP_011530781 (OMIM: 605140) PREDICTED: T-complex p ( 499) 610 141.4 6.2e-33 NP_001185771 (OMIM: 605139) T-complex protein 1 su ( 488) 542 126.8 1.5e-28 NP_001159756 (OMIM: 605140) T-complex protein 1 su ( 456) 519 121.8 4.4e-27 NP_001008897 (OMIM: 186980) T-complex protein 1 su ( 401) 487 114.9 4.6e-25 NP_001009570 (OMIM: 605140) T-complex protein 1 su ( 339) 404 97.0 9.4e-20 NP_078961 (OMIM: 610148,615987) Bardet-Biedl syndr ( 723) 157 44.1 0.0018 NP_955472 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 146 41.7 0.0074 NP_002147 (OMIM: 118190,605280,612233) 60 kDa heat ( 573) 146 41.7 0.0074 >>NP_006575 (OMIM: 610730) T-complex protein 1 subunit z (530 aa) initn: 3350 init1: 3350 opt: 3350 Z-score: 3895.0 bits: 730.4 E(85289): 3.3e-210 Smith-Waterman score: 3350; 99.6% identity (100.0% similar) in 530 aa overlap (1-530:1-530) 10 20 30 40 50 60 pF1KE6 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDG ::::::::::::::::.::::::::::::::::::::::::::::::.:::::::::::: NP_006 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 430 440 450 460 470 480 490 500 510 520 530 pF1KE6 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK :::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 490 500 510 520 530 >>NP_001753 (OMIM: 104613) T-complex protein 1 subunit z (531 aa) initn: 2959 init1: 2959 opt: 2959 Z-score: 3440.7 bits: 646.3 E(85289): 6.5e-185 Smith-Waterman score: 2959; 85.8% identity (95.8% similar) in 530 aa overlap (1-530:1-530) 10 20 30 40 50 60 pF1KE6 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDG :::.:..: ::::::::::::::: ::::::::::::::::::::::.:::::::::::: NP_001 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA :::: :::::::::::::::::::::.::::::::::::::::::::::::::::::::. NP_001 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR ::::::: :::. ::::::..:: :. :.:::::::.:::::::::::::.::::.::.. NP_001 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE . ::::::.:::::::: :::.::.::::::::::::::::::::.:: :::::::: NP_001 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF :::::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::::::::::: NP_001 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF :::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::::::::::: NP_001 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE ::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::::.:::::: NP_001 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD ::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: :: :::::: NP_001 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 430 440 450 460 470 480 490 500 510 520 530 pF1KE6 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK ::::::::::..:::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG 490 500 510 520 530 >>XP_016879512 (OMIM: 610730) PREDICTED: T-complex prote (464 aa) initn: 2956 init1: 2956 opt: 2956 Z-score: 3438.2 bits: 645.7 E(85289): 9e-185 Smith-Waterman score: 2956; 100.0% identity (100.0% similar) in 464 aa overlap (67-530:1-464) 40 50 60 70 80 90 pF1KE6 NLGPKGTMKMLASGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNV :::::::::::::::::::::::::::::: XP_016 MQIQHPTASLIAKVATAQDDVTGDGTTSNV 10 20 30 100 110 120 130 140 150 pF1KE6 LIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIIGELLKQADLYISEGLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE6 QTKVHAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QTKVHAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE6 RHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIID 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE6 LKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSF 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE6 EDLTVDCLGHAGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EDLTVDCLGHAGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLR 280 290 300 310 320 330 400 410 420 430 440 450 pF1KE6 AIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAG 340 350 360 370 380 390 460 470 480 490 500 510 pF1KE6 YDPQETLVKVQAEHVESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YDPQETLVKVQAEHVESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNIL 400 410 420 430 440 450 520 530 pF1KE6 LVDEIMRAGMSSLK :::::::::::::: XP_016 LVDEIMRAGMSSLK 460 >>NP_001180459 (OMIM: 610730) T-complex protein 1 subuni (485 aa) initn: 2676 init1: 2676 opt: 2688 Z-score: 3126.6 bits: 588.1 E(85289): 2.1e-167 Smith-Waterman score: 2977; 91.1% identity (91.5% similar) in 530 aa overlap (1-530:1-485) 10 20 30 40 50 60 pF1KE6 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDG ::::::::::::::::.::::::::::::::::::::::::::::::.:::::::::::: NP_001 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA ::::::: :::::::: NP_001 NVLLDEM---------------------------------------------GLHPRIIA 70 130 140 150 160 170 180 pF1KE6 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE6 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE6 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE6 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE6 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE6 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 380 390 400 410 420 430 490 500 510 520 530 pF1KE6 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 440 450 460 470 480 >>XP_011522505 (OMIM: 610730) PREDICTED: T-complex prote (388 aa) initn: 2495 init1: 2495 opt: 2495 Z-score: 2903.9 bits: 546.5 E(85289): 5.2e-155 Smith-Waterman score: 2495; 100.0% identity (100.0% similar) in 388 aa overlap (143-530:1-388) 120 130 140 150 160 170 pF1KE6 GLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVV :::::::::::::::::::::::::::::: XP_011 MKRKILLDVARTSLQTKVHAELADVLTEVV 10 20 30 180 190 200 210 220 230 pF1KE6 VDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILI 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE6 CNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVI 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE6 NQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYE 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE6 YTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAG 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE6 AIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVE 280 290 300 310 320 330 480 490 500 510 520 530 pF1KE6 SKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 340 350 360 370 380 >>NP_001009186 (OMIM: 104613) T-complex protein 1 subuni (486 aa) initn: 2319 init1: 2319 opt: 2330 Z-score: 2710.6 bits: 511.1 E(85289): 3e-144 Smith-Waterman score: 2587; 77.5% identity (87.4% similar) in 530 aa overlap (1-530:1-485) 10 20 30 40 50 60 pF1KE6 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDG :::.:..: ::::::::::::::: ::::::::::::::::::::::.:::::::::::: NP_001 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA :::: :: :::::::. NP_001 NVLLHEM---------------------------------------------GLHPRIIT 70 130 140 150 160 170 180 pF1KE6 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR ::::::: :::. ::::::..:: :. :.:::::::.:::::::::::::.::::.::.. NP_001 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE6 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE . ::::::.:::::::: :::.::.::::::::::::::::::::.:: :::::::: NP_001 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE6 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF :::::::::::.:::.:::::::::::::::.:::.:: :::..:.:::::::::::::: NP_001 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE6 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF :::.:.:.::::::::::::::::.:::::.:.:::.::. ::::::::::::::::::: NP_001 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE6 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE ::::.: :: :::::.::::::::::.:::.::::::.::::.:::.::::::.:::::: NP_001 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE6 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD ::. .: :.::::.::::::::::::::::::::.:.: ::::::.:::: :: :::::: NP_001 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 380 390 400 410 420 430 490 500 510 520 530 pF1KE6 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK ::::::::::..:::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG 440 450 460 470 480 >>XP_016879513 (OMIM: 610730) PREDICTED: T-complex prote (351 aa) initn: 1860 init1: 1860 opt: 1860 Z-score: 2166.9 bits: 410.0 E(85289): 5.9e-114 Smith-Waterman score: 2166; 90.5% identity (90.5% similar) in 388 aa overlap (143-530:1-351) 120 130 140 150 160 170 pF1KE6 GLHPRIIAEGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVV :::::::::::::::::::::::::::::: XP_016 MKRKILLDVARTSLQTKVHAELADVLTEVV 10 20 30 180 190 200 210 220 230 pF1KE6 VDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILI ::::::::::::::::::::::::::::::::: XP_016 VDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTK--------------------------- 40 50 60 240 250 260 270 280 290 pF1KE6 CNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVI :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ----------EVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVI 70 80 90 100 110 300 310 320 330 340 350 pF1KE6 NQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYE 120 130 140 150 160 170 360 370 380 390 400 410 pF1KE6 YTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAG 180 190 200 210 220 230 420 430 440 450 460 470 pF1KE6 AIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVE 240 250 260 270 280 290 480 490 500 510 520 530 pF1KE6 SKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 300 310 320 330 340 350 >>NP_001180458 (OMIM: 610730) T-complex protein 1 subuni (493 aa) initn: 1860 init1: 1860 opt: 1860 Z-score: 2164.5 bits: 410.1 E(85289): 8e-114 Smith-Waterman score: 3021; 92.6% identity (93.0% similar) in 530 aa overlap (1-530:1-493) 10 20 30 40 50 60 pF1KE6 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKDG ::::::::::::::::.::::::::::::::::::::::::::::::.:::::::::::: NP_001 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE ::::::::::::::::::::::::: NP_001 RPGYPIDLFMVEIMEMKHKLGTDTK----------------------------------- 190 200 250 260 270 280 290 300 pF1KE6 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 --EVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE6 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE6 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE6 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 390 400 410 420 430 440 490 500 510 520 530 pF1KE6 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 450 460 470 480 490 >>NP_005989 (OMIM: 600114) T-complex protein 1 subunit g (545 aa) initn: 781 init1: 321 opt: 890 Z-score: 1036.9 bits: 201.6 E(85289): 5.1e-51 Smith-Waterman score: 890; 29.8% identity (67.3% similar) in 523 aa overlap (8-522:13-523) 10 20 30 40 50 pF1KE6 MAAIKAVNSKAEVAR-AQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDI :.: : .: .:.. :: ::. . :..:: ::::. :::: . : : NP_005 MMGHRPVLVLSQNTKRESGRKVQSG---NINAAKTIADIIRTCLGPKSMMKMLLDPMGGI 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 KLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGL .:.:::..: :.:.:::.:. . ... .::. .:::::: ... ::.:. :. .. . . NP_005 VMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQM 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 HPRIIAEGFEAAKIKALEVLEEVKVTKEMKRK-ILLDVARTSLQTKVHAELADVLTEVVV :: .. ... : . .:..... ... . ..:.. .:. ::. .. ... .... NP_005 HPTVVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIAL 120 130 140 150 160 170 180 190 200 210 220 pF1KE6 DSVLAVR--RPGYP-IDLF-MVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAF :.: :. . : ::. .... .. . :. ...:..... . :: :.. ... NP_005 DAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPR 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE6 ILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGF :.. . ::::.: : .. . :. .... :...:.. . ::.:: : NP_005 IVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDV-------- 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 VVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGH-AG ::..:::. .. : . .:.:.::... . .:.. :::. :. :.: : .: :: NP_005 -VITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAG 290 300 310 320 330 340 350 360 370 380 390 400 pF1KE6 LVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMV :. .:.: :::: .: .: . :.:..: .:. :..:. ..:.... .:.. : .: NP_005 LLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLV 350 360 370 380 390 400 410 420 430 440 450 460 pF1KE6 PGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQA ::.:: :.:.:.::. .... : . .: :.:: .::..: :: : . . :....: NP_005 PGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRA 410 420 430 440 450 460 470 480 490 500 510 520 pF1KE6 EHV-ESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMS .:. :. . ::. .:: . . :.:. :: : .. . :. .: .:.:. NP_005 KHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKK 470 480 490 500 510 520 530 pF1KE6 SLK NP_005 KGDDQSRQGGAPDAGQE 530 540 >>NP_036205 (OMIM: 256840,610150) T-complex protein 1 su (541 aa) initn: 731 init1: 311 opt: 847 Z-score: 987.0 bits: 192.3 E(85289): 3.1e-48 Smith-Waterman score: 847; 32.7% identity (66.0% similar) in 523 aa overlap (19-527:33-539) 10 20 30 40 pF1KE6 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLA :: .: ::... ...::.:::.: ::.. NP_036 SMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMV 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 SGAGDIKLTKDGNVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADL . ::. .:.:: ..:. :...: :.:..... .::: :::::. :.. : ::..:. NP_036 DKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQ 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 YISEGLHPRIIAEGFEAAKIKALEVLEEVK--VTKEMK-RKILLDVARTSLQTKVHAELA ...:.:: ::.:.: : :.: :.... : ..: . :...:.:.: .:: NP_036 LLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCH 130 140 150 160 170 180 170 180 190 200 210 pF1KE6 DVLTEVVVDSVLAV----RRPGYPIDLFMVEIMEMKHKLG---TDTKLIQGLVLDHGARH ..:..:..::.: :: .:. :..... :.: :::::.:...:. : NP_036 RQMAEIAVNAVLTVADMERR---DVDF---ELIKVEGKVGGRLEDTKLIKGVIVDKDFSH 190 200 210 220 230 220 230 240 250 260 270 pF1KE6 PDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLK :.: :.:::: : : . .: : ... . ..:. . : : :.. .:. .:.: NP_036 PQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQI---- 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE6 DKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFED . . . ..: : :.: . : .... :.: . ..: ...: :: : : . NP_036 -----KETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSE 300 310 320 330 340 340 350 360 370 380 390 pF1KE6 LTVDCLGHAGLVYEYTLG--EEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLR ::.. :: :::: : ..: ..:. ::.: : .::....: :: . ..: ...:.: NP_036 LTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALC 350 360 370 380 390 400 400 410 420 430 440 450 pF1KE6 AIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAG .:.: :.:. .: :.:: :.. : :. .. . ...:::::: .:: .:..:.: NP_036 VIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSG 410 420 430 440 450 460 460 470 480 490 500 510 pF1KE6 YDPQETLVKVQAEHV-ESKQLVGVD-LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATN ..: .:...:.:..: : . .:.: :. : . . : .. ::: . : .. NP_036 MNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQH-VIETLIGKKQQISLATQMVRM 470 480 490 500 510 520 520 530 pF1KE6 ILLVDEIMRAGMSSLK :: .:.: . : : NP_036 ILKIDDIRKPGESEE 530 540 530 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:36:13 2016 done: Tue Nov 8 13:36:14 2016 Total Scan time: 5.990 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]