FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1610, 115 aa 1>>>pF1KE1610 115 - 115 aa - 115 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7829+/-0.00047; mu= 9.7979+/- 0.029 mean_var=82.2779+/-16.473, 0's: 0 Z-trim(117.7): 5 B-trim: 0 in 0/51 Lambda= 0.141395 statistics sampled from 18491 (18492) to 18491 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.872), E-opt: 0.2 (0.568), width: 16 Scan time: 1.910 The best scores are: opt bits E(32554) CCDS32599.1 TIAF1 gene_id:9220|Hs108|chr17 ( 115) 810 173.0 3.7e-44 >>CCDS32599.1 TIAF1 gene_id:9220|Hs108|chr17 (115 aa) initn: 810 init1: 810 opt: 810 Z-score: 906.3 bits: 173.0 E(32554): 3.7e-44 Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 115 aa overlap (1-115:1-115) 10 20 30 40 50 60 pF1KE1 MSSPSSPFREQSFLCAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MSSPSSPFREQSFLCAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPP 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 APTPPSLSQRVMCNDLFKVNPFQLQQFRADPSTASLLLCPGGLDHKLNLRGKAWG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 APTPPSLSQRVMCNDLFKVNPFQLQQFRADPSTASLLLCPGGLDHKLNLRGKAWG 70 80 90 100 110 115 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:15:37 2016 done: Sun Nov 6 12:15:37 2016 Total Scan time: 1.910 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]