FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6623, 318 aa 1>>>pF1KE6623 318 - 318 aa - 318 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5777+/-0.000301; mu= 10.9444+/- 0.019 mean_var=97.8680+/-19.721, 0's: 0 Z-trim(118.5): 2 B-trim: 0 in 0/56 Lambda= 0.129644 statistics sampled from 31495 (31497) to 31495 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.369), width: 16 Scan time: 5.660 The best scores are: opt bits E(85289) NP_064708 (OMIM: 612837,614654) ubiquinone biosynt ( 318) 2107 403.8 2.3e-112 >>NP_064708 (OMIM: 612837,614654) ubiquinone biosynthesi (318 aa) initn: 2107 init1: 2107 opt: 2107 Z-score: 2138.2 bits: 403.8 E(85289): 2.3e-112 Smith-Waterman score: 2107; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE6 MAAAAVSGALGRAGWRLLQLRCLPVARCRQALVPRAFHASAVGLRSSDEQKQQPPNSFSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 MAAAAVSGALGRAGWRLLQLRCLPVARCRQALVPRAFHASAVGLRSSDEQKQQPPNSFSQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 QHSETQGAEKPDPESSHSPPRYTDQGGEEEEDYESEEQLQHRILTAALEFVPAHGWTAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 QHSETQGAEKPDPESSHSPPRYTDQGGEEEEDYESEEQLQHRILTAALEFVPAHGWTAEA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 IAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEEEQKLVQLGQAEKRKTDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 IAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEEEQKLVQLGQAEKRKTDQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 FLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 FLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNW 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQVKSTGEALVQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 YTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQVKSTGEALVQG 250 260 270 280 290 300 310 pF1KE6 LMGAAVTLKNLTGLNQRR :::::::::::::::::: NP_064 LMGAAVTLKNLTGLNQRR 310 318 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:52:46 2016 done: Tue Nov 8 14:52:47 2016 Total Scan time: 5.660 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]