FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0744, 424 aa 1>>>pF1KE0744 424 - 424 aa - 424 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4574+/-0.000988; mu= -5.1755+/- 0.058 mean_var=401.6332+/-85.806, 0's: 0 Z-trim(115.6): 520 B-trim: 0 in 0/53 Lambda= 0.063997 statistics sampled from 15561 (16169) to 15561 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.497), width: 16 Scan time: 3.580 The best scores are: opt bits E(32554) CCDS32416.1 SBK1 gene_id:388228|Hs108|chr16 ( 424) 2909 282.5 5.3e-76 CCDS42631.1 SBK2 gene_id:646643|Hs108|chr19 ( 348) 734 81.6 1.3e-15 CCDS74457.1 SBK3 gene_id:100130827|Hs108|chr19 ( 359) 674 76.1 6.2e-14 >>CCDS32416.1 SBK1 gene_id:388228|Hs108|chr16 (424 aa) initn: 2909 init1: 2909 opt: 2909 Z-score: 1478.0 bits: 282.5 E(32554): 5.3e-76 Smith-Waterman score: 2909; 100.0% identity (100.0% similar) in 424 aa overlap (1-424:1-424) 10 20 30 40 50 60 pF1KE0 MSVGCPEPEPPRSLTCCGPGTAPGPGAGVPLLTEDMQALTLRTLAASDVTKHYELVRELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MSVGCPEPEPPRSLTCCGPGTAPGPGAGVPLLTEDMQALTLRTLAASDVTKHYELVRELG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 KGTYGKVDLVVYKGTGTKMALKFVNKSKTKLKNFLREVSITNSLSSSPFIIKVFDVVFET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KGTYGKVDLVVYKGTGTKMALKFVNKSKTKLKNFLREVSITNSLSSSPFIIKVFDVVFET 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 EDCYVFAQEYAPAGDLFDIIPPQVGLPEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EDCYVFAQEYAPAGDLFDIIPPQVGLPEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 LLFDRECRRVKLADFGMTRRVGCRVKRVSGTIPYTAPEVCQAGRADGLAVDTGVDVWAFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LLFDRECRRVKLADFGMTRRVGCRVKRVSGTIPYTAPEVCQAGRADGLAVDTGVDVWAFG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 VLIFCVLTGNFPWEAASGADAFFEEFVRWQRGRLPGLPSQWRRFTEPALRMFQRLLALEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VLIFCVLTGNFPWEAASGADAFFEEFVRWQRGRLPGLPSQWRRFTEPALRMFQRLLALEP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 ERRGPAKEVFRFLKHELTSELRRRPSHRARKPPGDRPPAAGPLRLEAPGPLKRTVLTESG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ERRGPAKEVFRFLKHELTSELRRRPSHRARKPPGDRPPAAGPLRLEAPGPLKRTVLTESG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 SGSRPAPPAVGSVPLPVPVPVPVPVPVPVPEPGLAPQGPPGRTDGRADKSKGQVVLATAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SGSRPAPPAVGSVPLPVPVPVPVPVPVPVPEPGLAPQGPPGRTDGRADKSKGQVVLATAI 370 380 390 400 410 420 pF1KE0 EICV :::: CCDS32 EICV >>CCDS42631.1 SBK2 gene_id:646643|Hs108|chr19 (348 aa) initn: 711 init1: 539 opt: 734 Z-score: 393.8 bits: 81.6 E(32554): 1.3e-15 Smith-Waterman score: 734; 42.9% identity (69.6% similar) in 273 aa overlap (34-303:43-315) 10 20 30 40 50 60 pF1KE0 GCPEPEPPRSLTCCGPGTAPGPGAGVPLLTEDMQALTLRTLAASDVTKHYELVRELGKGT :::..:. .::. ..: . :: :: ::.: CCDS42 AGASEDSEEEGLGGLTLEELQQGQEAARALEDMMTLSAQTLVRAEVDELYEEVRPLGQGC 20 30 40 50 60 70 70 80 90 100 110 120 pF1KE0 YGKVDLVVYKGTGTKMALKFVNKSKTKLKNFLREVSITNSLSSSPFIIKVFDVVFETEDC ::.: ::... :: .::: . : .:.:..:: : . ::.. :. .. . .:. CCDS42 YGRVLLVTHRQKGTPLALKQLPKPRTSLRGFLYEFCVGLSLGAHSAIVTAYGIGIESAHS 80 90 100 110 120 130 130 140 150 160 170 180 pF1KE0 YVFAQEYAPAGDLFDIIPPQVGLPEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENVLLF : : : . :::. .: :.::::. .:.::. ::. ::...:.: ::.::.::::::. CCDS42 YSFLTEPVLHGDLMAFIQPKVGLPQPAVHRCAAQLASALEYIHARGLVYRDLKPENVLVC 140 150 160 170 180 190 190 200 210 220 230 240 pF1KE0 DRECRRVKLADFGMTRRVGCRVKRVSGTIPYTAPEVCQAGR-ADGLAVDTGVDVWAFGVL : ::: ::.::: :: : .. .. :::::::.: .:: .. ..:.::.::: CCDS42 DPACRRFKLTDFGHTRPRGTLLRLAGPPIPYTAPELCAPPPLPEGLPIQPALDAWALGVL 200 210 220 230 240 250 250 260 270 280 290 300 pF1KE0 IFCVLTGNFPWEAA-SGADAFFEEFVRWQRGRLP-GLPSQWRRFTEPALRMFQRLLALEP .::.::: :::. . :: :.:.:. :: . : :. : .. : ... :: .: CCDS42 LFCLLTGYFPWDRPLAEADPFYEDFLIWQASGQPRDRPQPWFGLAAAADALLRGLLDPHP 260 270 280 290 300 310 310 320 330 340 350 360 pF1KE0 ERRGPAKEVFRFLKHELTSELRRRPSHRARKPPGDRPPAAGPLRLEAPGPLKRTVLTESG .:: CCDS42 RRRSAVIAIREHLGRPWRQREGEAEAVGAVEEEAGQ 320 330 340 >>CCDS74457.1 SBK3 gene_id:100130827|Hs108|chr19 (359 aa) initn: 672 init1: 390 opt: 674 Z-score: 363.7 bits: 76.1 E(32554): 6.2e-14 Smith-Waterman score: 674; 39.9% identity (65.2% similar) in 276 aa overlap (40-313:30-304) 10 20 30 40 50 60 pF1KE0 PPRSLTCCGPGTAPGPGAGVPLLTEDMQALTLRTLAASDVTKHYELVRELGKGTYGKVDL : :. . .. .:.:.:.::.:.::.: : CCDS74 MERRASETPEDGDPEEDTATALQRLVELTTSRVTPVRSLRDQYHLIRKLGSGSYGRVLL 10 20 30 40 50 70 80 90 100 110 120 pF1KE0 VVYKGTGTKMALKFVNKSKTKLKNFLREVSITNSLSSSPFIIKVFDVVFETEDCYVFAQE . . : .:::.. .. . ..:::: . .:. : ..... ..: ..:::: CCDS74 AQPHQGGPAVALKLLRRDLVLRSTFLREFCVGRCVSAHPGLLQTLAGPLQTPRYFAFAQE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE0 YAPAGDLFDIIPPQVGLPEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENVLLFDRECRR ::: ::: .. . :::: ::: : ::. ::::.:.: ::: :.::.:::.:: : : CCDS74 YAPCGDLSGMLQER-GLPELLVKRVVAQLAGALDFLHSRGLVHADVKPDNVLVFDPVCSR 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE0 VKLADFGMTRRVGCRVKRVSGTIPYTAPEVCQAGRADGLAVDTGVDVWAFGVLIFCVLTG : :.:.:.:: : . .: . ::.: : : . .:: :..:::.::. :. CCDS74 VALGDLGLTRPEGSPTPAPPVPLPTAPPELCLLLPPDTLPLRPAVDSWGLGVLLFCAATA 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE0 NFPWEAASGADAFFEEFVRW--QRGRLPGLPSQWRRFTEPALRMFQRLLALEPERRGPAK :::..: . . :: :. : . . : : : .:. ::: ..: :: :.:: :.: CCDS74 CFPWDVALAPNPEFEAFAGWVTTKPQPPQPPPPWDQFAPPALALLQGLLDLDPETRSPPL 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE0 EVFRFLKHELTSELRRRPSHRARKPPGDRPPAAGPLRLEAPGPLKRTVLTESGSGSRPAP :. :: CCDS74 AVLDFLGDDWGLQGNREGPGVLGSAVSYEDREEGGSSLEEWTDEGDDSKSGGRTGTDGGA 300 310 320 330 340 350 424 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:23:59 2016 done: Sun Nov 6 05:24:00 2016 Total Scan time: 3.580 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]