Result of FASTA (omim) for
pFN21AE1668
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1668, 188 aa
1>>>pF1KE1668 188 - 188 aa - 188 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4251+/-0.000293; mu= 13.1153+/- 0.018
mean_var=78.4272+/-15.196, 0's: 0 Z-trim(119.2): 9 B-trim: 328 in 1/54
Lambda= 0.144824
statistics sampled from 33043 (33052) to 33043 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.388), width: 16
Scan time: 6.360
The best scores are: opt bits E(85289)
NP_001012650 (OMIM: 606001) interleukin-32 isoform ( 188) 1307 281.7 4.7e-76
NP_001012649 (OMIM: 606001) interleukin-32 isoform ( 188) 1307 281.7 4.7e-76
NP_004212 (OMIM: 606001) interleukin-32 isoform B ( 188) 1307 281.7 4.7e-76
NP_001012736 (OMIM: 606001) interleukin-32 isoform ( 188) 1307 281.7 4.7e-76
NP_001295007 (OMIM: 606001) interleukin-32 isoform ( 234) 1183 255.9 3.5e-68
NP_001012653 (OMIM: 606001) interleukin-32 isoform ( 168) 1046 227.1 1.1e-59
NP_001012652 (OMIM: 606001) interleukin-32 isoform ( 168) 1046 227.1 1.1e-59
NP_001012654 (OMIM: 606001) interleukin-32 isoform ( 179) 999 217.3 1.1e-56
NP_001012651 (OMIM: 606001) interleukin-32 isoform ( 131) 732 161.5 5.2e-40
>>NP_001012650 (OMIM: 606001) interleukin-32 isoform B [ (188 aa)
initn: 1307 init1: 1307 opt: 1307 Z-score: 1486.4 bits: 281.7 E(85289): 4.7e-76
Smith-Waterman score: 1307; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
130 140 150 160 170 180
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
>>NP_001012649 (OMIM: 606001) interleukin-32 isoform B [ (188 aa)
initn: 1307 init1: 1307 opt: 1307 Z-score: 1486.4 bits: 281.7 E(85289): 4.7e-76
Smith-Waterman score: 1307; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
130 140 150 160 170 180
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
>>NP_004212 (OMIM: 606001) interleukin-32 isoform B [Hom (188 aa)
initn: 1307 init1: 1307 opt: 1307 Z-score: 1486.4 bits: 281.7 E(85289): 4.7e-76
Smith-Waterman score: 1307; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
130 140 150 160 170 180
pF1KE1 CSEPQSSK
::::::::
NP_004 CSEPQSSK
>>NP_001012736 (OMIM: 606001) interleukin-32 isoform B [ (188 aa)
initn: 1307 init1: 1307 opt: 1307 Z-score: 1486.4 bits: 281.7 E(85289): 4.7e-76
Smith-Waterman score: 1307; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
130 140 150 160 170 180
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
>>NP_001295007 (OMIM: 606001) interleukin-32 isoform E p (234 aa)
initn: 1293 init1: 1183 opt: 1183 Z-score: 1345.0 bits: 255.9 E(85289): 3.5e-68
Smith-Waterman score: 1183; 100.0% identity (100.0% similar) in 170 aa overlap (19-188:65-234)
10 20 30 40
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELED
::::::::::::::::::::::::::::::
NP_001 ACDTEDTVGHLGPWRDKDPALWCQLCLSSQHQAIERFYDKMQNAESGRGQVMSSLAELED
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE1 DFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKV
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE1 MRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGA
160 170 180 190 200 210
170 180
pF1KE1 PRGDKEELTPQKCSEPQSSK
::::::::::::::::::::
NP_001 PRGDKEELTPQKCSEPQSSK
220 230
>>NP_001012653 (OMIM: 606001) interleukin-32 isoform C [ (168 aa)
initn: 1156 init1: 1046 opt: 1046 Z-score: 1192.3 bits: 227.1 E(85289): 1.1e-59
Smith-Waterman score: 1120; 89.4% identity (89.4% similar) in 188 aa overlap (1-188:1-168)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
:::::::::::::::::: ::::::::::::::::::::::
NP_001 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA
10 20 30 40
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
110 120 130 140 150 160
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
>>NP_001012652 (OMIM: 606001) interleukin-32 isoform C [ (168 aa)
initn: 1156 init1: 1046 opt: 1046 Z-score: 1192.3 bits: 227.1 E(85289): 1.1e-59
Smith-Waterman score: 1120; 89.4% identity (89.4% similar) in 188 aa overlap (1-188:1-168)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
:::::::::::::::::: ::::::::::::::::::::::
NP_001 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA
10 20 30 40
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
110 120 130 140 150 160
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
>>NP_001012654 (OMIM: 606001) interleukin-32 isoform D [ (179 aa)
initn: 999 init1: 999 opt: 999 Z-score: 1138.9 bits: 217.3 E(85289): 1.1e-56
Smith-Waterman score: 1230; 95.2% identity (95.2% similar) in 188 aa overlap (1-188:1-179)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
:::::::::::::::::::::::::::::::::::::: :::::::::::::
NP_001 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
120 130 140 150 160 170
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
>>NP_001012651 (OMIM: 606001) interleukin-32 isoform A [ (131 aa)
initn: 732 init1: 732 opt: 732 Z-score: 839.3 bits: 161.5 E(85289): 5.2e-40
Smith-Waterman score: 775; 69.7% identity (69.7% similar) in 188 aa overlap (1-188:1-131)
10 20 30 40 50 60
pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDK-------------
70 80 90 100
130 140 150 160 170 180
pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK
::::::::::::::::
NP_001 --------------------------------------------SYGAPRGDKEELTPQK
110 120
pF1KE1 CSEPQSSK
::::::::
NP_001 CSEPQSSK
130
188 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:20:38 2016 done: Sun Nov 6 12:20:39 2016
Total Scan time: 6.360 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]