FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1668, 188 aa 1>>>pF1KE1668 188 - 188 aa - 188 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5506+/-0.000605; mu= 12.3283+/- 0.036 mean_var=73.9097+/-14.452, 0's: 0 Z-trim(112.4): 5 B-trim: 0 in 0/52 Lambda= 0.149184 statistics sampled from 13121 (13126) to 13121 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.403), width: 16 Scan time: 2.160 The best scores are: opt bits E(32554) CCDS32377.1 IL32 gene_id:9235|Hs108|chr16 ( 188) 1307 289.6 7.4e-79 CCDS76811.1 IL32 gene_id:9235|Hs108|chr16 ( 234) 1183 263.0 9.6e-71 CCDS45394.1 IL32 gene_id:9235|Hs108|chr16 ( 168) 1046 233.4 5.5e-62 CCDS32379.1 IL32 gene_id:9235|Hs108|chr16 ( 179) 999 223.3 6.4e-59 CCDS32378.1 IL32 gene_id:9235|Hs108|chr16 ( 131) 732 165.8 9.8e-42 >>CCDS32377.1 IL32 gene_id:9235|Hs108|chr16 (188 aa) initn: 1307 init1: 1307 opt: 1307 Z-score: 1529.2 bits: 289.6 E(32554): 7.4e-79 Smith-Waterman score: 1307; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188) 10 20 30 40 50 60 pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 130 140 150 160 170 180 pF1KE1 CSEPQSSK :::::::: CCDS32 CSEPQSSK >>CCDS76811.1 IL32 gene_id:9235|Hs108|chr16 (234 aa) initn: 1293 init1: 1183 opt: 1183 Z-score: 1383.6 bits: 263.0 E(32554): 9.6e-71 Smith-Waterman score: 1183; 100.0% identity (100.0% similar) in 170 aa overlap (19-188:65-234) 10 20 30 40 pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELED :::::::::::::::::::::::::::::: CCDS76 ACDTEDTVGHLGPWRDKDPALWCQLCLSSQHQAIERFYDKMQNAESGRGQVMSSLAELED 40 50 60 70 80 90 50 60 70 80 90 100 pF1KE1 DFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DFKEGYLETVAAYYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKV 100 110 120 130 140 150 110 120 130 140 150 160 pF1KE1 MRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGA 160 170 180 190 200 210 170 180 pF1KE1 PRGDKEELTPQKCSEPQSSK :::::::::::::::::::: CCDS76 PRGDKEELTPQKCSEPQSSK 220 230 >>CCDS45394.1 IL32 gene_id:9235|Hs108|chr16 (168 aa) initn: 1156 init1: 1046 opt: 1046 Z-score: 1226.4 bits: 233.4 E(32554): 5.5e-62 Smith-Waterman score: 1120; 89.4% identity (89.4% similar) in 188 aa overlap (1-188:1-168) 10 20 30 40 50 60 pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA :::::::::::::::::: :::::::::::::::::::::: CCDS45 MCFPKVLSDDMKKLKARM--------------------VMSSLAELEDDFKEGYLETVAA 10 20 30 40 70 80 90 100 110 120 pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 110 120 130 140 150 160 pF1KE1 CSEPQSSK :::::::: CCDS45 CSEPQSSK >>CCDS32379.1 IL32 gene_id:9235|Hs108|chr16 (179 aa) initn: 999 init1: 999 opt: 999 Z-score: 1171.3 bits: 223.3 E(32554): 6.4e-59 Smith-Waterman score: 1230; 95.2% identity (95.2% similar) in 188 aa overlap (1-188:1-179) 10 20 30 40 50 60 pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA :::::::::::::::::::::::::::::::::::::: ::::::::::::: CCDS32 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQ---------DDFKEGYLETVAA 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK 120 130 140 150 160 170 pF1KE1 CSEPQSSK :::::::: CCDS32 CSEPQSSK >>CCDS32378.1 IL32 gene_id:9235|Hs108|chr16 (131 aa) initn: 732 init1: 732 opt: 732 Z-score: 862.7 bits: 165.8 E(32554): 9.8e-42 Smith-Waterman score: 775; 69.7% identity (69.7% similar) in 188 aa overlap (1-188:1-131) 10 20 30 40 50 60 pF1KE1 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEDDFKEGYLETVAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQ ::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 YYEEQHPELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDK------------- 70 80 90 100 130 140 150 160 170 180 pF1KE1 TWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQK :::::::::::::::: CCDS32 --------------------------------------------SYGAPRGDKEELTPQK 110 120 pF1KE1 CSEPQSSK :::::::: CCDS32 CSEPQSSK 130 188 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 12:20:37 2016 done: Sun Nov 6 12:20:37 2016 Total Scan time: 2.160 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]