FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4204, 711 aa 1>>>pF1KE4204 711 - 711 aa - 711 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3948+/-0.000848; mu= 15.3829+/- 0.051 mean_var=95.4353+/-18.666, 0's: 0 Z-trim(109.4): 23 B-trim: 5 in 1/48 Lambda= 0.131286 statistics sampled from 10823 (10834) to 10823 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.333), width: 16 Scan time: 2.980 The best scores are: opt bits E(32554) CCDS32086.1 FBXO34 gene_id:55030|Hs108|chr14 ( 711) 4863 931.6 0 CCDS46116.1 FBXO46 gene_id:23403|Hs108|chr19 ( 603) 762 154.8 3.5e-37 >>CCDS32086.1 FBXO34 gene_id:55030|Hs108|chr14 (711 aa) initn: 4863 init1: 4863 opt: 4863 Z-score: 4977.8 bits: 931.6 E(32554): 0 Smith-Waterman score: 4863; 99.7% identity (99.7% similar) in 711 aa overlap (1-711:1-711) 10 20 30 40 50 60 pF1KE4 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 PFGILSPNVLCSMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AFFASHQCSNRIGSMKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ACGIEHCSVHYVSDSGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCGPSRADRCSP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSNLNSCEDPVPG ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: CCDS32 YSQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVES :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: CCDS32 MLFFLPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVES 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TLPVLEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKC 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TCCYFKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPY 610 620 630 640 650 660 670 680 690 700 710 pF1KE4 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY 670 680 690 700 710 >>CCDS46116.1 FBXO46 gene_id:23403|Hs108|chr19 (603 aa) initn: 1014 init1: 747 opt: 762 Z-score: 780.9 bits: 154.8 E(32554): 3.5e-37 Smith-Waterman score: 1011; 34.2% identity (54.7% similar) in 658 aa overlap (49-692:28-590) 20 30 40 50 60 70 pF1KE4 SRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVLCSMSGKSP :::.: .. .: : :. . : ..: CCDS46 MDRGSLLPFQLWCPRPFGTYSQNQPRPPSAALKPSACPEPGGGAEPDHGPAHSENTP 10 20 30 40 50 80 90 100 110 120 130 pF1KE4 VESSLNVKTKKNAPSATIHQGEEEGP--LDIWAVVKPGNTKEKIAFFASHQCS--NRIGS . .: ... :: . . .:: :: : :.::::::::.:::..:::. .: .: CCDS46 PALATEVPASQPAPLLSAAAAGDEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGSRASS 60 70 80 90 100 110 140 150 160 170 180 190 pF1KE4 MKIKSSWDIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSD ::.:. : :. .:::.. : :: :.: . . . .. CCDS46 MKVKGHWGSDSSKAKRRRRCLDPTKAP---------------PDPGGREGPPAAEEGPAS 120 130 140 150 160 200 210 220 230 240 250 pF1KE4 SGDGVYAGRPLSVIQMVAFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAV---SES .:. : ::: .:::..::::. : : . : :: : : . .: :: :: CCDS46 AGEDVDL---LSVAEMVALVEQRAALALQSYPRPTT--PAPVVFVSAEQGGPAKGVGSER 170 180 190 200 210 260 270 280 290 300 310 pF1KE4 YSAPGACEEPTERGNLEVGEPQSEPVRVLDMVAKLESECLKRQGQREPGSLSRNNSFRRN :. : : . .: .. .: :.. :..: .: : :: .:: . CCDS46 RSGGGDCSRVAEAVAHFEAQRDSPPTK------GLRKE--ERPG---PGPGEVRIAFRIS 220 230 240 250 260 320 330 340 350 360 370 pF1KE4 VGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDCG-PSRADRCSPKEDQAWDGAS :: : . :::. . :. :. :. . .:. CCDS46 NGR----------EPR-------APDSGLPSGGGGRPGCAYPGSPGPGARAKDKITCDLY 270 280 290 300 380 390 400 410 420 pF1KE4 QDCPP----LPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHTYSQASE : : ::..: : . :. : .... .. : . : :: CCDS46 QLISPSRDALPSNVEFLLARAD------EASEGDSPAPARPEDTPPAPPPPPARDCGASG 310 320 330 340 350 360 430 440 450 460 470 480 pF1KE4 LPTDAVDCMSRELVSLTSRNPDQ--RKESLCISITVSKVDKDQPSNLNSCEDPVPGMLFF . .:.: . . ... . ..:..:.... : : : ::.::: CCDS46 FHVDVVVTGVVDECIFFGKDGTKNVKEETVCLTVS--------PE-----EPPPPGQLFF 370 380 390 400 410 490 500 510 520 530 540 pF1KE4 LPPGQHLSDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVPPASSVESTLPV : .. . . : :.. : : :.: :.:. ..: CCDS46 L---------QNRGPDGPPEPPPADSPATAPGPDDAE----GTAD----------TSLCR 420 430 440 550 560 570 580 590 600 pF1KE4 LEASSWKKQVSHDFLETRFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCY : ..::::::: :::::.::::.::: .::.:..:::: .:::..:.:::::: . CCDS46 LY-----RHVSHDFLEIRFKIQRLLEPRQYMLLLPEHVLVKIFSFLPTRALAALKCTCHH 450 460 470 480 490 500 610 620 630 640 650 660 pF1KE4 FKFIIEYYNIRPADSRWVRDPRYREDPCKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGY :: ::: ...: .:::: ::: ::.::::::.:.: :::::::::::::: . :::: .: CCDS46 FKGIIEAFGVRATDSRWSRDPLYRDDPCKQCRKRYEKGDVSLCRWHPKPYHHDLPYGRSY 510 520 530 540 550 560 670 680 690 700 710 pF1KE4 WMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHKKAKGTEAEEEY ::::.:... :::.::::::.:: :. CCDS46 WMCCRRADRETPGCRLGLHDNNWVLPCNGPGGGRAGREEGR 570 580 590 600 711 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:30:20 2016 done: Sun Nov 6 01:30:20 2016 Total Scan time: 2.980 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]